RNA–Protein interactions for RNA: ENST00000513629.1

CDK7-210, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-210ENST00000513629 HMGCRP04035 888 aa11.27□□□□□ -0.61
CDK7-210ENST00000513629 HERVK_113P62684 666 aa11.27□□□□□ -0.61
CDK7-210ENST00000513629 MAP3K12Q12852 859 aa11.27□□□□□ -0.61
CDK7-210ENST00000513629 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.27□□□□□ -0.61
CDK7-210ENST00000513629 TXNRD2Q9NNW7 524 aa11.27□□□□□ -0.61
CDK7-210ENST00000513629 GINM1Q9NU53 330 aa11.27□□□□□ -0.61
CDK7-210ENST00000513629 MORF4L1Q9UBU8 362 aa11.27□□□□□ -0.61
CDK7-210ENST00000513629 C19orf81C9J6K1 198 aa11.26□□□□□ -0.61
CDK7-210ENST00000513629 TFRCP02786 760 aaKnown RBP11.26□□□□□ -0.61
CDK7-210ENST00000513629 HOXA7P31268 230 aaPredicted RBP11.26□□□□□ -0.61
CDK7-210ENST00000513629 TRIM32Q13049 653 aa11.26□□□□□ -0.61
CDK7-210ENST00000513629 ZYXQ15942 572 aaKnown RBP11.26□□□□□ -0.61
CDK7-210ENST00000513629 CERS3Q8IU89 383 aa11.26□□□□□ -0.61
CDK7-210ENST00000513629 P2RX7Q99572 595 aaKnown RBP11.26□□□□□ -0.61
CDK7-210ENST00000513629 FEZ1Q99689 392 aa11.26□□□□□ -0.61
CDK7-210ENST00000513629 SERPINB13Q9UIV8 391 aa11.26□□□□□ -0.61
CDK7-210ENST00000513629 GJD2Q9UKL4 321 aa11.26□□□□□ -0.61
CDK7-210ENST00000513629 DDX60LQ5H9U9 1706 aaKnown RBP11.26□□□□□ -0.61
CDK7-210ENST00000513629 MYH1P12882 1939 aa11.25□□□□□ -0.61
CDK7-210ENST00000513629 CYP2B6P20813 491 aa11.25□□□□□ -0.61
CDK7-210ENST00000513629 HSP90AB4PQ58FF6 505 aa11.25□□□□□ -0.61
CDK7-210ENST00000513629 USP17L2Q6R6M4 530 aa11.25□□□□□ -0.61
CDK7-210ENST00000513629 GPRC5AQ8NFJ5 357 aa11.25□□□□□ -0.61
CDK7-210ENST00000513629 RHPN1Q8TCX5 695 aa11.25□□□□□ -0.61
CDK7-210ENST00000513629 DIS3LQ8TF46 1054 aaKnown RBP11.25□□□□□ -0.61
CDK7-210ENST00000513629 SOCS4Q8WXH5 440 aa11.25□□□□□ -0.61
CDK7-210ENST00000513629 TRIB2Q92519 343 aa11.25□□□□□ -0.61
CDK7-210ENST00000513629 GPKOWQ92917 476 aaPredicted RBP eCLIP11.25□□□□□ -0.61
CDK7-210ENST00000513629 RIOK1Q9BRS2 568 aaKnown RBP11.25□□□□□ -0.61
CDK7-210ENST00000513629 PAGR1Q9BTK6 254 aa11.25□□□□□ -0.61
CDK7-210ENST00000513629 BCL11AQ9H165 835 aa11.25□□□□□ -0.61
CDK7-210ENST00000513629 EHD4Q9H223 541 aa11.25□□□□□ -0.61
CDK7-210ENST00000513629 PLXNB2O15031 1838 aa11.24□□□□□ -0.61
CDK7-210ENST00000513629 NAV1Q8NEY1 1877 aa11.24□□□□□ -0.61
CDK7-210ENST00000513629 MAGEB6P1A0A0J9YX57 407 aa11.24□□□□□ -0.61
CDK7-210ENST00000513629 PDE6AP16499 860 aa11.24□□□□□ -0.61
CDK7-210ENST00000513629 ERVK-9P63128 1117 aa11.24□□□□□ -0.61
CDK7-210ENST00000513629 ERVK-24P63145 666 aa11.24□□□□□ -0.61
CDK7-210ENST00000513629 RAB3GAP1Q15042 981 aa11.24□□□□□ -0.61
CDK7-210ENST00000513629 TATDN1Q6P1N9 297 aa11.24□□□□□ -0.61
CDK7-210ENST00000513629 TTC6Q86TZ1 520 aa11.24□□□□□ -0.61
CDK7-210ENST00000513629 KIF1BPQ96EK5 621 aa11.24□□□□□ -0.61
CDK7-210ENST00000513629 PAWRQ96IZ0 340 aaKnown RBP11.24□□□□□ -0.61
CDK7-210ENST00000513629 DNAJC2Q99543 621 aaKnown RBP11.24□□□□□ -0.61
CDK7-210ENST00000513629 PORCNQ9H237 461 aa11.24□□□□□ -0.61
CDK7-210ENST00000513629 RBPJLQ9UBG7 517 aa11.24□□□□□ -0.61
CDK7-210ENST00000513629 NR2E3Q9Y5X4 410 aa11.24□□□□□ -0.61
CDK7-210ENST00000513629 GOLIM4O00461 696 aa11.23□□□□□ -0.61
CDK7-210ENST00000513629 MAPK4P31152 587 aa11.23□□□□□ -0.61
CDK7-210ENST00000513629 SHMT1P34896 483 aa11.23□□□□□ -0.61
CDK7-210ENST00000513629 PLCD1P51178 756 aa11.23□□□□□ -0.61
CDK7-210ENST00000513629 VAC14Q08AM6 782 aa11.23□□□□□ -0.61
CDK7-210ENST00000513629 PDE3AQ14432 1141 aa11.23□□□□□ -0.61
CDK7-210ENST00000513629 TTF1Q15361 905 aaPredicted RBP11.23□□□□□ -0.61
CDK7-210ENST00000513629 ABCB5Q2M3G0 1257 aa11.23□□□□□ -0.61
CDK7-210ENST00000513629 CERKLQ49MI3 558 aaPredicted RBP11.23□□□□□ -0.61
CDK7-210ENST00000513629 SLC9C2Q5TAH2 1124 aa11.23□□□□□ -0.61
CDK7-210ENST00000513629 PDXDC2PQ6P474 469 aa11.23□□□□□ -0.61
CDK7-210ENST00000513629 TMED8Q6PL24 325 aaPredicted RBP11.23□□□□□ -0.61
CDK7-210ENST00000513629 CCAR1Q8IX12 1150 aaKnown RBP11.23□□□□□ -0.61
CDK7-210ENST00000513629 CLASRPQ8N2M8 674 aaKnown RBP11.23□□□□□ -0.61
CDK7-210ENST00000513629 ACER1Q8TDN7 264 aa11.23□□□□□ -0.61
CDK7-210ENST00000513629 GTF3C2Q8WUA4 911 aaPredicted RBP11.23□□□□□ -0.61
CDK7-210ENST00000513629 BAP1Q92560 729 aa11.23□□□□□ -0.61
CDK7-210ENST00000513629 C12orf42Q96LP6 360 aa11.23□□□□□ -0.61
CDK7-210ENST00000513629 DDX19BQ9UMR2 479 aa11.23□□□□□ -0.61
CDK7-210ENST00000513629 RPTORQ8N122 1335 aa11.23□□□□□ -0.61
CDK7-210ENST00000513629 ZBTB24O43167 697 aaPredicted RBP11.22□□□□□ -0.61
CDK7-210ENST00000513629 HMMRO75330 724 aa11.22□□□□□ -0.61
CDK7-210ENST00000513629 POLR3DP05423 398 aaPredicted RBP11.22□□□□□ -0.61
CDK7-210ENST00000513629 IFIT2P09913 472 aaKnown RBP11.22□□□□□ -0.61
CDK7-210ENST00000513629 FBXO45P0C2W1 286 aa11.22□□□□□ -0.61
CDK7-210ENST00000513629 ZKSCAN1P17029 563 aaPredicted RBP11.22□□□□□ -0.61
CDK7-210ENST00000513629 CAPN2P17655 700 aa11.22□□□□□ -0.61
CDK7-210ENST00000513629 VCAM1P19320 739 aa11.22□□□□□ -0.61
CDK7-210ENST00000513629 USP14P54578 494 aa11.22□□□□□ -0.61
CDK7-210ENST00000513629 LINC01559Q495D7 138 aa11.22□□□□□ -0.61
CDK7-210ENST00000513629 GPR142Q7Z601 462 aa11.22□□□□□ -0.61
CDK7-210ENST00000513629 NECAB2Q7Z6G3 386 aa11.22□□□□□ -0.61
CDK7-210ENST00000513629 SIRT2Q8IXJ6 389 aa11.22□□□□□ -0.61
CDK7-210ENST00000513629 SDR42E1Q8WUS8 393 aa11.22□□□□□ -0.61
CDK7-210ENST00000513629 EDC3Q96F86 508 aaKnown RBP11.22□□□□□ -0.61
CDK7-210ENST00000513629 CRNKL1Q9BZJ0 848 aaKnown RBP11.22□□□□□ -0.61
CDK7-210ENST00000513629 ZNF532Q9HCE3 1301 aa11.22□□□□□ -0.61
CDK7-210ENST00000513629 CWC22Q9HCG8 908 aaKnown RBP11.22□□□□□ -0.61
CDK7-210ENST00000513629 MCM9Q9NXL9 1143 aa11.22□□□□□ -0.61
CDK7-210ENST00000513629 POM121CA8CG34 1229 aa11.21□□□□□ -0.61
CDK7-210ENST00000513629 ZBBXA8MT70 800 aa11.21□□□□□ -0.61
CDK7-210ENST00000513629 USP17L15C9J2P7 530 aa11.21□□□□□ -0.61
CDK7-210ENST00000513629 USP17L13C9JLJ4 530 aa11.21□□□□□ -0.61
CDK7-210ENST00000513629 USP17L11C9JVI0 530 aa11.21□□□□□ -0.61
CDK7-210ENST00000513629 USP17L18D6R9N7 530 aa11.21□□□□□ -0.61
CDK7-210ENST00000513629 USP17L22D6RA61 530 aa11.21□□□□□ -0.61
CDK7-210ENST00000513629 USP17L17D6RBQ6 530 aa11.21□□□□□ -0.61
CDK7-210ENST00000513629 USP17L19D6RCP7 530 aa11.21□□□□□ -0.61
CDK7-210ENST00000513629 USP17L20D6RJB6 530 aa11.21□□□□□ -0.61
CDK7-210ENST00000513629 CNMDO75829 334 aa11.21□□□□□ -0.61
CDK7-210ENST00000513629 XRCC5P13010 732 aaKnown RBP11.21□□□□□ -0.61
CDK7-210ENST00000513629 GUCY1A2P33402 732 aa11.21□□□□□ -0.61
CDK7-210ENST00000513629 GABPAQ06546 454 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms