RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, humanhuman

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-206ENST00000513433 ATG14Q6ZNE5 492 aa7.43□□□□□ -1.22
SNX25-206ENST00000513433 ANKS4BQ8N8V4 417 aa7.43□□□□□ -1.22
SNX25-206ENST00000513433 FBXO27Q8NI29 283 aa7.43□□□□□ -1.22
SNX25-206ENST00000513433 SYTL5Q8TDW5 730 aaPredicted RBP7.43□□□□□ -1.22
SNX25-206ENST00000513433 SLC6A17Q9H1V8 727 aa7.43□□□□□ -1.22
SNX25-206ENST00000513433 KCNK12Q9HB15 430 aa7.43□□□□□ -1.22
SNX25-206ENST00000513433 ASXL2Q76L83 1435 aa7.43□□□□□ -1.22
SNX25-206ENST00000513433 TIAM1Q13009 1591 aa7.42□□□□□ -1.22
SNX25-206ENST00000513433 SLC22A31A6NKX4 558 aa7.42□□□□□ -1.22
SNX25-206ENST00000513433 ZSCAN22P10073 491 aaPredicted RBP7.42□□□□□ -1.22
SNX25-206ENST00000513433 LTKP29376 864 aa7.42□□□□□ -1.22
SNX25-206ENST00000513433 DUSP4Q13115 394 aa7.42□□□□□ -1.22
SNX25-206ENST00000513433 SNAP47Q5SQN1 464 aa7.42□□□□□ -1.22
SNX25-206ENST00000513433 C19orf44Q9H6X5 657 aa7.42□□□□□ -1.22
SNX25-206ENST00000513433 EHMT1Q9H9B1 1298 aa7.42□□□□□ -1.22
SNX25-206ENST00000513433 VTI1BQ9UEU0 232 aa7.42□□□□□ -1.22
SNX25-206ENST00000513433 SMG5Q9UPR3 1016 aaKnown RBP7.42□□□□□ -1.22
SNX25-206ENST00000513433 TTBK1Q5TCY1 1321 aaPredicted RBP7.42□□□□□ -1.22
SNX25-206ENST00000513433 MAP3K1Q13233 1512 aa7.42□□□□□ -1.22
SNX25-206ENST00000513433 GLI2P10070 1586 aa7.42□□□□□ -1.22
SNX25-206ENST00000513433 NOTOA8MTQ0 251 aa7.41□□□□□ -1.22
SNX25-206ENST00000513433 NPIPB6E9PJ23 425 aa7.41□□□□□ -1.22
SNX25-206ENST00000513433 GRIN3BO60391 1043 aa7.41□□□□□ -1.22
SNX25-206ENST00000513433 UBOX5O94941 541 aa7.41□□□□□ -1.22
SNX25-206ENST00000513433 PDIA4P13667 645 aaKnown RBP7.41□□□□□ -1.22
SNX25-206ENST00000513433 TNNI2P48788 182 aa7.41□□□□□ -1.22
SNX25-206ENST00000513433 FAM160A1Q05DH4 1040 aa7.41□□□□□ -1.22
SNX25-206ENST00000513433 CDCP2Q5VXM1 449 aa7.41□□□□□ -1.22
SNX25-206ENST00000513433 FBXL19Q6PCT2 694 aa7.41□□□□□ -1.22
SNX25-206ENST00000513433 RNF111Q6ZNA4 994 aa7.41□□□□□ -1.22
SNX25-206ENST00000513433 DAGLBQ8NCG7 672 aa7.41□□□□□ -1.22
SNX25-206ENST00000513433 INTS4Q96HW7 963 aaKnown RBP7.41□□□□□ -1.22
SNX25-206ENST00000513433 KIF2CQ99661 725 aa7.41□□□□□ -1.22
SNX25-206ENST00000513433 HDAC8Q9BY41 377 aa7.41□□□□□ -1.22
SNX25-206ENST00000513433 ZNF552Q9H707 407 aaPredicted RBP7.41□□□□□ -1.22
SNX25-206ENST00000513433 MRS2Q9HD23 443 aa7.41□□□□□ -1.22
SNX25-206ENST00000513433 KBTBD4Q9NVX7 518 aa7.41□□□□□ -1.22
SNX25-206ENST00000513433 KLHL3Q9UH77 587 aa7.41□□□□□ -1.22
SNX25-206ENST00000513433 KIF14Q15058 1648 aa7.41□□□□□ -1.22
SNX25-206ENST00000513433 MAP3K4Q9Y6R4 1608 aa7.41□□□□□ -1.22
SNX25-206ENST00000513433 SEMA7AO75326 666 aa7.4□□□□□ -1.22
SNX25-206ENST00000513433 RNF4P78317 190 aa7.4□□□□□ -1.22
SNX25-206ENST00000513433 TTLL10Q6ZVT0 673 aa7.4□□□□□ -1.22
SNX25-206ENST00000513433 USHBP1Q8N6Y0 703 aa7.4□□□□□ -1.22
SNX25-206ENST00000513433 KCNN1Q92952 543 aa7.4□□□□□ -1.22
SNX25-206ENST00000513433 MCOLN1Q9GZU1 580 aa7.4□□□□□ -1.22
SNX25-206ENST00000513433 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.4□□□□□ -1.22
SNX25-206ENST00000513433 GMIPQ9P107 970 aa7.4□□□□□ -1.22
SNX25-206ENST00000513433 EHBP1L1Q8N3D4 1523 aa7.4□□□□□ -1.22
SNX25-206ENST00000513433 ABCA9Q8IUA7 1624 aa7.4□□□□□ -1.22
SNX25-206ENST00000513433 MAGI3Q5TCQ9 1506 aa7.39□□□□□ -1.23
SNX25-206ENST00000513433 MYOCOSA0A1B0GUC4 107 aa7.39□□□□□ -1.23
SNX25-206ENST00000513433 TCAF2A6NFQ2 919 aa7.39□□□□□ -1.23
SNX25-206ENST00000513433 MINDY4BA8MYZ0 360 aa7.39□□□□□ -1.23
SNX25-206ENST00000513433 CCNFP41002 786 aa7.39□□□□□ -1.23
SNX25-206ENST00000513433 NMIQ13287 307 aaPredicted RBP7.39□□□□□ -1.23
SNX25-206ENST00000513433 MLECQ14165 292 aa7.39□□□□□ -1.23
SNX25-206ENST00000513433 CWF19L2Q2TBE0 894 aaKnown RBP7.39□□□□□ -1.23
SNX25-206ENST00000513433 PHACTR4Q8IZ21 702 aa7.39□□□□□ -1.23
SNX25-206ENST00000513433 CNNM2Q9H8M5 875 aa7.39□□□□□ -1.23
SNX25-206ENST00000513433 TTC37Q6PGP7 1564 aa7.38□□□□□ -1.23
SNX25-206ENST00000513433 TROQ12816 1431 aaPredicted RBP7.38□□□□□ -1.23
SNX25-206ENST00000513433 TEX51A0A1B0GUA7 166 aa7.38□□□□□ -1.23
SNX25-206ENST00000513433 HRKO00198 91 aa7.38□□□□□ -1.23
SNX25-206ENST00000513433 EIF4A3P38919 411 aaKnown RBP7.38□□□□□ -1.23
SNX25-206ENST00000513433 LINC00310P59036 64 aa7.38□□□□□ -1.23
SNX25-206ENST00000513433 RAD51AP2Q09MP3 1159 aa7.38□□□□□ -1.23
SNX25-206ENST00000513433 MRPL58Q14197 206 aaKnown RBP7.38□□□□□ -1.23
SNX25-206ENST00000513433 NBPF9Q3BBW0 867 aa7.38□□□□□ -1.23
SNX25-206ENST00000513433 NBPF12Q5TAG4 269 aaPredicted RBP7.38□□□□□ -1.23
SNX25-206ENST00000513433 NLRX1Q86UT6 975 aa7.38□□□□□ -1.23
SNX25-206ENST00000513433 REXO1Q8N1G1 1221 aaKnown RBP7.38□□□□□ -1.23
SNX25-206ENST00000513433 ZNF655Q8N720 491 aaPredicted RBP7.38□□□□□ -1.23
SNX25-206ENST00000513433 LINC00116Q8NCU8 138 aa7.38□□□□□ -1.23
SNX25-206ENST00000513433 SYTL4Q96C24 671 aaPredicted RBP7.38□□□□□ -1.23
SNX25-206ENST00000513433 COPRSQ9NQ92 184 aa7.38□□□□□ -1.23
SNX25-206ENST00000513433 SUPT16HQ9Y5B9 1047 aaKnown RBP7.38□□□□□ -1.23
SNX25-206ENST00000513433 PPRC1Q5VV67 1664 aaKnown RBP7.38□□□□□ -1.23
SNX25-206ENST00000513433 GBP1P32455 592 aa7.37□□□□□ -1.23
SNX25-206ENST00000513433 KIR2DL1P43626 348 aaPredicted RBP7.37□□□□□ -1.23
SNX25-206ENST00000513433 KIR2DL2P43627 348 aaPredicted RBP7.37□□□□□ -1.23
SNX25-206ENST00000513433 BRMS1Q9HCU9 246 aa7.37□□□□□ -1.23
SNX25-206ENST00000513433 GCM1Q9NP62 436 aa7.37□□□□□ -1.23
SNX25-206ENST00000513433 PCDHB14Q9Y5E9 798 aa7.37□□□□□ -1.23
SNX25-206ENST00000513433 MYO5CQ9NQX4 1742 aa7.37□□□□□ -1.23
SNX25-206ENST00000513433 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.37□□□□□ -1.23
SNX25-206ENST00000513433 SUPT6HQ7KZ85 1726 aaKnown RBP7.36□□□□□ -1.23
SNX25-206ENST00000513433 PSPNO60542 156 aa7.36□□□□□ -1.23
SNX25-206ENST00000513433 DLG4P78352 724 aa7.36□□□□□ -1.23
SNX25-206ENST00000513433 CLEC16AQ2KHT3 1053 aa7.36□□□□□ -1.23
SNX25-206ENST00000513433 CCDC27Q2M243 656 aa7.36□□□□□ -1.23
SNX25-206ENST00000513433 ARSHQ5FYA8 562 aa7.36□□□□□ -1.23
SNX25-206ENST00000513433 CIAPIN1Q6FI81 312 aa7.36□□□□□ -1.23
SNX25-206ENST00000513433 TCTN2Q96GX1 697 aa7.36□□□□□ -1.23
SNX25-206ENST00000513433 CRTAC1Q9NQ79 661 aa7.36□□□□□ -1.23
SNX25-206ENST00000513433 ARAP3Q8WWN8 1544 aa7.36□□□□□ -1.23
SNX25-206ENST00000513433 LRRC9Q6ZRR7 1453 aa7.36□□□□□ -1.23
SNX25-206ENST00000513433 ITSN2Q9NZM3 1697 aa7.35□□□□□ -1.23
SNX25-206ENST00000513433 PREX2Q70Z35 1606 aa7.35□□□□□ -1.23
SNX25-206ENST00000513433 CFAP74Q9C0B2 1584 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms