RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 ELP3Q9H9T3 547 aa6.26□□□□□ -1.41
HTT-211ENST00000513326 NDFIP2Q9NV92 336 aa6.26□□□□□ -1.41
HTT-211ENST00000513326 CUEDC1Q9NWM3 386 aaPredicted RBP6.26□□□□□ -1.41
HTT-211ENST00000513326 CHPF2Q9P2E5 772 aa6.26□□□□□ -1.41
HTT-211ENST00000513326 TSPYL4Q9UJ04 414 aa6.26□□□□□ -1.41
HTT-211ENST00000513326 ALPK3Q96L96 1907 aa6.25□□□□□ -1.41
HTT-211ENST00000513326 CLRN2A0PK11 232 aa6.25□□□□□ -1.41
HTT-211ENST00000513326 DCDC2BA2VCK2 349 aa6.25□□□□□ -1.41
HTT-211ENST00000513326 A6NHS1 94 aa6.25□□□□□ -1.41
HTT-211ENST00000513326 LCE2BO14633 110 aa6.25□□□□□ -1.41
HTT-211ENST00000513326 BNIP3LO60238 219 aa6.25□□□□□ -1.41
HTT-211ENST00000513326 TNFRSF21O75509 655 aa6.25□□□□□ -1.41
HTT-211ENST00000513326 USP2O75604 605 aaPredicted RBP6.25□□□□□ -1.41
HTT-211ENST00000513326 ZBTB48P10074 688 aaPredicted RBP6.25□□□□□ -1.41
HTT-211ENST00000513326 MAPTP10636 758 aaKnown RBP6.25□□□□□ -1.41
HTT-211ENST00000513326 ATP2B2Q01814 1243 aa6.25□□□□□ -1.41
HTT-211ENST00000513326 SFSWAPQ12872 951 aaKnown RBP6.25□□□□□ -1.41
HTT-211ENST00000513326 ENOX2Q16206 610 aaKnown RBP6.25□□□□□ -1.41
HTT-211ENST00000513326 MAP3K11Q16584 847 aa6.25□□□□□ -1.41
HTT-211ENST00000513326 FOXR1Q6PIV2 292 aa6.25□□□□□ -1.41
HTT-211ENST00000513326 CERS5Q8N5B7 392 aa6.25□□□□□ -1.41
HTT-211ENST00000513326 PNISRQ8TF01 805 aaKnown RBP6.25□□□□□ -1.41
HTT-211ENST00000513326 DEFB129Q9H1M3 183 aa6.25□□□□□ -1.41
HTT-211ENST00000513326 DNAJC25Q9H1X3 360 aa6.25□□□□□ -1.41
HTT-211ENST00000513326 STAP2Q9UGK3 403 aa6.25□□□□□ -1.41
HTT-211ENST00000513326 ATXN7L1Q9ULK2 861 aaPredicted RBP6.25□□□□□ -1.41
HTT-211ENST00000513326 PHF24Q9UPV7 400 aa6.25□□□□□ -1.41
HTT-211ENST00000513326 XDHP47989 1333 aa6.25□□□□□ -1.41
HTT-211ENST00000513326 VCANP13611 3396 aa6.24□□□□□ -1.41
HTT-211ENST00000513326 UNCXA6NJT0 531 aa6.24□□□□□ -1.41
HTT-211ENST00000513326 PPFIA3O75145 1194 aa6.24□□□□□ -1.41
HTT-211ENST00000513326 PRPF40AO75400 957 aaKnown RBP6.24□□□□□ -1.41
HTT-211ENST00000513326 LDHBP07195 334 aaKnown RBP6.24□□□□□ -1.41
HTT-211ENST00000513326 CCINQ13939 588 aa6.24□□□□□ -1.41
HTT-211ENST00000513326 NFE2L2Q16236 605 aa6.24□□□□□ -1.41
HTT-211ENST00000513326 ALG1LQ6GMV1 187 aa6.24□□□□□ -1.41
HTT-211ENST00000513326 APOBEC3FQ8IUX4 373 aaKnown RBP6.24□□□□□ -1.41
HTT-211ENST00000513326 PLBD2Q8NHP8 589 aa6.24□□□□□ -1.41
HTT-211ENST00000513326 SNX29Q8TEQ0 813 aa6.24□□□□□ -1.41
HTT-211ENST00000513326 GTPBP3Q969Y2 492 aaKnown RBP6.24□□□□□ -1.41
HTT-211ENST00000513326 OPTNQ96CV9 577 aa6.24□□□□□ -1.41
HTT-211ENST00000513326 ABHD17AQ96GS6 310 aa6.24□□□□□ -1.41
HTT-211ENST00000513326 CFAP53Q96M91 514 aa6.24□□□□□ -1.41
HTT-211ENST00000513326 TRERF1Q96PN7 1200 aa6.24□□□□□ -1.41
HTT-211ENST00000513326 MARK1Q9P0L2 795 aa6.24□□□□□ -1.41
HTT-211ENST00000513326 RAPGEFL1Q9UHV5 662 aa6.24□□□□□ -1.41
HTT-211ENST00000513326 NUDCQ9Y266 331 aa6.24□□□□□ -1.41
HTT-211ENST00000513326 MED23Q9ULK4 1368 aa6.23□□□□□ -1.41
HTT-211ENST00000513326 PNMA6FA0A0J9YX94 578 aa6.23□□□□□ -1.41
HTT-211ENST00000513326 SNAP23O00161 211 aa6.23□□□□□ -1.41
HTT-211ENST00000513326 EIF1AYO14602 144 aaKnown RBP6.23□□□□□ -1.41
HTT-211ENST00000513326 CPNE3O75131 537 aaKnown RBP6.23□□□□□ -1.41
HTT-211ENST00000513326 INHBEP58166 350 aa6.23□□□□□ -1.41
HTT-211ENST00000513326 TAGLNQ01995 201 aaKnown RBP6.23□□□□□ -1.41
HTT-211ENST00000513326 ORC1Q13415 861 aa6.23□□□□□ -1.41
HTT-211ENST00000513326 TAF1CQ15572 869 aaPredicted RBP6.23□□□□□ -1.41
HTT-211ENST00000513326 PODNQ7Z5L7 613 aa6.23□□□□□ -1.41
HTT-211ENST00000513326 DEFB123Q8N688 67 aa6.23□□□□□ -1.41
HTT-211ENST00000513326 FBF1Q8TES7 1133 aa6.23□□□□□ -1.41
HTT-211ENST00000513326 GSX2Q9BZM3 304 aa6.23□□□□□ -1.41
HTT-211ENST00000513326 ABI2Q9NYB9 513 aaPredicted RBP6.23□□□□□ -1.41
HTT-211ENST00000513326 TMEM63CQ9P1W3 806 aa6.23□□□□□ -1.41
HTT-211ENST00000513326 JAG2Q9Y219 1238 aa6.23□□□□□ -1.41
HTT-211ENST00000513326 SPTBN5Q9NRC6 3674 aaKnown RBP6.22□□□□□ -1.41
HTT-211ENST00000513326 COL1A1P02452 1464 aaPredicted RBP6.22□□□□□ -1.41
HTT-211ENST00000513326 CCL15-CCL14A0A0B4J2E2 113 aa6.22□□□□□ -1.41
HTT-211ENST00000513326 F8W031 263 aaPredicted RBP6.22□□□□□ -1.41
HTT-211ENST00000513326 PHACTR2O75167 634 aa6.22□□□□□ -1.41
HTT-211ENST00000513326 CCL5P13501 91 aa6.22□□□□□ -1.41
HTT-211ENST00000513326 LACTBP83111 547 aaPredicted RBP6.22□□□□□ -1.41
HTT-211ENST00000513326 CCL15Q16663 113 aa6.22□□□□□ -1.41
HTT-211ENST00000513326 STRIP1Q5VSL9 837 aa6.22□□□□□ -1.41
HTT-211ENST00000513326 TTC39BQ5VTQ0 682 aaPredicted RBP6.22□□□□□ -1.41
HTT-211ENST00000513326 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.22□□□□□ -1.41
HTT-211ENST00000513326 SV2AQ7L0J3 742 aa6.22□□□□□ -1.41
HTT-211ENST00000513326 NBPF11Q86T75 865 aa6.22□□□□□ -1.41
HTT-211ENST00000513326 NANOS1Q8WY41 292 aaKnown RBP6.22□□□□□ -1.41
HTT-211ENST00000513326 PMEPA1Q969W9 287 aa6.22□□□□□ -1.41
HTT-211ENST00000513326 MRRFQ96E11 262 aaKnown RBP6.22□□□□□ -1.41
HTT-211ENST00000513326 PRMT6Q96LA8 375 aaPredicted RBP6.22□□□□□ -1.41
HTT-211ENST00000513326 PNMA5Q96PV4 448 aa6.22□□□□□ -1.41
HTT-211ENST00000513326 VEZTQ9HBM0 779 aa6.22□□□□□ -1.41
HTT-211ENST00000513326 ZFYVE28Q9HCC9 887 aa6.22□□□□□ -1.41
HTT-211ENST00000513326 MTMR10Q9NXD2 777 aa6.22□□□□□ -1.41
HTT-211ENST00000513326 FOXD3Q9UJU5 478 aaPredicted RBP6.22□□□□□ -1.41
HTT-211ENST00000513326 MINPP1Q9UNW1 487 aa6.22□□□□□ -1.41
HTT-211ENST00000513326 ECM29Q5VYK3 1845 aa6.22□□□□□ -1.41
HTT-211ENST00000513326 ZNF804BA4D1E1 1349 aa6.22□□□□□ -1.41
HTT-211ENST00000513326 TTC28Q96AY4 2481 aa6.21□□□□□ -1.41
HTT-211ENST00000513326 CDC14CA4D256 554 aa6.21□□□□□ -1.42
HTT-211ENST00000513326 SASH3O75995 380 aa6.21□□□□□ -1.42
HTT-211ENST00000513326 FARP2O94887 1054 aaPredicted RBP6.21□□□□□ -1.42
HTT-211ENST00000513326 CD33P20138 364 aa6.21□□□□□ -1.42
HTT-211ENST00000513326 FGFR3P22607 806 aa6.21□□□□□ -1.42
HTT-211ENST00000513326 TARSP26639 723 aaKnown RBP6.21□□□□□ -1.42
HTT-211ENST00000513326 GJA8P48165 433 aa6.21□□□□□ -1.42
HTT-211ENST00000513326 CCT4P50991 539 aaKnown RBP6.21□□□□□ -1.42
HTT-211ENST00000513326 SPEM2Q0P670 501 aa6.21□□□□□ -1.42
HTT-211ENST00000513326 VGLL4Q14135 290 aa6.21□□□□□ -1.42
HTT-211ENST00000513326 RASA3Q14644 834 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms