RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 OTUD7BQ6GQQ9 843 aa8.87□□□□□ -0.99
HMGXB3-204ENST00000513318 NFXL1Q6ZNB6 911 aa8.87□□□□□ -0.99
HMGXB3-204ENST00000513318 Q6ZUG5 572 aa8.87□□□□□ -0.99
HMGXB3-204ENST00000513318 CATIPQ7Z7H3 387 aa8.87□□□□□ -0.99
HMGXB3-204ENST00000513318 ANKRD23Q86SG2 305 aa8.87□□□□□ -0.99
HMGXB3-204ENST00000513318 ZNF654Q8IZM8 581 aa8.87□□□□□ -0.99
HMGXB3-204ENST00000513318 SPICE1Q8N0Z3 855 aa8.87□□□□□ -0.99
HMGXB3-204ENST00000513318 DCAF4Q8WV16 495 aa8.87□□□□□ -0.99
HMGXB3-204ENST00000513318 BRI3BPQ8WY22 251 aa8.87□□□□□ -0.99
HMGXB3-204ENST00000513318 GMCL1Q96IK5 515 aa8.87□□□□□ -0.99
HMGXB3-204ENST00000513318 KIF2CQ99661 725 aa8.87□□□□□ -0.99
HMGXB3-204ENST00000513318 PNMA3Q9UL41 463 aa8.87□□□□□ -0.99
HMGXB3-204ENST00000513318 SLC45A1Q9Y2W3 748 aa8.87□□□□□ -0.99
HMGXB3-204ENST00000513318 ZSWIM8A7E2V4 1837 aa8.87□□□□□ -0.99
HMGXB3-204ENST00000513318 USP17L15C9J2P7 530 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 BTBD19C9JJ37 291 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 USP17L13C9JLJ4 530 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 USP17L11C9JVI0 530 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 USP17L18D6R9N7 530 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 USP17L22D6RA61 530 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 USP17L17D6RBQ6 530 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 USP17L19D6RCP7 530 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 USP17L20D6RJB6 530 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 IGF2BP3O00425 579 aaKnown RBP eCLIP8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 ALDH1A1P00352 501 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 CALM1P0DP23 149 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 CALM2P0DP24 149 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 CALM3P0DP25 149 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 SNHG28P0DPA3 235 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 BMP3P12645 472 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 HOXA7P31268 230 aaPredicted RBP8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 NEK4P51957 841 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 RCAN1P53805 252 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 IRX3P78415 501 aaPredicted RBP8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 USP17L24Q0WX57 530 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 TOB2Q14106 344 aaPredicted RBP8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 ANKRD1Q15327 319 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 CCDC96Q2M329 555 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 ASPRV1Q53RT3 343 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 KIAA1755Q5JYT7 1200 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 TREML2Q5T2D2 321 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 GPATCH4Q5T3I0 446 aaKnown RBP8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 SLFN13Q68D06 897 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 GPAT2Q6NUI2 795 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 APOA5Q6Q788 366 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 OXER1Q8TDS5 423 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 PTCD2Q8WV60 388 aaKnown RBP8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 BRF1Q92994 677 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 ZIC5Q96T25 663 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 MAP3K14Q99558 947 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 ALDH8A1Q9H2A2 487 aaPredicted RBP8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 RPAP3Q9H6T3 665 aaPredicted RBP8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 SENP2Q9HC62 589 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 PDRG1Q9NUG6 133 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 SLC12A7Q9Y666 1083 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 MCM3APO60318 1980 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 NID2Q14112 1375 aa8.86□□□□□ -0.99
HMGXB3-204ENST00000513318 MYPNQ86TC9 1320 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 ZNF236Q9UL36 1845 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 KLF18A0A0U1RQI7 1052 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 PDHXO00330 501 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 ST18O60284 1047 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 PARP1P09874 1014 aaKnown RBP8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 KIF5BP33176 963 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 STAT2P52630 851 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 EVCP57679 992 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 MAP2K1Q02750 393 aaPredicted RBP8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 ZNF543Q08ER8 600 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 TROAPQ12815 778 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 GRM4Q14833 912 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 FAM83BQ5T0W9 1011 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 SYNE3Q6ZMZ3 975 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 CATSPERGQ6ZRH7 1159 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 RASGRP2Q7LDG7 609 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 MICU3Q86XE3 530 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 FAM43AQ8N2R8 423 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 DNAJC5GQ8N7S2 189 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 CTCFLQ8NI51 663 aaPredicted RBP8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 KCNV2Q8TDN2 545 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 PARK7Q99497 189 aaKnown RBP8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 PTPN18Q99952 460 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 TANGO6Q9C0B7 1094 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 ISY1Q9ULR0 285 aaKnown RBP8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 MTMR7Q9Y216 660 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 CEP350Q5VT06 3117 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 LCTP09848 1927 aa8.85□□□□□ -0.99
HMGXB3-204ENST00000513318 PCNTO95613 3336 aa8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 GOLGA8BA8MQT2 603 aa8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 ZBTB43O43298 467 aa8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 PLA2G6O60733 806 aa8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 FLOT1O75955 427 aa8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 OSBPP22059 807 aa8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 AK2P54819 239 aa8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 APOBRQ0VD83 1088 aa8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 PPP2R5BQ15173 497 aa8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 TAF1CQ15572 869 aaPredicted RBP8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 LCE2DQ5TA82 110 aaPredicted RBP8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 LBX2Q6XYB7 198 aa8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 KCTD1Q719H9 257 aa8.84□□□□□ -0.99
HMGXB3-204ENST00000513318 FAM160B2Q86V87 743 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms