RNA–Protein interactions for RNA: ENST00000513043.5

DDR1-270, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 604 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-270ENST00000513043 WDR78Q5VTH9 848 aa20.36■□□□□ 0.85
DDR1-270ENST00000513043 ABHD8Q96I13 439 aa20.36■□□□□ 0.85
DDR1-270ENST00000513043 MYL10Q9BUA6 226 aa20.36■□□□□ 0.85
DDR1-270ENST00000513043 CPVLQ9H3G5 476 aa20.36■□□□□ 0.85
DDR1-270ENST00000513043 ADAMTS5Q9UNA0 930 aa20.36■□□□□ 0.85
DDR1-270ENST00000513043 CCDC69A6NI79 296 aa20.35■□□□□ 0.85
DDR1-270ENST00000513043 EIF5BO60841 1220 aaKnown RBP20.35■□□□□ 0.85
DDR1-270ENST00000513043 ZBED4O75132 1171 aa20.35■□□□□ 0.85
DDR1-270ENST00000513043 HMGB1P09429 215 aaKnown RBP20.35■□□□□ 0.85
DDR1-270ENST00000513043 SLC4A3P48751 1232 aa20.35■□□□□ 0.85
DDR1-270ENST00000513043 BLOC1S2Q6QNY1 142 aa20.35■□□□□ 0.85
DDR1-270ENST00000513043 CATIPQ7Z7H3 387 aa20.35■□□□□ 0.85
DDR1-270ENST00000513043 CPXCR1Q8N123 301 aa20.35■□□□□ 0.85
DDR1-270ENST00000513043 REPS2Q8NFH8 660 aa20.35■□□□□ 0.85
DDR1-270ENST00000513043 NUP133Q8WUM0 1156 aa20.35■□□□□ 0.85
DDR1-270ENST00000513043 MOV10L1Q9BXT6 1211 aaKnown RBP20.35■□□□□ 0.85
DDR1-270ENST00000513043 SPATC1LQ9H0A9 340 aa20.35■□□□□ 0.85
DDR1-270ENST00000513043 CWC22Q9HCG8 908 aaKnown RBP20.35■□□□□ 0.85
DDR1-270ENST00000513043 PRR12Q9ULL5 1215 aa20.35■□□□□ 0.85
DDR1-270ENST00000513043 A0A0G2JMZ2 1700 aa20.35■□□□□ 0.85
DDR1-270ENST00000513043 PARP1P09874 1014 aaKnown RBP20.34■□□□□ 0.85
DDR1-270ENST00000513043 PSMA5P28066 241 aa20.34■□□□□ 0.85
DDR1-270ENST00000513043 CCNA1P78396 465 aa20.34■□□□□ 0.85
DDR1-270ENST00000513043 FGD1P98174 961 aa20.34■□□□□ 0.85
DDR1-270ENST00000513043 ARHGEF6Q15052 776 aa20.34■□□□□ 0.85
DDR1-270ENST00000513043 GPATCH4Q5T3I0 446 aaKnown RBP20.34■□□□□ 0.85
DDR1-270ENST00000513043 SYDE2Q5VT97 1194 aa20.34■□□□□ 0.85
DDR1-270ENST00000513043 RAB11FIP4Q86YS3 637 aa20.34■□□□□ 0.85
DDR1-270ENST00000513043 ZNF654Q8IZM8 581 aa20.34■□□□□ 0.85
DDR1-270ENST00000513043 MTA3Q9BTC8 594 aa20.34■□□□□ 0.85
DDR1-270ENST00000513043 UBA5Q9GZZ9 404 aa20.34■□□□□ 0.85
DDR1-270ENST00000513043 RAVER2Q9HCJ3 691 aaKnown RBP20.34■□□□□ 0.85
DDR1-270ENST00000513043 COL11A1P12107 1806 aaPredicted RBP20.33■□□□□ 0.85
DDR1-270ENST00000513043 RPS6KB1P23443 525 aa20.33■□□□□ 0.85
DDR1-270ENST00000513043 ASPRV1Q53RT3 343 aa20.33■□□□□ 0.85
DDR1-270ENST00000513043 CCDC174Q6PII3 467 aa20.33■□□□□ 0.85
DDR1-270ENST00000513043 STAG2Q8N3U4 1231 aa20.33■□□□□ 0.85
DDR1-270ENST00000513043 UPF3BQ9BZI7 483 aaKnown RBP20.33■□□□□ 0.85
DDR1-270ENST00000513043 MCOLN1Q9GZU1 580 aa20.33■□□□□ 0.85
DDR1-270ENST00000513043 SLC38A10Q9HBR0 1119 aa20.33■□□□□ 0.85
DDR1-270ENST00000513043 GABRQQ9UN88 632 aa20.33■□□□□ 0.85
DDR1-270ENST00000513043 WDR19Q8NEZ3 1342 aa20.32■□□□□ 0.84
DDR1-270ENST00000513043 PLA2G6O60733 806 aa20.32■□□□□ 0.84
DDR1-270ENST00000513043 ERCC3P19447 782 aa20.32■□□□□ 0.84
DDR1-270ENST00000513043 RXRAP19793 462 aa20.32■□□□□ 0.84
DDR1-270ENST00000513043 MAPK4P31152 587 aa20.32■□□□□ 0.84
DDR1-270ENST00000513043 STAT3P40763 770 aa20.32■□□□□ 0.84
DDR1-270ENST00000513043 LIFRP42702 1097 aa20.32■□□□□ 0.84
DDR1-270ENST00000513043 PRKCZQ05513 592 aa20.32■□□□□ 0.84
DDR1-270ENST00000513043 TROAPQ12815 778 aa20.32■□□□□ 0.84
DDR1-270ENST00000513043 SNRNP48Q6IEG0 339 aaKnown RBP20.32■□□□□ 0.84
DDR1-270ENST00000513043 BTNL9Q6UXG8 535 aa20.32■□□□□ 0.84
DDR1-270ENST00000513043 NCAPG2Q86XI2 1143 aa20.32■□□□□ 0.84
DDR1-270ENST00000513043 TMTC2Q8N394 836 aa20.32■□□□□ 0.84
DDR1-270ENST00000513043 COA7Q96BR5 231 aa20.32■□□□□ 0.84
DDR1-270ENST00000513043 ZNF214Q9UL59 606 aaPredicted RBP20.32■□□□□ 0.84
DDR1-270ENST00000513043 MGAMO43451 1857 aa20.31■□□□□ 0.84
DDR1-270ENST00000513043 DHX16O60231 1041 aaKnown RBP20.31■□□□□ 0.84
DDR1-270ENST00000513043 TAL1P17542 331 aaPredicted RBP20.31■□□□□ 0.84
DDR1-270ENST00000513043 GRM4Q14833 912 aa20.31■□□□□ 0.84
DDR1-270ENST00000513043 Q6ZUG5 572 aa20.31■□□□□ 0.84
DDR1-270ENST00000513043 GPR142Q7Z601 462 aa20.31■□□□□ 0.84
DDR1-270ENST00000513043 CCDC144CPQ8IYA2 1237 aa20.31■□□□□ 0.84
DDR1-270ENST00000513043 SRRDQ9UH36 339 aa20.31■□□□□ 0.84
DDR1-270ENST00000513043 MAD2L2Q9UI95 211 aa20.31■□□□□ 0.84
DDR1-270ENST00000513043 NAP1L2Q9ULW6 460 aaPredicted RBP20.31■□□□□ 0.84
DDR1-270ENST00000513043 SLC12A7Q9Y666 1083 aa20.31■□□□□ 0.84
DDR1-270ENST00000513043 DDAH1O94760 285 aa20.3■□□□□ 0.84
DDR1-270ENST00000513043 HOXD10P28358 340 aa20.3■□□□□ 0.84
DDR1-270ENST00000513043 RUFY3Q7L099 469 aa20.3■□□□□ 0.84
DDR1-270ENST00000513043 PLEKHH3Q7Z736 793 aa20.3■□□□□ 0.84
DDR1-270ENST00000513043 RIOX2Q8IUF8 465 aa20.3■□□□□ 0.84
DDR1-270ENST00000513043 AGBL1Q96MI9 1066 aa20.3■□□□□ 0.84
DDR1-270ENST00000513043 TEX13BQ9BXU2 312 aa20.3■□□□□ 0.84
DDR1-270ENST00000513043 ZSWIM6Q9HCJ5 1215 aa20.3■□□□□ 0.84
DDR1-270ENST00000513043 VAT1LQ9HCJ6 419 aa20.3■□□□□ 0.84
DDR1-270ENST00000513043 BRPF3Q9ULD4 1205 aa20.3■□□□□ 0.84
DDR1-270ENST00000513043 PTPN22Q9Y2R2 807 aa20.3■□□□□ 0.84
DDR1-270ENST00000513043 RIPK3Q9Y572 518 aa20.3■□□□□ 0.84
DDR1-270ENST00000513043 CYP46A1Q9Y6A2 500 aa20.3■□□□□ 0.84
DDR1-270ENST00000513043 PTCH2Q9Y6C5 1203 aa20.3■□□□□ 0.84
DDR1-270ENST00000513043 PALM3A6NDB9 673 aaPredicted RBP20.29■□□□□ 0.84
DDR1-270ENST00000513043 KLRF2D3W0D1 207 aa20.29■□□□□ 0.84
DDR1-270ENST00000513043 GNRH1P01148 92 aa20.29■□□□□ 0.84
DDR1-270ENST00000513043 FLT3LGP49771 235 aa20.29■□□□□ 0.84
DDR1-270ENST00000513043 MICU3Q86XE3 530 aa20.29■□□□□ 0.84
DDR1-270ENST00000513043 ADGRF4Q8IZF3 695 aa20.29■□□□□ 0.84
DDR1-270ENST00000513043 BRF1Q92994 677 aa20.29■□□□□ 0.84
DDR1-270ENST00000513043 RANBP17Q9H2T7 1088 aaKnown RBP20.29■□□□□ 0.84
DDR1-270ENST00000513043 HOMER2Q9NSB8 354 aa20.29■□□□□ 0.84
DDR1-270ENST00000513043 IVNS1ABPQ9Y6Y0 642 aa20.29■□□□□ 0.84
DDR1-270ENST00000513043 ZNF536O15090 1300 aa20.28■□□□□ 0.84
DDR1-270ENST00000513043 KLF18A0A0U1RQI7 1052 aa20.28■□□□□ 0.84
DDR1-270ENST00000513043 SLC25A27O95847 323 aa20.28■□□□□ 0.84
DDR1-270ENST00000513043 FDX1P10109 184 aa20.28■□□□□ 0.84
DDR1-270ENST00000513043 ANAPC15P60006 121 aa20.28■□□□□ 0.84
DDR1-270ENST00000513043 APOBRQ0VD83 1088 aa20.28■□□□□ 0.84
DDR1-270ENST00000513043 PKN2Q16513 984 aaKnown RBP20.28■□□□□ 0.84
DDR1-270ENST00000513043 FBXO46Q6PJ61 603 aaPredicted RBP20.28■□□□□ 0.84
DDR1-270ENST00000513043 APOA5Q6Q788 366 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms