RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.54□□□□□ -0.56
TRIO-220ENST00000512979 GTF3C2Q8WUA4 911 aaPredicted RBP11.54□□□□□ -0.56
TRIO-220ENST00000512979 ZNF333Q96JL9 665 aa11.54□□□□□ -0.56
TRIO-220ENST00000512979 PARK7Q99497 189 aaKnown RBP11.54□□□□□ -0.56
TRIO-220ENST00000512979 DOCK2Q92608 1830 aa11.53□□□□□ -0.56
TRIO-220ENST00000512979 A0A0G2JLL6 359 aaPredicted RBP11.53□□□□□ -0.56
TRIO-220ENST00000512979 CTNND1O60716 968 aaKnown RBP11.53□□□□□ -0.56
TRIO-220ENST00000512979 GNRH1P01148 92 aa11.53□□□□□ -0.56
TRIO-220ENST00000512979 CYP2C8P10632 490 aa11.53□□□□□ -0.56
TRIO-220ENST00000512979 EN2P19622 333 aaPredicted RBP11.53□□□□□ -0.56
TRIO-220ENST00000512979 PSMC4P43686 418 aa11.53□□□□□ -0.56
TRIO-220ENST00000512979 GADL1Q6ZQY3 521 aa11.53□□□□□ -0.56
TRIO-220ENST00000512979 FASTKD5Q7L8L6 764 aaKnown RBP11.53□□□□□ -0.56
TRIO-220ENST00000512979 PRRT2Q7Z6L0 340 aaPredicted RBP11.53□□□□□ -0.56
TRIO-220ENST00000512979 TEX11Q8IYF3 940 aa11.53□□□□□ -0.56
TRIO-220ENST00000512979 MRRFQ96E11 262 aaKnown RBP11.53□□□□□ -0.56
TRIO-220ENST00000512979 NOL10Q9BSC4 688 aaKnown RBP11.53□□□□□ -0.56
TRIO-220ENST00000512979 OSBPL5Q9H0X9 879 aaPredicted RBP11.53□□□□□ -0.56
TRIO-220ENST00000512979 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.53□□□□□ -0.56
TRIO-220ENST00000512979 KIAA1522Q9P206 1035 aaPredicted RBP11.53□□□□□ -0.56
TRIO-220ENST00000512979 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.53□□□□□ -0.56
TRIO-220ENST00000512979 AFG3L2Q9Y4W6 797 aa11.53□□□□□ -0.56
TRIO-220ENST00000512979 ZBED9Q6R2W3 1325 aa11.53□□□□□ -0.56
TRIO-220ENST00000512979 ADGRA2Q96PE1 1338 aa11.53□□□□□ -0.56
TRIO-220ENST00000512979 TRIM75PA6NK02 468 aa11.52□□□□□ -0.57
TRIO-220ENST00000512979 M0R2N6 131 aa11.52□□□□□ -0.57
TRIO-220ENST00000512979 CTGFP29279 349 aa11.52□□□□□ -0.57
TRIO-220ENST00000512979 SCTRP47872 440 aa11.52□□□□□ -0.57
TRIO-220ENST00000512979 PRMT2P55345 433 aa11.52□□□□□ -0.57
TRIO-220ENST00000512979 SLC4A8Q2Y0W8 1093 aa11.52□□□□□ -0.57
TRIO-220ENST00000512979 NAA16Q6N069 864 aaPredicted RBP11.52□□□□□ -0.57
TRIO-220ENST00000512979 CAPN12Q6ZSI9 719 aa11.52□□□□□ -0.57
TRIO-220ENST00000512979 CCDC84Q86UT8 332 aaPredicted RBP11.52□□□□□ -0.57
TRIO-220ENST00000512979 SH3RF3Q8TEJ3 882 aaPredicted RBP11.52□□□□□ -0.57
TRIO-220ENST00000512979 SH3TC2Q8TF17 1288 aa11.52□□□□□ -0.57
TRIO-220ENST00000512979 GIPC2Q8TF65 315 aa11.52□□□□□ -0.57
TRIO-220ENST00000512979 TRIM47Q96LD4 638 aa11.52□□□□□ -0.57
TRIO-220ENST00000512979 PURBQ96QR8 312 aaKnown RBP11.52□□□□□ -0.57
TRIO-220ENST00000512979 AATFQ9NY61 560 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRIO-220ENST00000512979 NOP58Q9Y2X3 529 aaKnown RBP11.52□□□□□ -0.57
TRIO-220ENST00000512979 HTTP42858 3142 aa11.52□□□□□ -0.57
TRIO-220ENST00000512979 ZSWIM8A7E2V4 1837 aa11.51□□□□□ -0.57
TRIO-220ENST00000512979 BAG3O95817 575 aa11.51□□□□□ -0.57
TRIO-220ENST00000512979 CYP2E1P05181 493 aaPredicted RBP11.51□□□□□ -0.57
TRIO-220ENST00000512979 BCRP11274 1271 aa11.51□□□□□ -0.57
TRIO-220ENST00000512979 HOXD10P28358 340 aa11.51□□□□□ -0.57
TRIO-220ENST00000512979 ZAP70P43403 619 aa11.51□□□□□ -0.57
TRIO-220ENST00000512979 CEP85Q6P2H3 762 aa11.51□□□□□ -0.57
TRIO-220ENST00000512979 NPAS4Q8IUM7 802 aa11.51□□□□□ -0.57
TRIO-220ENST00000512979 PANK1Q8TE04 598 aa11.51□□□□□ -0.57
TRIO-220ENST00000512979 CCDC8Q9H0W5 538 aaPredicted RBP11.51□□□□□ -0.57
TRIO-220ENST00000512979 TLR7Q9NYK1 1049 aaKnown RBP11.51□□□□□ -0.57
TRIO-220ENST00000512979 SRRDQ9UH36 339 aa11.51□□□□□ -0.57
TRIO-220ENST00000512979 DBNLQ9UJU6 430 aaKnown RBP11.51□□□□□ -0.57
TRIO-220ENST00000512979 DNMT3AQ9Y6K1 912 aaPredicted RBP11.51□□□□□ -0.57
TRIO-220ENST00000512979 COL2A1P02458 1487 aaPredicted RBP11.51□□□□□ -0.57
TRIO-220ENST00000512979 TNRC18O15417 2968 aaPredicted RBP11.5□□□□□ -0.57
TRIO-220ENST00000512979 FCGRTP55899 365 aa11.5□□□□□ -0.57
TRIO-220ENST00000512979 MTMR3Q13615 1198 aa11.5□□□□□ -0.57
TRIO-220ENST00000512979 INTS6LQ5JSJ4 861 aaKnown RBP11.5□□□□□ -0.57
TRIO-220ENST00000512979 ADGRA1Q86SQ6 560 aa11.5□□□□□ -0.57
TRIO-220ENST00000512979 RAET1EQ8TD07 263 aa11.5□□□□□ -0.57
TRIO-220ENST00000512979 TGFBRAP1Q8WUH2 860 aa11.5□□□□□ -0.57
TRIO-220ENST00000512979 EAF2Q96CJ1 260 aaPredicted RBP11.5□□□□□ -0.57
TRIO-220ENST00000512979 ZNF512BQ96KM6 892 aaPredicted RBP11.5□□□□□ -0.57
TRIO-220ENST00000512979 PIH1D3Q9NQM4 214 aaKnown RBP11.5□□□□□ -0.57
TRIO-220ENST00000512979 ZNF358Q9NW07 568 aa11.5□□□□□ -0.57
TRIO-220ENST00000512979 SLC45A1Q9Y2W3 748 aa11.5□□□□□ -0.57
TRIO-220ENST00000512979 MYPNQ86TC9 1320 aa11.5□□□□□ -0.57
TRIO-220ENST00000512979 DOCK1Q14185 1865 aa11.49□□□□□ -0.57
TRIO-220ENST00000512979 ERVH48-1M5A8F1 160 aa11.49□□□□□ -0.57
TRIO-220ENST00000512979 ZBTB24O43167 697 aaPredicted RBP11.49□□□□□ -0.57
TRIO-220ENST00000512979 CAP2P40123 477 aa11.49□□□□□ -0.57
TRIO-220ENST00000512979 PRKCZQ05513 592 aa11.49□□□□□ -0.57
TRIO-220ENST00000512979 RRP1BQ14684 758 aaKnown RBP11.49□□□□□ -0.57
TRIO-220ENST00000512979 VASH1Q7L8A9 365 aaPredicted RBP11.49□□□□□ -0.57
TRIO-220ENST00000512979 MAPKAPK5Q8IW41 473 aa11.49□□□□□ -0.57
TRIO-220ENST00000512979 SMCR8Q8TEV9 937 aaPredicted RBP11.49□□□□□ -0.57
TRIO-220ENST00000512979 DHX36Q9H2U1 1008 aaKnown RBP11.49□□□□□ -0.57
TRIO-220ENST00000512979 PI4KBQ9UBF8 816 aa11.49□□□□□ -0.57
TRIO-220ENST00000512979 HERC5Q9UII4 1024 aaKnown RBP11.49□□□□□ -0.57
TRIO-220ENST00000512979 AGTPBP1Q9UPW5 1226 aa11.49□□□□□ -0.57
TRIO-220ENST00000512979 EXOC6BQ9Y2D4 811 aa11.49□□□□□ -0.57
TRIO-220ENST00000512979 IDH1O75874 414 aaKnown RBP11.48□□□□□ -0.57
TRIO-220ENST00000512979 CYP7A1P22680 504 aa11.48□□□□□ -0.57
TRIO-220ENST00000512979 MAPK1P28482 360 aa11.48□□□□□ -0.57
TRIO-220ENST00000512979 GRK4P32298 578 aa11.48□□□□□ -0.57
TRIO-220ENST00000512979 SPP2Q13103 211 aa11.48□□□□□ -0.57
TRIO-220ENST00000512979 ECM1Q16610 540 aa11.48□□□□□ -0.57
TRIO-220ENST00000512979 TREML2Q5T2D2 321 aa11.48□□□□□ -0.57
TRIO-220ENST00000512979 AACSQ86V21 672 aa11.48□□□□□ -0.57
TRIO-220ENST00000512979 ERC1Q8IUD2 1116 aa11.48□□□□□ -0.57
TRIO-220ENST00000512979 ZNF280CQ8ND82 737 aa11.48□□□□□ -0.57
TRIO-220ENST00000512979 FLT1P17948 1338 aa11.48□□□□□ -0.57
TRIO-220ENST00000512979 RBBP6Q7Z6E9 1792 aaKnown RBP11.48□□□□□ -0.57
TRIO-220ENST00000512979 MAST2Q6P0Q8 1798 aa11.47□□□□□ -0.57
TRIO-220ENST00000512979 VARSP26640 1264 aaKnown RBP11.47□□□□□ -0.57
TRIO-220ENST00000512979 HMGCS2P54868 508 aa11.47□□□□□ -0.57
TRIO-220ENST00000512979 DYNLL1P63167 89 aaKnown RBP11.47□□□□□ -0.57
TRIO-220ENST00000512979 TRIM32Q13049 653 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms