RNA–Protein interactions for RNA: ENST00000512923.5

SSBP2-216, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-216ENST00000512923 MTMR7Q9Y216 660 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 AFG3L2Q9Y4W6 797 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 TLL2Q9Y6L7 1015 aa11.73□□□□□ -0.53
SSBP2-216ENST00000512923 DHX16O60231 1041 aaKnown RBP11.72□□□□□ -0.53
SSBP2-216ENST00000512923 NDUFB10O96000 172 aa11.72□□□□□ -0.53
SSBP2-216ENST00000512923 PARP1P09874 1014 aaKnown RBP11.72□□□□□ -0.53
SSBP2-216ENST00000512923 SNHG28P0DPA3 235 aa11.72□□□□□ -0.53
SSBP2-216ENST00000512923 PDHBP11177 359 aa11.72□□□□□ -0.53
SSBP2-216ENST00000512923 RXRAP19793 462 aa11.72□□□□□ -0.53
SSBP2-216ENST00000512923 BACE1P56817 501 aa11.72□□□□□ -0.53
SSBP2-216ENST00000512923 GRM4Q14833 912 aa11.72□□□□□ -0.53
SSBP2-216ENST00000512923 GPATCH4Q5T3I0 446 aaKnown RBP11.72□□□□□ -0.53
SSBP2-216ENST00000512923 SLFN13Q68D06 897 aa11.72□□□□□ -0.53
SSBP2-216ENST00000512923 USP17L2Q6R6M4 530 aa11.72□□□□□ -0.53
SSBP2-216ENST00000512923 RAB11FIP4Q86YS3 637 aa11.72□□□□□ -0.53
SSBP2-216ENST00000512923 CCDC144CPQ8IYA2 1237 aa11.72□□□□□ -0.53
SSBP2-216ENST00000512923 FANCBQ8NB91 859 aa11.72□□□□□ -0.53
SSBP2-216ENST00000512923 GTF3C6Q969F1 213 aa11.72□□□□□ -0.53
SSBP2-216ENST00000512923 TMOD4Q9NZQ9 345 aa11.72□□□□□ -0.53
SSBP2-216ENST00000512923 ABT1Q9ULW3 272 aaKnown RBP11.72□□□□□ -0.53
SSBP2-216ENST00000512923 HPS5Q9UPZ3 1129 aa11.72□□□□□ -0.53
SSBP2-216ENST00000512923 CXCL11O14625 94 aa11.71□□□□□ -0.53
SSBP2-216ENST00000512923 IRF6O14896 467 aa11.71□□□□□ -0.53
SSBP2-216ENST00000512923 WDR46O15213 610 aaKnown RBP11.71□□□□□ -0.53
SSBP2-216ENST00000512923 ZBTB48P10074 688 aaPredicted RBP11.71□□□□□ -0.53
SSBP2-216ENST00000512923 SLC1A4P43007 532 aa11.71□□□□□ -0.53
SSBP2-216ENST00000512923 GNAQP50148 359 aa11.71□□□□□ -0.53
SSBP2-216ENST00000512923 CCT2P78371 535 aaKnown RBP11.71□□□□□ -0.53
SSBP2-216ENST00000512923 SCRN1Q12765 414 aa11.71□□□□□ -0.53
SSBP2-216ENST00000512923 CCDC96Q2M329 555 aa11.71□□□□□ -0.53
SSBP2-216ENST00000512923 SH3D19Q5HYK7 790 aa11.71□□□□□ -0.53
SSBP2-216ENST00000512923 CPLX2Q6PUV4 134 aaKnown RBP11.71□□□□□ -0.53
SSBP2-216ENST00000512923 WNK4Q96J92 1243 aa11.71□□□□□ -0.53
SSBP2-216ENST00000512923 HHIPL1Q96JK4 782 aa11.71□□□□□ -0.53
SSBP2-216ENST00000512923 C12orf42Q96LP6 360 aa11.71□□□□□ -0.53
SSBP2-216ENST00000512923 ISY1Q9ULR0 285 aaKnown RBP11.71□□□□□ -0.53
SSBP2-216ENST00000512923 KCNH4Q9UQ05 1017 aa11.71□□□□□ -0.53
SSBP2-216ENST00000512923 A0A0G2JLL6 359 aaPredicted RBP11.7□□□□□ -0.54
SSBP2-216ENST00000512923 CPLX1O14810 134 aa11.7□□□□□ -0.54
SSBP2-216ENST00000512923 CDKL5O76039 1030 aa11.7□□□□□ -0.54
SSBP2-216ENST00000512923 HSP90AA1P07900 732 aaKnown RBP11.7□□□□□ -0.54
SSBP2-216ENST00000512923 BMP3P12645 472 aa11.7□□□□□ -0.54
SSBP2-216ENST00000512923 APLP1P51693 650 aa11.7□□□□□ -0.54
SSBP2-216ENST00000512923 ZNF157P51786 506 aaPredicted RBP11.7□□□□□ -0.54
SSBP2-216ENST00000512923 HMGCS2P54868 508 aa11.7□□□□□ -0.54
SSBP2-216ENST00000512923 ZNF543Q08ER8 600 aa11.7□□□□□ -0.54
SSBP2-216ENST00000512923 SNAPC2Q13487 334 aa11.7□□□□□ -0.54
SSBP2-216ENST00000512923 CUL4AQ13619 759 aa11.7□□□□□ -0.54
SSBP2-216ENST00000512923 RGMBQ6NW40 437 aa11.7□□□□□ -0.54
SSBP2-216ENST00000512923 PRRT2Q7Z6L0 340 aaPredicted RBP11.7□□□□□ -0.54
SSBP2-216ENST00000512923 CCDC83Q8IWF9 413 aa11.7□□□□□ -0.54
SSBP2-216ENST00000512923 SPICE1Q8N0Z3 855 aa11.7□□□□□ -0.54
SSBP2-216ENST00000512923 NECAB1Q8N987 351 aa11.7□□□□□ -0.54
SSBP2-216ENST00000512923 PROCA1Q8NCQ7 364 aaPredicted RBP11.7□□□□□ -0.54
SSBP2-216ENST00000512923 NCOA5Q9HCD5 579 aaKnown RBP11.7□□□□□ -0.54
SSBP2-216ENST00000512923 DAXXQ9UER7 740 aaPredicted RBP11.7□□□□□ -0.54
SSBP2-216ENST00000512923 MAD2L2Q9UI95 211 aa11.7□□□□□ -0.54
SSBP2-216ENST00000512923 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.7□□□□□ -0.54
SSBP2-216ENST00000512923 PARP14Q460N5 1801 aa11.7□□□□□ -0.54
SSBP2-216ENST00000512923 FRMPD2Q68DX3 1309 aaPredicted RBP11.69□□□□□ -0.54
SSBP2-216ENST00000512923 PALM3A6NDB9 673 aaPredicted RBP11.69□□□□□ -0.54
SSBP2-216ENST00000512923 KLRF2D3W0D1 207 aa11.69□□□□□ -0.54
SSBP2-216ENST00000512923 VCAM1P19320 739 aa11.69□□□□□ -0.54
SSBP2-216ENST00000512923 CDC27P30260 824 aa11.69□□□□□ -0.54
SSBP2-216ENST00000512923 ADD1P35611 737 aaKnown RBP11.69□□□□□ -0.54
SSBP2-216ENST00000512923 GJA5P36382 358 aa11.69□□□□□ -0.54
SSBP2-216ENST00000512923 GTF2A2P52657 109 aa11.69□□□□□ -0.54
SSBP2-216ENST00000512923 SPRYD7Q5W111 196 aa11.69□□□□□ -0.54
SSBP2-216ENST00000512923 TMTC3Q6ZXV5 915 aa11.69□□□□□ -0.54
SSBP2-216ENST00000512923 RASGRP2Q7LDG7 609 aa11.69□□□□□ -0.54
SSBP2-216ENST00000512923 RASAL3Q86YV0 1011 aa11.69□□□□□ -0.54
SSBP2-216ENST00000512923 NUP88Q99567 741 aaPredicted RBP11.69□□□□□ -0.54
SSBP2-216ENST00000512923 LZTS2Q9BRK4 669 aa11.69□□□□□ -0.54
SSBP2-216ENST00000512923 LLPHQ9BRT6 129 aaKnown RBP11.69□□□□□ -0.54
SSBP2-216ENST00000512923 EMILIN3Q9NT22 766 aa11.69□□□□□ -0.54
SSBP2-216ENST00000512923 MYH6P13533 1939 aa11.69□□□□□ -0.54
SSBP2-216ENST00000512923 GTPBP6O43824 516 aaPredicted RBP11.68□□□□□ -0.54
SSBP2-216ENST00000512923 PLEKHA8P1O95397 391 aa11.68□□□□□ -0.54
SSBP2-216ENST00000512923 SLC10A3P09131 477 aa11.68□□□□□ -0.54
SSBP2-216ENST00000512923 GOLGA8HP0CJ92 632 aa11.68□□□□□ -0.54
SSBP2-216ENST00000512923 STAT2P52630 851 aa11.68□□□□□ -0.54
SSBP2-216ENST00000512923 ST3GAL1Q11201 340 aa11.68□□□□□ -0.54
SSBP2-216ENST00000512923 IKQ13123 557 aaPredicted RBP11.68□□□□□ -0.54
SSBP2-216ENST00000512923 KIAA1755Q5JYT7 1200 aa11.68□□□□□ -0.54
SSBP2-216ENST00000512923 FAM83BQ5T0W9 1011 aa11.68□□□□□ -0.54
SSBP2-216ENST00000512923 GADL1Q6ZQY3 521 aa11.68□□□□□ -0.54
SSBP2-216ENST00000512923 KCTD1Q719H9 257 aa11.68□□□□□ -0.54
SSBP2-216ENST00000512923 FASTKD5Q7L8L6 764 aaKnown RBP11.68□□□□□ -0.54
SSBP2-216ENST00000512923 FAM160B2Q86V87 743 aa11.68□□□□□ -0.54
SSBP2-216ENST00000512923 STAG2Q8N3U4 1231 aa11.68□□□□□ -0.54
SSBP2-216ENST00000512923 CCDC102AQ96A19 550 aa11.68□□□□□ -0.54
SSBP2-216ENST00000512923 INTS4Q96HW7 963 aaKnown RBP11.68□□□□□ -0.54
SSBP2-216ENST00000512923 SPZ1Q9BXG8 430 aa11.68□□□□□ -0.54
SSBP2-216ENST00000512923 TANGO6Q9C0B7 1094 aa11.68□□□□□ -0.54
SSBP2-216ENST00000512923 RPAP3Q9H6T3 665 aaPredicted RBP11.68□□□□□ -0.54
SSBP2-216ENST00000512923 GPCPD1Q9NPB8 672 aa11.68□□□□□ -0.54
SSBP2-216ENST00000512923 FAM217BQ9NTX9 383 aaPredicted RBP11.68□□□□□ -0.54
SSBP2-216ENST00000512923 TMEM232C9JQI7 657 aa11.67□□□□□ -0.54
SSBP2-216ENST00000512923 PLA2G6O60733 806 aa11.67□□□□□ -0.54
SSBP2-216ENST00000512923 CETPP11597 493 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms