RNA–Protein interactions for RNA: ENST00000512868.6

SERF1A-208, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 4

Gene SERF1A, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-208ENST00000512868 RIOX2Q8IUF8 465 aa17.1■□□□□ 0.33
SERF1A-208ENST00000512868 ENAHQ8N8S7 591 aaPredicted RBP17.1■□□□□ 0.33
SERF1A-208ENST00000512868 PNMA1Q8ND90 353 aa17.1■□□□□ 0.33
SERF1A-208ENST00000512868 SLC38A10Q9HBR0 1119 aa17.1■□□□□ 0.33
SERF1A-208ENST00000512868 BIN2Q9UBW5 565 aaPredicted RBP17.1■□□□□ 0.33
SERF1A-208ENST00000512868 MTMR7Q9Y216 660 aa17.1■□□□□ 0.33
SERF1A-208ENST00000512868 PDHBP11177 359 aa17.09■□□□□ 0.33
SERF1A-208ENST00000512868 MORN1Q5T089 497 aa17.09■□□□□ 0.33
SERF1A-208ENST00000512868 ABRAQ8N0Z2 381 aa17.09■□□□□ 0.33
SERF1A-208ENST00000512868 NKX2-3Q8TAU0 364 aa17.09■□□□□ 0.33
SERF1A-208ENST00000512868 ZNF333Q96JL9 665 aa17.09■□□□□ 0.33
SERF1A-208ENST00000512868 MTA3Q9BTC8 594 aa17.09■□□□□ 0.33
SERF1A-208ENST00000512868 SLC5A4Q9NY91 659 aa17.09■□□□□ 0.33
SERF1A-208ENST00000512868 ZNF214Q9UL59 606 aaPredicted RBP17.09■□□□□ 0.33
SERF1A-208ENST00000512868 IFIT3O14879 490 aaKnown RBP17.08■□□□□ 0.32
SERF1A-208ENST00000512868 EPB41L2O43491 1005 aaKnown RBP17.08■□□□□ 0.32
SERF1A-208ENST00000512868 EIF5BO60841 1220 aaKnown RBP17.08■□□□□ 0.32
SERF1A-208ENST00000512868 SNHG28P0DPA3 235 aa17.08■□□□□ 0.32
SERF1A-208ENST00000512868 MCM5P33992 734 aa17.08■□□□□ 0.32
SERF1A-208ENST00000512868 KRT32Q14532 448 aa17.08■□□□□ 0.32
SERF1A-208ENST00000512868 BTNL9Q6UXG8 535 aa17.08■□□□□ 0.32
SERF1A-208ENST00000512868 CYB5R4Q7L1T6 521 aa17.08■□□□□ 0.32
SERF1A-208ENST00000512868 REPS2Q8NFH8 660 aa17.08■□□□□ 0.32
SERF1A-208ENST00000512868 SH3TC2Q8TF17 1288 aa17.08■□□□□ 0.32
SERF1A-208ENST00000512868 TMEM106CQ9BVX2 250 aa17.08■□□□□ 0.32
SERF1A-208ENST00000512868 PNMA2Q9UL42 364 aa17.08■□□□□ 0.32
SERF1A-208ENST00000512868 HTTP42858 3142 aa17.08■□□□□ 0.32
SERF1A-208ENST00000512868 FCER1AP12319 257 aa17.07■□□□□ 0.32
SERF1A-208ENST00000512868 CYP2B6P20813 491 aa17.07■□□□□ 0.32
SERF1A-208ENST00000512868 ZNF543Q08ER8 600 aa17.07■□□□□ 0.32
SERF1A-208ENST00000512868 MAP2K5Q13163 448 aa17.07■□□□□ 0.32
SERF1A-208ENST00000512868 GRB14Q14449 540 aa17.07■□□□□ 0.32
SERF1A-208ENST00000512868 KCTD2Q14681 263 aa17.07■□□□□ 0.32
SERF1A-208ENST00000512868 SNRNP48Q6IEG0 339 aaKnown RBP17.07■□□□□ 0.32
SERF1A-208ENST00000512868 STOX1Q6ZVD7 989 aa17.07■□□□□ 0.32
SERF1A-208ENST00000512868 DPP9Q86TI2 863 aa17.07■□□□□ 0.32
SERF1A-208ENST00000512868 CPXCR1Q8N123 301 aa17.07■□□□□ 0.32
SERF1A-208ENST00000512868 USP6NLQ92738 828 aa17.07■□□□□ 0.32
SERF1A-208ENST00000512868 CHMP4CQ96CF2 233 aa17.07■□□□□ 0.32
SERF1A-208ENST00000512868 APBA2Q99767 749 aa17.07■□□□□ 0.32
SERF1A-208ENST00000512868 FBXO40Q9UH90 709 aa17.07■□□□□ 0.32
SERF1A-208ENST00000512868 PRR12Q9ULL5 1215 aa17.07■□□□□ 0.32
SERF1A-208ENST00000512868 LAMA4Q16363 1823 aa17.06■□□□□ 0.32
SERF1A-208ENST00000512868 HMGCRP04035 888 aa17.06■□□□□ 0.32
SERF1A-208ENST00000512868 HOXC6P09630 235 aa17.06■□□□□ 0.32
SERF1A-208ENST00000512868 WTAPQ15007 396 aa17.06■□□□□ 0.32
SERF1A-208ENST00000512868 SEC23AQ15436 765 aa17.06■□□□□ 0.32
SERF1A-208ENST00000512868 TSGA10IPQ3SY00 556 aa17.06■□□□□ 0.32
SERF1A-208ENST00000512868 ASPRV1Q53RT3 343 aa17.06■□□□□ 0.32
SERF1A-208ENST00000512868 MB21D2Q8IYB1 491 aaPredicted RBP17.06■□□□□ 0.32
SERF1A-208ENST00000512868 TMTC2Q8N394 836 aa17.06■□□□□ 0.32
SERF1A-208ENST00000512868 TMEM87BQ96K49 555 aa17.06■□□□□ 0.32
SERF1A-208ENST00000512868 GPCPD1Q9NPB8 672 aa17.06■□□□□ 0.32
SERF1A-208ENST00000512868 TAF6LQ9Y6J9 622 aa17.06■□□□□ 0.32
SERF1A-208ENST00000512868 FRMPD2Q68DX3 1309 aaPredicted RBP17.05■□□□□ 0.32
SERF1A-208ENST00000512868 PARP1P09874 1014 aaKnown RBP17.05■□□□□ 0.32
SERF1A-208ENST00000512868 ELNP15502 786 aa17.05■□□□□ 0.32
SERF1A-208ENST00000512868 TMEM67Q5HYA8 995 aa17.05■□□□□ 0.32
SERF1A-208ENST00000512868 SYDE2Q5VT97 1194 aa17.05■□□□□ 0.32
SERF1A-208ENST00000512868 CHST13Q8NET6 341 aa17.05■□□□□ 0.32
SERF1A-208ENST00000512868 RAVER2Q9HCJ3 691 aaKnown RBP17.05■□□□□ 0.32
SERF1A-208ENST00000512868 PRC1O43663 620 aa17.04■□□□□ 0.32
SERF1A-208ENST00000512868 INHAP05111 366 aa17.04■□□□□ 0.32
SERF1A-208ENST00000512868 HMGB1P09429 215 aaKnown RBP17.04■□□□□ 0.32
SERF1A-208ENST00000512868 ADORA2AP29274 412 aa17.04■□□□□ 0.32
SERF1A-208ENST00000512868 SLC4A3P48751 1232 aa17.04■□□□□ 0.32
SERF1A-208ENST00000512868 TKFCQ3LXA3 575 aa17.04■□□□□ 0.32
SERF1A-208ENST00000512868 CATIPQ7Z7H3 387 aa17.04■□□□□ 0.32
SERF1A-208ENST00000512868 NEK1Q96PY6 1258 aa17.04■□□□□ 0.32
SERF1A-208ENST00000512868 MMP19Q99542 508 aa17.04■□□□□ 0.32
SERF1A-208ENST00000512868 A0A0G2JMZ2 1700 aa17.04■□□□□ 0.32
SERF1A-208ENST00000512868 ICAM1P05362 532 aa17.03■□□□□ 0.32
SERF1A-208ENST00000512868 CAPN2P17655 700 aa17.03■□□□□ 0.32
SERF1A-208ENST00000512868 HSPA4P34932 840 aa17.03■□□□□ 0.32
SERF1A-208ENST00000512868 SLC16A2P36021 539 aa17.03■□□□□ 0.32
SERF1A-208ENST00000512868 TTBK2Q6IQ55 1244 aa17.03■□□□□ 0.32
SERF1A-208ENST00000512868 RASGRP2Q7LDG7 609 aa17.03■□□□□ 0.32
SERF1A-208ENST00000512868 CHST3Q7LGC8 479 aa17.03■□□□□ 0.32
SERF1A-208ENST00000512868 IGDCC4Q8TDY8 1250 aa17.03■□□□□ 0.32
SERF1A-208ENST00000512868 RANBP17Q9H2T7 1088 aaKnown RBP17.03■□□□□ 0.32
SERF1A-208ENST00000512868 WDR19Q8NEZ3 1342 aa17.02■□□□□ 0.32
SERF1A-208ENST00000512868 GOLGA8HP0CJ92 632 aa17.02■□□□□ 0.32
SERF1A-208ENST00000512868 CCL5P13501 91 aa17.02■□□□□ 0.32
SERF1A-208ENST00000512868 LIFRP42702 1097 aa17.02■□□□□ 0.32
SERF1A-208ENST00000512868 SOX10P56693 466 aa17.02■□□□□ 0.32
SERF1A-208ENST00000512868 ANTXR2P58335 489 aa17.02■□□□□ 0.32
SERF1A-208ENST00000512868 MFSD14CQ5VZR4 134 aa17.02■□□□□ 0.32
SERF1A-208ENST00000512868 CCDC174Q6PII3 467 aa17.02■□□□□ 0.32
SERF1A-208ENST00000512868 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.02■□□□□ 0.32
SERF1A-208ENST00000512868 ANKRD35Q8N283 1001 aa17.02■□□□□ 0.32
SERF1A-208ENST00000512868 TRIB2Q92519 343 aa17.02■□□□□ 0.32
SERF1A-208ENST00000512868 DDX11Q96FC9 970 aa17.02■□□□□ 0.32
SERF1A-208ENST00000512868 RNF208Q9H0X6 261 aa17.02■□□□□ 0.32
SERF1A-208ENST00000512868 CCPG1Q9ULG6 757 aa17.02■□□□□ 0.32
SERF1A-208ENST00000512868 DIS3Q9Y2L1 958 aaKnown RBP17.02■□□□□ 0.32
SERF1A-208ENST00000512868 RIPK3Q9Y572 518 aa17.02■□□□□ 0.32
SERF1A-208ENST00000512868 ZNF536O15090 1300 aa17.01■□□□□ 0.31
SERF1A-208ENST00000512868 CCDC69A6NI79 296 aa17.01■□□□□ 0.31
SERF1A-208ENST00000512868 MYCP01106 439 aaPredicted RBP17.01■□□□□ 0.31
SERF1A-208ENST00000512868 OLFML2BQ68BL8 750 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms