RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 VEZTQ9HBM0 779 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 KIAA1468Q9P260 1216 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 ZNF70Q9UC06 446 aaPredicted RBP10.98□□□□□ -0.65
MSH3-203ENST00000512531 PDS5AQ29RF7 1337 aaKnown RBP10.98□□□□□ -0.65
MSH3-203ENST00000512531 LAMA4Q16363 1823 aa10.98□□□□□ -0.65
MSH3-203ENST00000512531 KLF18A0A0U1RQI7 1052 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 F8W031 263 aaPredicted RBP10.97□□□□□ -0.65
MSH3-203ENST00000512531 SNAP23O00161 211 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 WDHD1O75717 1129 aaPredicted RBP10.97□□□□□ -0.65
MSH3-203ENST00000512531 GNRH1P01148 92 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 PTMAP06454 111 aaKnown RBP10.97□□□□□ -0.65
MSH3-203ENST00000512531 HIBADHP31937 336 aaKnown RBP10.97□□□□□ -0.65
MSH3-203ENST00000512531 METAP2P50579 478 aaKnown RBP eCLIP10.97□□□□□ -0.65
MSH3-203ENST00000512531 RBM5P52756 815 aaKnown RBP eCLIP10.97□□□□□ -0.65
MSH3-203ENST00000512531 USP46P62068 366 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 SAFBQ15424 915 aaKnown RBP eCLIP10.97□□□□□ -0.65
MSH3-203ENST00000512531 SF3A1Q15459 793 aaKnown RBP10.97□□□□□ -0.65
MSH3-203ENST00000512531 MFSD14BQ5SR56 506 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 FKBP1CQ5VVH2 108 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 STOX1Q6ZVD7 989 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 NBPF11Q86T75 865 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 MB21D2Q8IYB1 491 aaPredicted RBP10.97□□□□□ -0.65
MSH3-203ENST00000512531 TRIM22Q8IYM9 498 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 NSUN7Q8NE18 718 aaKnown RBP10.97□□□□□ -0.65
MSH3-203ENST00000512531 CD99L2Q8TCZ2 262 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 TBC1D22AQ8WUA7 517 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 PBXIP1Q96AQ6 731 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 OPTNQ96CV9 577 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 HOOK2Q96ED9 719 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 DDX11Q96FC9 970 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 KCNK17Q96T54 332 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 TNMDQ9H2S6 317 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 ALG2Q9H553 416 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 ZFYVE28Q9HCC9 887 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 FZD1Q9UP38 647 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 PCDHAC2Q9Y5I4 1007 aa10.97□□□□□ -0.65
MSH3-203ENST00000512531 XBP1P17861 261 aa10.96□□□□□ -0.65
MSH3-203ENST00000512531 LIFRP42702 1097 aa10.96□□□□□ -0.65
MSH3-203ENST00000512531 PRMT2P55345 433 aa10.96□□□□□ -0.65
MSH3-203ENST00000512531 HAND2P61296 217 aa10.96□□□□□ -0.65
MSH3-203ENST00000512531 RASGRF1Q13972 1273 aa10.96□□□□□ -0.65
MSH3-203ENST00000512531 GIMAP6Q6P9H5 292 aa10.96□□□□□ -0.65
MSH3-203ENST00000512531 SASS6Q6UVJ0 657 aa10.96□□□□□ -0.65
MSH3-203ENST00000512531 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.96□□□□□ -0.65
MSH3-203ENST00000512531 GAS2L3Q86XJ1 694 aa10.96□□□□□ -0.65
MSH3-203ENST00000512531 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.96□□□□□ -0.65
MSH3-203ENST00000512531 KCNG4Q8TDN1 519 aa10.96□□□□□ -0.65
MSH3-203ENST00000512531 ZNF333Q96JL9 665 aa10.96□□□□□ -0.65
MSH3-203ENST00000512531 FAM84BQ96KN1 310 aaPredicted RBP10.96□□□□□ -0.65
MSH3-203ENST00000512531 STRBPQ96SI9 672 aaKnown RBP10.96□□□□□ -0.65
MSH3-203ENST00000512531 NOL10Q9BSC4 688 aaKnown RBP10.96□□□□□ -0.65
MSH3-203ENST00000512531 ZBED2Q9BTP6 218 aa10.96□□□□□ -0.65
MSH3-203ENST00000512531 PIH1D3Q9NQM4 214 aaKnown RBP10.96□□□□□ -0.65
MSH3-203ENST00000512531 RAI14Q9P0K7 980 aa10.96□□□□□ -0.65
MSH3-203ENST00000512531 TTF2Q9UNY4 1162 aaKnown RBP10.96□□□□□ -0.65
MSH3-203ENST00000512531 SUGT1Q9Y2Z0 365 aa10.96□□□□□ -0.65
MSH3-203ENST00000512531 CSADQ9Y600 493 aa10.96□□□□□ -0.65
MSH3-203ENST00000512531 SLC12A7Q9Y666 1083 aa10.96□□□□□ -0.65
MSH3-203ENST00000512531 SLC4A4Q9Y6R1 1079 aa10.96□□□□□ -0.65
MSH3-203ENST00000512531 TCHHQ07283 1943 aa10.96□□□□□ -0.66
MSH3-203ENST00000512531 MAGEB6P1A0A0J9YX57 407 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 ZBTB43O43298 467 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 GADD45BO75293 160 aaPredicted RBP10.95□□□□□ -0.66
MSH3-203ENST00000512531 MBD4O95243 580 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 CYP7A1P22680 504 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 CRKP46108 304 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 CCT2P78371 535 aaKnown RBP10.95□□□□□ -0.66
MSH3-203ENST00000512531 GSTO1P78417 241 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 AKAP17AQ02040 695 aaKnown RBP10.95□□□□□ -0.66
MSH3-203ENST00000512531 ST3GAL1Q11201 340 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 RESTQ13127 1097 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 TAF1CQ15572 869 aaPredicted RBP10.95□□□□□ -0.66
MSH3-203ENST00000512531 TMEM67Q5HYA8 995 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 AKNAD1Q5T1N1 836 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 POTEEQ6S8J3 1075 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 FBXO33Q7Z6M2 555 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 FERMT3Q86UX7 667 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 FAM83AQ86UY5 434 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 IFNL3Q8IZI9 196 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 LEO1Q8WVC0 666 aaPredicted RBP10.95□□□□□ -0.66
MSH3-203ENST00000512531 BRI3BPQ8WY22 251 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 ESR2Q92731 530 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 CCDC34Q96HJ3 373 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 UBAC1Q9BSL1 405 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 LRRC2Q9BYS8 371 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 PANK2Q9BZ23 570 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 PPP1R12CQ9BZL4 782 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 ELP3Q9H9T3 547 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 TOMM22Q9NS69 142 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 ORC3Q9UBD5 711 aaPredicted RBP10.95□□□□□ -0.66
MSH3-203ENST00000512531 DOCK2Q92608 1830 aa10.95□□□□□ -0.66
MSH3-203ENST00000512531 CCL15-CCL14A0A0B4J2E2 113 aa10.94□□□□□ -0.66
MSH3-203ENST00000512531 TCRBV5S4A2TA0A5A2 114 aa10.94□□□□□ -0.66
MSH3-203ENST00000512531 ESPNB1AK53 854 aa10.94□□□□□ -0.66
MSH3-203ENST00000512531 IFIT3O14879 490 aaKnown RBP10.94□□□□□ -0.66
MSH3-203ENST00000512531 JAK2O60674 1132 aa10.94□□□□□ -0.66
MSH3-203ENST00000512531 KINO60870 393 aaKnown RBP10.94□□□□□ -0.66
MSH3-203ENST00000512531 CALM1P0DP23 149 aa10.94□□□□□ -0.66
MSH3-203ENST00000512531 CALM2P0DP24 149 aa10.94□□□□□ -0.66
MSH3-203ENST00000512531 CALM3P0DP25 149 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms