RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 SOWAHDA6NJG2 315 aa13.39□□□□□ -0.27
PRDM16-207ENST00000512462 RBM6P78332 1123 aaKnown RBP13.39□□□□□ -0.27
PRDM16-207ENST00000512462 CALCRLQ16602 461 aa13.39□□□□□ -0.27
PRDM16-207ENST00000512462 SV2BQ7L1I2 683 aa13.39□□□□□ -0.27
PRDM16-207ENST00000512462 STAG1Q8WVM7 1258 aa13.39□□□□□ -0.27
PRDM16-207ENST00000512462 TEX33O43247 280 aa13.39□□□□□ -0.27
PRDM16-207ENST00000512462 SSR1P43307 286 aaKnown RBP13.39□□□□□ -0.27
PRDM16-207ENST00000512462 MRPS25P82663 173 aaKnown RBP13.39□□□□□ -0.27
PRDM16-207ENST00000512462 CUL4BQ13620 913 aa13.39□□□□□ -0.27
PRDM16-207ENST00000512462 SYCP1Q15431 976 aa13.39□□□□□ -0.27
PRDM16-207ENST00000512462 SRBD1Q8N5C6 995 aaKnown RBP13.39□□□□□ -0.27
PRDM16-207ENST00000512462 IRX2Q9BZI1 471 aaPredicted RBP13.39□□□□□ -0.27
PRDM16-207ENST00000512462 FOXP1Q9H334 677 aaPredicted RBP13.39□□□□□ -0.27
PRDM16-207ENST00000512462 ERLIN1O75477 346 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 RPS6KA4O75676 772 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 SLURP2P0DP57 97 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 RAPGEF1Q13905 1077 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 IQCB1Q15051 598 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 METTL16Q86W50 562 aaKnown RBP13.38□□□□□ -0.27
PRDM16-207ENST00000512462 ACRBPQ8NEB7 543 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 KANSL2Q9H9L4 492 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 NARFQ9UHQ1 456 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 XDHP47989 1333 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 TBCKQ8TEA7 893 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 FERMT2Q96AC1 680 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 PPP1R13BQ96KQ4 1090 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 PPP2R2CQ9Y2T4 447 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.38□□□□□ -0.27
PRDM16-207ENST00000512462 XIRP1Q702N8 1843 aaKnown RBP13.38□□□□□ -0.27
PRDM16-207ENST00000512462 PPP6R2O75170 966 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 LMAN1P49257 510 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 PLCD1P51178 756 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 PPP2R3AQ06190 1150 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 SPAG1Q07617 926 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 MORC3Q14149 939 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 NKX1-1Q15270 411 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-207ENST00000512462 NSUN4Q96CB9 384 aaKnown RBP13.38□□□□□ -0.27
PRDM16-207ENST00000512462 GTPBP4Q9BZE4 634 aaKnown RBP13.38□□□□□ -0.27
PRDM16-207ENST00000512462 TMEM260Q9NX78 707 aa13.38□□□□□ -0.27
PRDM16-207ENST00000512462 CTAGE9A4FU28 777 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 KCNJ18B7U540 433 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 TBCAO75347 108 aaKnown RBP13.37□□□□□ -0.27
PRDM16-207ENST00000512462 ADCY7P51828 1080 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 KCNJ12Q14500 433 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 MTF1Q14872 753 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 LRP10Q7Z4F1 713 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 GJA3Q9Y6H8 435 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 ARHGAP6O43182 974 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 CDK8P49336 464 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 NKX2-3Q8TAU0 364 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 USP17L5A8MUK1 530 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 MEIS1O00470 390 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 RAD17O75943 681 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 RPN1P04843 607 aaKnown RBP13.37□□□□□ -0.27
PRDM16-207ENST00000512462 RBL2Q08999 1139 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 HLTFQ14527 1009 aaKnown RBP eCLIP13.37□□□□□ -0.27
PRDM16-207ENST00000512462 PRR16Q569H4 304 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 TYW1BQ6NUM6 668 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 TMTC3Q6ZXV5 915 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 KIFC2Q96AC6 838 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 TMEM47Q9BQJ4 181 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 ARFGAP3Q9NP61 516 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 SPATA31A1Q5TZJ5 1347 aa13.37□□□□□ -0.27
PRDM16-207ENST00000512462 C5P01031 1676 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 PPIP5K2O43314 1243 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 USO1O60763 962 aaKnown RBP13.36□□□□□ -0.27
PRDM16-207ENST00000512462 SEC31AO94979 1220 aaKnown RBP13.36□□□□□ -0.27
PRDM16-207ENST00000512462 MMP10P09238 476 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 PTPREP23469 700 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 CTAGE15A4D2H0 777 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 B4DLN1 442 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 CTAGE8P0CG41 777 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 VEGFAP15692 232 aaPredicted RBP13.36□□□□□ -0.27
PRDM16-207ENST00000512462 ETF1P62495 437 aaKnown RBP13.36□□□□□ -0.27
PRDM16-207ENST00000512462 FMR1Q06787 632 aaKnown RBP eCLIP13.36□□□□□ -0.27
PRDM16-207ENST00000512462 ILDR1Q86SU0 546 aaPredicted RBP13.36□□□□□ -0.27
PRDM16-207ENST00000512462 CTAGE6Q86UF2 777 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 CTAGE4Q8IX94 777 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 KRT222Q8N1A0 295 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 LARGE2Q8N3Y3 721 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 CEP95Q96GE4 821 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 PAGE5Q96GU1 130 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 CD209Q9NNX6 404 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 POTEMA6NI47 508 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 ZMYND10O75800 440 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 MRPL12P52815 198 aaKnown RBP13.36□□□□□ -0.27
PRDM16-207ENST00000512462 MIGA2Q7L4E1 593 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 PLA2G4DQ86XP0 818 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 CNGA4Q8IV77 575 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 KCNB2Q92953 911 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 TEKT1Q969V4 418 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 PLA2G12BQ9BX93 195 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 KCNG1Q9UIX4 513 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 PLEKHG2Q9H7P9 1386 aa13.36□□□□□ -0.27
PRDM16-207ENST00000512462 GPSM2P81274 684 aa13.35□□□□□ -0.27
PRDM16-207ENST00000512462 GRAPQ13588 217 aa13.35□□□□□ -0.27
PRDM16-207ENST00000512462 RESP18Q5W5W9 173 aa13.35□□□□□ -0.27
PRDM16-207ENST00000512462 GRAPLQ8TC17 118 aaPredicted RBP13.35□□□□□ -0.27
PRDM16-207ENST00000512462 FAM107BQ9H098 131 aa13.35□□□□□ -0.27
PRDM16-207ENST00000512462 PKD1L3Q7Z443 1732 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms