RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 C21orf2O43822 256 aa14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 GAS7O60861 476 aa14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 CTR9Q6PD62 1173 aa14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 KCTD1Q719H9 257 aa14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 MRFAP1L1Q96HT8 127 aa14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 PCDHB6Q9Y5E3 794 aa14.64□□□□□ -0.07
PCDHA4-202ENST00000512229 PRR5LQ6MZQ0 368 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 GSDMAQ96QA5 445 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 LAD1O00515 517 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 SLC16A2P36021 539 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 RCAN1P53805 252 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 CKAP4Q07065 602 aaKnown RBP14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 CCDC84Q86UT8 332 aaPredicted RBP14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 NSUN4Q96CB9 384 aaKnown RBP14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 DDX25Q9UHL0 483 aaKnown RBP14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 CNTNAP4Q9C0A0 1308 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 KDM3AQ9Y4C1 1321 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 MACROD2A1Z1Q3 448 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 DKC1O60832 514 aaKnown RBP eCLIP14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 GDF11O95390 407 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 ALAS1P13196 640 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 GPSM2P81274 684 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 RTKN2Q8IZC4 609 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 UBN2Q6ZU65 1347 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 GCOM1H8Y6P7 765 aaPredicted RBP14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 POLR2MP0CAP2 368 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 SMTNP53814 917 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 HLTFQ14527 1009 aaKnown RBP eCLIP14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 DPCR1Q3MIW9 517 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 TPH2Q8IWU9 490 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 NELFCDQ8IXH7 590 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 SLC44A5Q8NCS7 719 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 TDRD7Q8NHU6 1098 aaKnown RBP14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 NUP58Q9BVL2 599 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 IMPG2Q9BZV3 1241 aa14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 RNF216Q9NWF9 866 aaPredicted RBP14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 CWC15Q9P013 229 aaKnown RBP14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 V9GYY5 206 aaPredicted RBP14.63□□□□□ -0.07
PCDHA4-202ENST00000512229 CDC27P30260 824 aa14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 CCDC122Q5T0U0 273 aa14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 TAF3Q5VWG9 929 aa14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 SP8Q8IXZ3 490 aa14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 SRPRBQ9Y5M8 271 aaKnown RBP14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 SALL3Q9BXA9 1300 aa14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 CCDC169A6NNP5 214 aa14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 SLFN14P0C7P3 912 aa14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 ERCC3P19447 782 aa14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 TBCKQ8TEA7 893 aa14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 COA7Q96BR5 231 aa14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 MROH7-TTC4A0A0A0MT08 1334 aa14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 RAPGEF1Q13905 1077 aa14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 TMTC1Q8IUR5 882 aa14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 SLFN12Q8IYM2 578 aa14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 FNBP4Q8N3X1 1017 aaPredicted RBP14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 MYCT1Q8N699 235 aa14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 TMEM47Q9BQJ4 181 aa14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 AS3MTQ9HBK9 375 aa14.62□□□□□ -0.07
PCDHA4-202ENST00000512229 STK36Q9NRP7 1315 aa14.61□□□□□ -0.07
PCDHA4-202ENST00000512229 SPATA1Q5VX52 437 aa14.61□□□□□ -0.07
PCDHA4-202ENST00000512229 MAEAQ7L5Y9 396 aa14.61□□□□□ -0.07
PCDHA4-202ENST00000512229 hCG_1984214I3L0E3 225 aa14.61□□□□□ -0.07
PCDHA4-202ENST00000512229 BMP3P12645 472 aa14.61□□□□□ -0.07
PCDHA4-202ENST00000512229 CACNB3P54284 484 aa14.61□□□□□ -0.07
PCDHA4-202ENST00000512229 ARHGAP27Q6ZUM4 889 aa14.61□□□□□ -0.07
PCDHA4-202ENST00000512229 ZNF713Q8N859 430 aaPredicted RBP14.61□□□□□ -0.07
PCDHA4-202ENST00000512229 AK8Q96MA6 479 aa14.61□□□□□ -0.07
PCDHA4-202ENST00000512229 A0A087WWV3 80 aa14.61□□□□□ -0.07
PCDHA4-202ENST00000512229 RPN1P04843 607 aaKnown RBP14.61□□□□□ -0.07
PCDHA4-202ENST00000512229 CRKP46108 304 aa14.61□□□□□ -0.07
PCDHA4-202ENST00000512229 CYP26C1Q6V0L0 522 aa14.61□□□□□ -0.07
PCDHA4-202ENST00000512229 CEP112Q8N8E3 955 aa14.61□□□□□ -0.07
PCDHA4-202ENST00000512229 ATF5Q9Y2D1 282 aaPredicted RBP14.61□□□□□ -0.07
PCDHA4-202ENST00000512229 TAF6LQ9Y6J9 622 aa14.61□□□□□ -0.07
PCDHA4-202ENST00000512229 NMT2O60551 498 aa14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 CDC25AP30304 524 aa14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 CBX1P83916 185 aa14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 CTNNBL1Q8WYA6 563 aaPredicted RBP14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 PGBD1Q96JS3 809 aa14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 MRPL44Q9H9J2 332 aaKnown RBP14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 CSADQ9Y600 493 aa14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 UBR1Q8IWV7 1749 aa14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 CALUO43852 315 aaPredicted RBP14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 FLOT1O75955 427 aa14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 BMS1Q14692 1282 aaKnown RBP14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 GPBP1Q86WP2 473 aa14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 CRAMP1Q96RY5 1269 aa14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 ZNF408Q9H9D4 720 aa14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 ARFGAP3Q9NP61 516 aa14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 COL5A2P05997 1499 aaPredicted RBP14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 CCDC66A2RUB6 948 aa14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 GCNT3O95395 438 aa14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 LRMPQ12912 555 aa14.6□□□□□ -0.07
PCDHA4-202ENST00000512229 ERCC5P28715 1186 aaPredicted RBP14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 NLRX1Q86UT6 975 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 MYOCDQ8IZQ8 938 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 LMBR1Q8WVP7 490 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 PLVAPQ9BX97 442 aa14.59□□□□□ -0.07
PCDHA4-202ENST00000512229 CUEDC2Q9H467 287 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms