RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 SPICE1Q8N0Z3 855 aa14.04□□□□□ -0.16
RNF4-216ENST00000511859 LENG1Q96BZ8 264 aaPredicted RBP14.04□□□□□ -0.16
RNF4-216ENST00000511859 PPP1R12CQ9BZL4 782 aa14.04□□□□□ -0.16
RNF4-216ENST00000511859 VCPKMTQ9H867 229 aa14.04□□□□□ -0.16
RNF4-216ENST00000511859 SWAP70Q9UH65 585 aa14.04□□□□□ -0.16
RNF4-216ENST00000511859 GPR37L1O60883 481 aa14.03□□□□□ -0.16
RNF4-216ENST00000511859 C6orf222P0C671 652 aaPredicted RBP14.03□□□□□ -0.16
RNF4-216ENST00000511859 OS9Q13438 667 aaPredicted RBP14.03□□□□□ -0.16
RNF4-216ENST00000511859 SIAH1Q8IUQ4 282 aa14.03□□□□□ -0.16
RNF4-216ENST00000511859 FAM126BQ8IXS8 530 aa14.03□□□□□ -0.16
RNF4-216ENST00000511859 RIOK1Q9BRS2 568 aaKnown RBP14.03□□□□□ -0.16
RNF4-216ENST00000511859 MCM9Q9NXL9 1143 aa14.03□□□□□ -0.16
RNF4-216ENST00000511859 COG5Q9UP83 839 aa14.03□□□□□ -0.16
RNF4-216ENST00000511859 YBX2Q9Y2T7 364 aaKnown RBP14.03□□□□□ -0.16
RNF4-216ENST00000511859 MYH8P13535 1937 aa14.02□□□□□ -0.16
RNF4-216ENST00000511859 VWA5AO00534 786 aa14.02□□□□□ -0.17
RNF4-216ENST00000511859 SNAI1O95863 264 aaPredicted RBP14.02□□□□□ -0.17
RNF4-216ENST00000511859 CD4P01730 458 aa14.02□□□□□ -0.17
RNF4-216ENST00000511859 KCNQ1P51787 676 aa14.02□□□□□ -0.17
RNF4-216ENST00000511859 GJA9P57773 515 aa14.02□□□□□ -0.17
RNF4-216ENST00000511859 SKIV2LQ15477 1246 aaKnown RBP14.02□□□□□ -0.17
RNF4-216ENST00000511859 GNASQ5JWF2 1037 aa14.02□□□□□ -0.17
RNF4-216ENST00000511859 PPP2R2DQ66LE6 453 aa14.02□□□□□ -0.17
RNF4-216ENST00000511859 SAMD1Q6SPF0 538 aaPredicted RBP14.02□□□□□ -0.17
RNF4-216ENST00000511859 TRMT2AQ8IZ69 625 aaKnown RBP14.02□□□□□ -0.17
RNF4-216ENST00000511859 RPUSD2Q8IZ73 545 aaKnown RBP14.02□□□□□ -0.17
RNF4-216ENST00000511859 MICALL1Q8N3F8 863 aa14.02□□□□□ -0.17
RNF4-216ENST00000511859 PCDHA11Q9Y5I1 949 aa14.02□□□□□ -0.17
RNF4-216ENST00000511859 BRWD1Q9NSI6 2320 aa14.01□□□□□ -0.17
RNF4-216ENST00000511859 MAGEB6P1A0A0J9YX57 407 aa14.01□□□□□ -0.17
RNF4-216ENST00000511859 MYADML2A6NDP7 307 aa14.01□□□□□ -0.17
RNF4-216ENST00000511859 GTPBP6O43824 516 aaPredicted RBP14.01□□□□□ -0.17
RNF4-216ENST00000511859 CYP2C18P33260 490 aa14.01□□□□□ -0.17
RNF4-216ENST00000511859 ICA1Q05084 483 aa14.01□□□□□ -0.17
RNF4-216ENST00000511859 ACVR2BQ13705 512 aa14.01□□□□□ -0.17
RNF4-216ENST00000511859 OTOP2Q7RTS6 562 aa14.01□□□□□ -0.17
RNF4-216ENST00000511859 ZNF467Q7Z7K2 595 aaPredicted RBP14.01□□□□□ -0.17
RNF4-216ENST00000511859 DDX11Q96FC9 970 aa14.01□□□□□ -0.17
RNF4-216ENST00000511859 CCDC17Q96LX7 622 aa14.01□□□□□ -0.17
RNF4-216ENST00000511859 SEZ6LQ9BYH1 1024 aa14.01□□□□□ -0.17
RNF4-216ENST00000511859 CRNKL1Q9BZJ0 848 aaKnown RBP14.01□□□□□ -0.17
RNF4-216ENST00000511859 UPF3AQ9H1J1 476 aaKnown RBP14.01□□□□□ -0.17
RNF4-216ENST00000511859 DBNLQ9UJU6 430 aaKnown RBP14.01□□□□□ -0.17
RNF4-216ENST00000511859 ZHX1Q9UKY1 873 aaPredicted RBP14.01□□□□□ -0.17
RNF4-216ENST00000511859 ZNF214Q9UL59 606 aaPredicted RBP14.01□□□□□ -0.17
RNF4-216ENST00000511859 SLC4A7Q9Y6M7 1214 aa14.01□□□□□ -0.17
RNF4-216ENST00000511859 TLL1O43897 1013 aa14□□□□□ -0.17
RNF4-216ENST00000511859 NKX3-2P78367 333 aa14□□□□□ -0.17
RNF4-216ENST00000511859 POLA2Q14181 598 aa14□□□□□ -0.17
RNF4-216ENST00000511859 ABHD16BQ9H3Z7 469 aa14□□□□□ -0.17
RNF4-216ENST00000511859 HIPK3Q9H422 1215 aa14□□□□□ -0.17
RNF4-216ENST00000511859 PPP1R9AQ9ULJ8 1098 aa14□□□□□ -0.17
RNF4-216ENST00000511859 MCM3APO60318 1980 aa14□□□□□ -0.17
RNF4-216ENST00000511859 DNAJC25-GNG10A0A024R161 153 aa13.99□□□□□ -0.17
RNF4-216ENST00000511859 SURF6O75683 361 aaKnown RBP13.99□□□□□ -0.17
RNF4-216ENST00000511859 RABGGTBP53611 331 aa13.99□□□□□ -0.17
RNF4-216ENST00000511859 CCDC144BQ3MJ40 725 aa13.99□□□□□ -0.17
RNF4-216ENST00000511859 SLC43A3Q8NBI5 491 aa13.99□□□□□ -0.17
RNF4-216ENST00000511859 MTCH2Q9Y6C9 303 aa13.99□□□□□ -0.17
RNF4-216ENST00000511859 NAV1Q8NEY1 1877 aa13.99□□□□□ -0.17
RNF4-216ENST00000511859 IPO8O15397 1037 aaKnown RBP13.98□□□□□ -0.17
RNF4-216ENST00000511859 CABYRO75952 493 aa13.98□□□□□ -0.17
RNF4-216ENST00000511859 REPS2Q8NFH8 660 aa13.98□□□□□ -0.17
RNF4-216ENST00000511859 SSH3Q8TE77 659 aa13.98□□□□□ -0.17
RNF4-216ENST00000511859 TEX13BQ9BXU2 312 aa13.98□□□□□ -0.17
RNF4-216ENST00000511859 CCDC8Q9H0W5 538 aaPredicted RBP13.98□□□□□ -0.17
RNF4-216ENST00000511859 ANTXR1Q9H6X2 564 aa13.98□□□□□ -0.17
RNF4-216ENST00000511859 KANSL2Q9H9L4 492 aa13.98□□□□□ -0.17
RNF4-216ENST00000511859 GOPCQ9HD26 462 aa13.98□□□□□ -0.17
RNF4-216ENST00000511859 DCP1AQ9NPI6 582 aaPredicted RBP13.98□□□□□ -0.17
RNF4-216ENST00000511859 FBXO28Q9NVF7 368 aa13.98□□□□□ -0.17
RNF4-216ENST00000511859 AKR1B1P15121 316 aa13.97□□□□□ -0.17
RNF4-216ENST00000511859 ATP2A2P16615 1042 aaKnown RBP13.97□□□□□ -0.17
RNF4-216ENST00000511859 RARSP54136 660 aaKnown RBP13.97□□□□□ -0.17
RNF4-216ENST00000511859 IRX5P78411 483 aaPredicted RBP13.97□□□□□ -0.17
RNF4-216ENST00000511859 ATP8B2P98198 1209 aa13.97□□□□□ -0.17
RNF4-216ENST00000511859 EVX2Q03828 476 aa13.97□□□□□ -0.17
RNF4-216ENST00000511859 TTF1Q15361 905 aaPredicted RBP13.97□□□□□ -0.17
RNF4-216ENST00000511859 TMEM67Q5HYA8 995 aa13.97□□□□□ -0.17
RNF4-216ENST00000511859 ALYREFQ86V81 257 aaKnown RBP13.97□□□□□ -0.17
RNF4-216ENST00000511859 HLA-CQ95604 372 aa13.97□□□□□ -0.17
RNF4-216ENST00000511859 EAF2Q96CJ1 260 aaPredicted RBP13.97□□□□□ -0.17
RNF4-216ENST00000511859 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.97□□□□□ -0.17
RNF4-216ENST00000511859 NOP58Q9Y2X3 529 aaKnown RBP13.97□□□□□ -0.17
RNF4-216ENST00000511859 PI4K2BG5E9Z4 385 aa13.96□□□□□ -0.17
RNF4-216ENST00000511859 ADCY6O43306 1168 aa13.96□□□□□ -0.17
RNF4-216ENST00000511859 EEF2P13639 858 aaKnown RBP13.96□□□□□ -0.17
RNF4-216ENST00000511859 MYOGP15173 224 aa13.96□□□□□ -0.17
RNF4-216ENST00000511859 CCL23P55773 120 aa13.96□□□□□ -0.17
RNF4-216ENST00000511859 CLEC10AQ8IUN9 316 aa13.96□□□□□ -0.17
RNF4-216ENST00000511859 MIER1Q8N108 512 aa13.96□□□□□ -0.17
RNF4-216ENST00000511859 C11orf16Q9NQ32 467 aa13.96□□□□□ -0.17
RNF4-216ENST00000511859 ZBBXA8MT70 800 aa13.96□□□□□ -0.18
RNF4-216ENST00000511859 ATP2A1O14983 1001 aa13.96□□□□□ -0.18
RNF4-216ENST00000511859 CTAGE5O15320 804 aa13.96□□□□□ -0.18
RNF4-216ENST00000511859 PFKMP08237 780 aa13.96□□□□□ -0.18
RNF4-216ENST00000511859 ITGA7Q13683 1181 aa13.96□□□□□ -0.18
RNF4-216ENST00000511859 SLC9C2Q5TAH2 1124 aa13.96□□□□□ -0.18
RNF4-216ENST00000511859 SNRNP48Q6IEG0 339 aaKnown RBP13.96□□□□□ -0.18
RNF4-216ENST00000511859 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms