RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 ADGRF4Q8IZF3 695 aa17.44■□□□□ 0.38
SCLT1-209ENST00000511426 PIGSQ96S52 555 aa17.44■□□□□ 0.38
SCLT1-209ENST00000511426 VCPKMTQ9H867 229 aa17.44■□□□□ 0.38
SCLT1-209ENST00000511426 JMJD4Q9H9V9 463 aa17.44■□□□□ 0.38
SCLT1-209ENST00000511426 GGA3Q9NZ52 723 aa17.44■□□□□ 0.38
SCLT1-209ENST00000511426 TMEM63CQ9P1W3 806 aa17.44■□□□□ 0.38
SCLT1-209ENST00000511426 ZNF112Q9UJU3 913 aa17.44■□□□□ 0.38
SCLT1-209ENST00000511426 TRIM75PA6NK02 468 aa17.43■□□□□ 0.38
SCLT1-209ENST00000511426 M0R2N6 131 aa17.43■□□□□ 0.38
SCLT1-209ENST00000511426 DDNO94850 711 aaPredicted RBP17.43■□□□□ 0.38
SCLT1-209ENST00000511426 EPS15P42566 896 aa17.43■□□□□ 0.38
SCLT1-209ENST00000511426 JAG1P78504 1218 aa17.43■□□□□ 0.38
SCLT1-209ENST00000511426 CEBPZQ03701 1054 aaKnown RBP17.43■□□□□ 0.38
SCLT1-209ENST00000511426 ORC2Q13416 577 aaPredicted RBP17.43■□□□□ 0.38
SCLT1-209ENST00000511426 PTPAQ15257 358 aa17.43■□□□□ 0.38
SCLT1-209ENST00000511426 MCTP2Q6DN12 878 aa17.43■□□□□ 0.38
SCLT1-209ENST00000511426 MIGA2Q7L4E1 593 aa17.43■□□□□ 0.38
SCLT1-209ENST00000511426 OXER1Q8TDS5 423 aa17.43■□□□□ 0.38
SCLT1-209ENST00000511426 ZC3H15Q8WU90 426 aaKnown RBP17.43■□□□□ 0.38
SCLT1-209ENST00000511426 LPAR1Q92633 364 aa17.43■□□□□ 0.38
SCLT1-209ENST00000511426 UBA5Q9GZZ9 404 aa17.43■□□□□ 0.38
SCLT1-209ENST00000511426 GZF1Q9H116 711 aaPredicted RBP17.43■□□□□ 0.38
SCLT1-209ENST00000511426 GPCPD1Q9NPB8 672 aa17.43■□□□□ 0.38
SCLT1-209ENST00000511426 CCDC73Q6ZRK6 1079 aa17.42■□□□□ 0.38
SCLT1-209ENST00000511426 USP50Q70EL3 339 aaPredicted RBP17.42■□□□□ 0.38
SCLT1-209ENST00000511426 RASGRP2Q7LDG7 609 aa17.42■□□□□ 0.38
SCLT1-209ENST00000511426 KRT25Q7Z3Z0 450 aa17.42■□□□□ 0.38
SCLT1-209ENST00000511426 HOMER1Q86YM7 354 aa17.42■□□□□ 0.38
SCLT1-209ENST00000511426 CDAN1Q8IWY9 1227 aa17.42■□□□□ 0.38
SCLT1-209ENST00000511426 GPKOWQ92917 476 aaPredicted RBP eCLIP17.42■□□□□ 0.38
SCLT1-209ENST00000511426 FTOQ9C0B1 505 aaKnown RBP eCLIP17.42■□□□□ 0.383e-8■□□□□ 9.8
SCLT1-209ENST00000511426 PCDHA7Q9UN72 937 aa17.42■□□□□ 0.38
SCLT1-209ENST00000511426 A0A1W2PRG0 241 aa17.42■□□□□ 0.38
SCLT1-209ENST00000511426 TOB1P50616 345 aaPredicted RBP17.42■□□□□ 0.38
SCLT1-209ENST00000511426 SHROOM1Q2M3G4 852 aaPredicted RBP17.42■□□□□ 0.38
SCLT1-209ENST00000511426 KCTD1Q719H9 257 aa17.42■□□□□ 0.38
SCLT1-209ENST00000511426 FAM160B2Q86V87 743 aa17.42■□□□□ 0.38
SCLT1-209ENST00000511426 MRPS27Q92552 414 aaKnown RBP17.42■□□□□ 0.38
SCLT1-209ENST00000511426 KIAA1683Q9H0B3 1180 aa17.42■□□□□ 0.38
SCLT1-209ENST00000511426 CCDC194A0A1B0GVG4 234 aa17.41■□□□□ 0.38
SCLT1-209ENST00000511426 CUTAO60888 179 aa17.41■□□□□ 0.38
SCLT1-209ENST00000511426 STAT2P52630 851 aa17.41■□□□□ 0.38
SCLT1-209ENST00000511426 GPR162Q16538 588 aa17.41■□□□□ 0.38
SCLT1-209ENST00000511426 TYW1BQ6NUM6 668 aa17.41■□□□□ 0.38
SCLT1-209ENST00000511426 ZNF579Q8NAF0 562 aaKnown RBP17.41■□□□□ 0.38
SCLT1-209ENST00000511426 CHURC1Q8WUH1 139 aa17.41■□□□□ 0.38
SCLT1-209ENST00000511426 AS3MTQ9HBK9 375 aa17.41■□□□□ 0.38
SCLT1-209ENST00000511426 ASTN2O75129 1339 aaPredicted RBP17.4■□□□□ 0.38
SCLT1-209ENST00000511426 SMCO2A6NFE2 343 aa17.4■□□□□ 0.38
SCLT1-209ENST00000511426 CTAGE5O15320 804 aa17.4■□□□□ 0.38
SCLT1-209ENST00000511426 CMA1P23946 247 aa17.4■□□□□ 0.38
SCLT1-209ENST00000511426 HIRAP54198 1017 aaPredicted RBP17.4■□□□□ 0.38
SCLT1-209ENST00000511426 USP14P54578 494 aa17.4■□□□□ 0.38
SCLT1-209ENST00000511426 FAM160A1Q05DH4 1040 aa17.4■□□□□ 0.38
SCLT1-209ENST00000511426 NBPF12Q5TAG4 269 aaPredicted RBP17.4■□□□□ 0.38
SCLT1-209ENST00000511426 SYDE2Q5VT97 1194 aa17.4■□□□□ 0.38
SCLT1-209ENST00000511426 SCYL3Q8IZE3 742 aa17.4■□□□□ 0.38
SCLT1-209ENST00000511426 PIBF1Q8WXW3 757 aa17.4■□□□□ 0.38
SCLT1-209ENST00000511426 DCPSQ96C86 337 aaKnown RBP17.4■□□□□ 0.38
SCLT1-209ENST00000511426 VAT1LQ9HCJ6 419 aa17.4■□□□□ 0.38
SCLT1-209ENST00000511426 FAM237AA0A1B0GTK4 181 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 IQCA1LA6NCM1 817 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 VEGFAP15692 232 aaPredicted RBP17.39■□□□□ 0.37
SCLT1-209ENST00000511426 NOL9Q5SY16 702 aaKnown RBP17.39■□□□□ 0.37
SCLT1-209ENST00000511426 L1TD1Q5T7N2 865 aaKnown RBP17.39■□□□□ 0.37
SCLT1-209ENST00000511426 TTBK2Q6IQ55 1244 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 CCAR1Q8IX12 1150 aaKnown RBP17.39■□□□□ 0.37
SCLT1-209ENST00000511426 KRI1Q8N9T8 703 aaKnown RBP17.39■□□□□ 0.37
SCLT1-209ENST00000511426 FERMT2Q96AC1 680 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 WDR18Q9BV38 432 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 NUP62CLQ9H1M0 184 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 CPVLQ9H3G5 476 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 PNMA2Q9UL42 364 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 FSD2A1L4K1 749 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 GOLGA6L3A6NEY3 463 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 GLTPD2A6NH11 291 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 LAD1O00515 517 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 WDR46O15213 610 aaKnown RBP17.39■□□□□ 0.37
SCLT1-209ENST00000511426 PTPREP23469 700 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 ECE1P42892 770 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 ADCY7P51828 1080 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 MRPL12P52815 198 aaKnown RBP17.39■□□□□ 0.37
SCLT1-209ENST00000511426 TTC38Q5R3I4 469 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 AXDND1Q5T1B0 1012 aaPredicted RBP17.39■□□□□ 0.37
SCLT1-209ENST00000511426 LRSAM1Q6UWE0 723 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 SULF1Q8IWU6 871 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 REXO1Q8N1G1 1221 aaKnown RBP17.39■□□□□ 0.37
SCLT1-209ENST00000511426 AMNQ9BXJ7 453 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 RIC8AQ9NPQ8 531 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 FEM1BQ9UK73 627 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 PCDHA6Q9UN73 950 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 PCDHA8Q9Y5H6 950 aa17.39■□□□□ 0.37
SCLT1-209ENST00000511426 SRPRBQ9Y5M8 271 aaKnown RBP17.39■□□□□ 0.37
SCLT1-209ENST00000511426 ATAD5Q96QE3 1844 aa17.38■□□□□ 0.37
SCLT1-209ENST00000511426 USP17L10C9JJH3 530 aa17.38■□□□□ 0.37
SCLT1-209ENST00000511426 TMEM232C9JQI7 657 aa17.38■□□□□ 0.37
SCLT1-209ENST00000511426 RAD21O60216 631 aa17.38■□□□□ 0.37
SCLT1-209ENST00000511426 CDC37Q16543 378 aaPredicted RBP17.38■□□□□ 0.37
SCLT1-209ENST00000511426 ARL6IP4Q66PJ3 421 aaKnown RBP17.38■□□□□ 0.37
SCLT1-209ENST00000511426 PIK3AP1Q6ZUJ8 805 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms