RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 PSMD2Q13200 908 aa8.38□□□□□ -1.07
GYPB-212ENST00000511198 NETO1Q8TDF5 533 aa8.38□□□□□ -1.07
GYPB-212ENST00000511198 BCL7CQ8WUZ0 217 aaPredicted RBP8.38□□□□□ -1.07
GYPB-212ENST00000511198 PLPPR2Q96GM1 343 aa8.38□□□□□ -1.07
GYPB-212ENST00000511198 HEXIM2Q96MH2 286 aaKnown RBP8.38□□□□□ -1.07
GYPB-212ENST00000511198 FAM161BQ96MY7 647 aa8.38□□□□□ -1.07
GYPB-212ENST00000511198 PRDM10Q9NQV6 1147 aa8.38□□□□□ -1.07
GYPB-212ENST00000511198 PICK1Q9NRD5 415 aa8.38□□□□□ -1.07
GYPB-212ENST00000511198 USP35Q9P2H5 1018 aa8.38□□□□□ -1.07
GYPB-212ENST00000511198 LIG3P49916 1009 aa8.37□□□□□ -1.07
GYPB-212ENST00000511198 OXCT1P55809 520 aa8.37□□□□□ -1.07
GYPB-212ENST00000511198 FSTL1Q12841 308 aa8.37□□□□□ -1.07
GYPB-212ENST00000511198 AGMOQ6ZNB7 445 aa8.37□□□□□ -1.07
GYPB-212ENST00000511198 MKNK2Q9HBH9 465 aa8.37□□□□□ -1.07
GYPB-212ENST00000511198 PDE4DIPQ5VU43 2346 aa8.37□□□□□ -1.07
GYPB-212ENST00000511198 USP31Q70CQ4 1352 aa8.36□□□□□ -1.07
GYPB-212ENST00000511198 CDC42BPGQ6DT37 1551 aa8.36□□□□□ -1.07
GYPB-212ENST00000511198 SEPT6Q14141 434 aa8.36□□□□□ -1.07
GYPB-212ENST00000511198 MAP3K11Q16584 847 aa8.36□□□□□ -1.07
GYPB-212ENST00000511198 CCDC27Q2M243 656 aa8.36□□□□□ -1.07
GYPB-212ENST00000511198 CBLL1Q75N03 491 aa8.36□□□□□ -1.07
GYPB-212ENST00000511198 HDXQ7Z353 690 aa8.36□□□□□ -1.07
GYPB-212ENST00000511198 SPRED2Q7Z698 418 aa8.36□□□□□ -1.07
GYPB-212ENST00000511198 TP53INP2Q8IXH6 220 aa8.36□□□□□ -1.07
GYPB-212ENST00000511198 FLCNQ8NFG4 579 aa8.36□□□□□ -1.07
GYPB-212ENST00000511198 KRTAP9-2Q9BYQ4 174 aa8.36□□□□□ -1.07
GYPB-212ENST00000511198 PLAGL2Q9UPG8 496 aa8.36□□□□□ -1.07
GYPB-212ENST00000511198 SNCAIPQ9Y6H5 919 aa8.36□□□□□ -1.07
GYPB-212ENST00000511198 EEA1Q15075 1411 aa8.36□□□□□ -1.07
GYPB-212ENST00000511198 PRAMEF27A3QJZ7 478 aa8.35□□□□□ -1.07
GYPB-212ENST00000511198 CCDC85CA6NKD9 419 aa8.35□□□□□ -1.07
GYPB-212ENST00000511198 GFRA2O00451 464 aa8.35□□□□□ -1.07
GYPB-212ENST00000511198 POLD1P28340 1107 aa8.35□□□□□ -1.07
GYPB-212ENST00000511198 ST13P50502 369 aaKnown RBP8.35□□□□□ -1.07
GYPB-212ENST00000511198 TAF1CQ15572 869 aaPredicted RBP8.35□□□□□ -1.07
GYPB-212ENST00000511198 CDC37L1Q7L3B6 337 aa8.35□□□□□ -1.07
GYPB-212ENST00000511198 KCT2Q8NC54 265 aa8.35□□□□□ -1.07
GYPB-212ENST00000511198 ZNF507Q8TCN5 953 aa8.35□□□□□ -1.07
GYPB-212ENST00000511198 WNT10AQ9GZT5 417 aa8.35□□□□□ -1.07
GYPB-212ENST00000511198 FBRSQ9HAH7 460 aa8.35□□□□□ -1.07
GYPB-212ENST00000511198 SLC5A6Q9Y289 635 aa8.35□□□□□ -1.07
GYPB-212ENST00000511198 SBNO1A3KN83 1393 aa8.35□□□□□ -1.07
GYPB-212ENST00000511198 DHX57Q6P158 1386 aaKnown RBP8.35□□□□□ -1.07
GYPB-212ENST00000511198 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.34□□□□□ -1.07
GYPB-212ENST00000511198 ERCC3P19447 782 aa8.34□□□□□ -1.07
GYPB-212ENST00000511198 TFE3P19532 575 aaPredicted RBP8.34□□□□□ -1.07
GYPB-212ENST00000511198 BNIP3Q12983 259 aa8.34□□□□□ -1.07
GYPB-212ENST00000511198 SLBPQ14493 270 aaKnown RBP eCLIP8.34□□□□□ -1.07
GYPB-212ENST00000511198 ZNF827Q17R98 1081 aa8.34□□□□□ -1.07
GYPB-212ENST00000511198 WIPI1Q5MNZ9 446 aaPredicted RBP8.34□□□□□ -1.07
GYPB-212ENST00000511198 ZNF574Q6ZN55 896 aaPredicted RBP8.34□□□□□ -1.07
GYPB-212ENST00000511198 ARMCX6Q7L4S7 300 aa8.34□□□□□ -1.07
GYPB-212ENST00000511198 MISP3Q96FF7 219 aa8.34□□□□□ -1.07
GYPB-212ENST00000511198 NOC4LQ9BVI4 516 aaKnown RBP8.34□□□□□ -1.07
GYPB-212ENST00000511198 ARHGEF10O15013 1369 aa8.34□□□□□ -1.07
GYPB-212ENST00000511198 TULP4Q9NRJ4 1543 aa8.34□□□□□ -1.08
GYPB-212ENST00000511198 PHRF1Q9P1Y6 1649 aaKnown RBP8.33□□□□□ -1.08
GYPB-212ENST00000511198 HFM1A2PYH4 1435 aa8.33□□□□□ -1.08
GYPB-212ENST00000511198 LRIG2O94898 1065 aa8.33□□□□□ -1.08
GYPB-212ENST00000511198 EOMESO95936 686 aa8.33□□□□□ -1.08
GYPB-212ENST00000511198 CEACAM5P06731 702 aa8.33□□□□□ -1.08
GYPB-212ENST00000511198 NKG7Q16617 165 aa8.33□□□□□ -1.08
GYPB-212ENST00000511198 IFI16Q16666 785 aaKnown RBP8.33□□□□□ -1.08
GYPB-212ENST00000511198 STK11IPQ8N1F8 1099 aa8.33□□□□□ -1.08
GYPB-212ENST00000511198 AGBL5Q8NDL9 886 aa8.33□□□□□ -1.08
GYPB-212ENST00000511198 NAIPQ13075 1403 aa8.32□□□□□ -1.08
GYPB-212ENST00000511198 PRAG1Q86YV5 1406 aa8.32□□□□□ -1.08
GYPB-212ENST00000511198 IGF2BP3O00425 579 aaKnown RBP eCLIP8.32□□□□□ -1.08
GYPB-212ENST00000511198 SLITRK5O94991 958 aa8.32□□□□□ -1.08
GYPB-212ENST00000511198 CAP2P40123 477 aa8.32□□□□□ -1.08
GYPB-212ENST00000511198 CHRNA2Q15822 529 aa8.32□□□□□ -1.08
GYPB-212ENST00000511198 PMFBP1Q8TBY8 1022 aa8.32□□□□□ -1.08
GYPB-212ENST00000511198 TNKS2Q9H2K2 1166 aa8.32□□□□□ -1.08
GYPB-212ENST00000511198 VAV3Q9UKW4 847 aa8.32□□□□□ -1.08
GYPB-212ENST00000511198 TLR6Q9Y2C9 796 aa8.32□□□□□ -1.08
GYPB-212ENST00000511198 KIF1AQ12756 1690 aa8.32□□□□□ -1.08
GYPB-212ENST00000511198 OVOS2A0A0G2JMS6 1433 aa8.31□□□□□ -1.08
GYPB-212ENST00000511198 OVOS2A0A0J9YW53 1432 aa8.31□□□□□ -1.08
GYPB-212ENST00000511198 OVOS2Q6IE36 1432 aa8.31□□□□□ -1.08
GYPB-212ENST00000511198 SORBS3O60504 671 aa8.31□□□□□ -1.08
GYPB-212ENST00000511198 CD8BP10966 210 aa8.31□□□□□ -1.08
GYPB-212ENST00000511198 RLBP1P12271 317 aa8.31□□□□□ -1.08
GYPB-212ENST00000511198 PRKCQQ04759 706 aa8.31□□□□□ -1.08
GYPB-212ENST00000511198 PHC3Q8NDX5 983 aa8.31□□□□□ -1.08
GYPB-212ENST00000511198 FOXQ1Q9C009 403 aa8.31□□□□□ -1.08
GYPB-212ENST00000511198 MIR1-1HGQ9H1L0 117 aa8.31□□□□□ -1.08
GYPB-212ENST00000511198 PRDM11Q9NQV5 511 aa8.31□□□□□ -1.08
GYPB-212ENST00000511198 GTF2IRD1Q9UHL9 959 aa8.31□□□□□ -1.08
GYPB-212ENST00000511198 PAPPAQ13219 1627 aa8.31□□□□□ -1.08
GYPB-212ENST00000511198 KRTAP9-6A0A140TA67 174 aa8.3□□□□□ -1.08
GYPB-212ENST00000511198 LMNB1P20700 586 aa8.3□□□□□ -1.08
GYPB-212ENST00000511198 GRK4P32298 578 aa8.3□□□□□ -1.08
GYPB-212ENST00000511198 ETF1P62495 437 aaKnown RBP8.3□□□□□ -1.08
GYPB-212ENST00000511198 ARHGAP27Q6ZUM4 889 aa8.3□□□□□ -1.08
GYPB-212ENST00000511198 TCP11L2Q8N4U5 519 aa8.3□□□□□ -1.08
GYPB-212ENST00000511198 CRELD1Q96HD1 420 aa8.3□□□□□ -1.08
GYPB-212ENST00000511198 TACC3Q9Y6A5 838 aa8.3□□□□□ -1.08
GYPB-212ENST00000511198 ATP7BP35670 1465 aa8.3□□□□□ -1.08
GYPB-212ENST00000511198 TOPAZ1Q8N9V7 1692 aa8.3□□□□□ -1.08
GYPB-212ENST00000511198 CNTNAP4Q9C0A0 1308 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms