RNA–Protein interactions for RNA: ENST00000511129.2

SCARB2-205, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-205ENST00000511129 NBPF6Q5VWK0 638 aa6.6□□□□□ -1.35
SCARB2-205ENST00000511129 CYB5RLQ6IPT4 315 aa6.6□□□□□ -1.35
SCARB2-205ENST00000511129 INTS5Q6P9B9 1019 aaKnown RBP6.6□□□□□ -1.35
SCARB2-205ENST00000511129 SMC5Q8IY18 1101 aa6.6□□□□□ -1.35
SCARB2-205ENST00000511129 CCDC144CPQ8IYA2 1237 aa6.6□□□□□ -1.35
SCARB2-205ENST00000511129 TMTC2Q8N394 836 aa6.6□□□□□ -1.35
SCARB2-205ENST00000511129 MFSD4AQ8N468 514 aa6.6□□□□□ -1.35
SCARB2-205ENST00000511129 FAM181AQ8N9Y4 354 aa6.6□□□□□ -1.35
SCARB2-205ENST00000511129 PMFBP1Q8TBY8 1022 aa6.6□□□□□ -1.35
SCARB2-205ENST00000511129 SMARCC1Q92922 1105 aaPredicted RBP6.6□□□□□ -1.35
SCARB2-205ENST00000511129 ZNF512BQ96KM6 892 aaPredicted RBP6.6□□□□□ -1.35
SCARB2-205ENST00000511129 NBPF4Q96M43 638 aa6.6□□□□□ -1.35
SCARB2-205ENST00000511129 ASCC2Q9H1I8 757 aaPredicted RBP6.6□□□□□ -1.35
SCARB2-205ENST00000511129 PCMTD2Q9NV79 361 aa6.6□□□□□ -1.35
SCARB2-205ENST00000511129 TMA7Q9Y2S6 64 aaKnown RBP6.6□□□□□ -1.35
SCARB2-205ENST00000511129 LAS1LQ9Y4W2 734 aaKnown RBP6.6□□□□□ -1.35
SCARB2-205ENST00000511129 LTBP3Q9NS15 1303 aa6.59□□□□□ -1.35
SCARB2-205ENST00000511129 ZCCHC11Q5TAX3 1644 aaKnown RBP6.59□□□□□ -1.35
SCARB2-205ENST00000511129 PRR19A6NJB7 356 aa6.59□□□□□ -1.35
SCARB2-205ENST00000511129 ZEB1P37275 1124 aaPredicted RBP6.59□□□□□ -1.35
SCARB2-205ENST00000511129 NCAPHQ15003 741 aa6.59□□□□□ -1.35
SCARB2-205ENST00000511129 RALBP1Q15311 655 aa6.59□□□□□ -1.35
SCARB2-205ENST00000511129 VHLLQ6RSH7 139 aa6.59□□□□□ -1.35
SCARB2-205ENST00000511129 ZNF662Q6ZS27 426 aa6.59□□□□□ -1.35
SCARB2-205ENST00000511129 C22orf34Q6ZV56 151 aa6.59□□□□□ -1.35
SCARB2-205ENST00000511129 DPH6Q7L8W6 267 aa6.59□□□□□ -1.35
SCARB2-205ENST00000511129 GPATCH11Q8N954 259 aa6.59□□□□□ -1.35
SCARB2-205ENST00000511129 BRINP2Q9C0B6 783 aa6.59□□□□□ -1.35
SCARB2-205ENST00000511129 FBXL21Q9UKT6 434 aa6.59□□□□□ -1.35
SCARB2-205ENST00000511129 PCDHB10Q9UN67 800 aa6.59□□□□□ -1.35
SCARB2-205ENST00000511129 CNTNAP4Q9C0A0 1308 aa6.58□□□□□ -1.36
SCARB2-205ENST00000511129 KLF4O43474 513 aa6.58□□□□□ -1.36
SCARB2-205ENST00000511129 COBLO75128 1261 aa6.58□□□□□ -1.36
SCARB2-205ENST00000511129 CEACAM5P06731 702 aa6.58□□□□□ -1.36
SCARB2-205ENST00000511129 ZNF865P0CJ78 1059 aaPredicted RBP6.58□□□□□ -1.36
SCARB2-205ENST00000511129 SSTR4P31391 388 aa6.58□□□□□ -1.36
SCARB2-205ENST00000511129 OXCT1P55809 520 aa6.58□□□□□ -1.36
SCARB2-205ENST00000511129 RAB33AQ14088 237 aa6.58□□□□□ -1.36
SCARB2-205ENST00000511129 IFI16Q16666 785 aaKnown RBP6.58□□□□□ -1.36
SCARB2-205ENST00000511129 TDRD10Q5VZ19 366 aaKnown RBP6.58□□□□□ -1.36
SCARB2-205ENST00000511129 KIAA1211LQ6NV74 962 aa6.58□□□□□ -1.36
SCARB2-205ENST00000511129 PIWIL2Q8TC59 973 aaKnown RBP6.58□□□□□ -1.36
SCARB2-205ENST00000511129 NETO1Q8TDF5 533 aa6.58□□□□□ -1.36
SCARB2-205ENST00000511129 SGSM3Q96HU1 749 aa6.58□□□□□ -1.36
SCARB2-205ENST00000511129 ST7Q9NRC1 585 aa6.58□□□□□ -1.36
SCARB2-205ENST00000511129 FAM86C1Q9NVL1 165 aa6.58□□□□□ -1.36
SCARB2-205ENST00000511129 TERF2IPQ9NYB0 399 aa6.58□□□□□ -1.36
SCARB2-205ENST00000511129 ABCA8O94911 1581 aa6.57□□□□□ -1.36
SCARB2-205ENST00000511129 TMEM265A0A087WTH1 108 aa6.57□□□□□ -1.36
SCARB2-205ENST00000511129 PRR33A8MZF0 331 aa6.57□□□□□ -1.36
SCARB2-205ENST00000511129 LRRN2O75325 713 aa6.57□□□□□ -1.36
SCARB2-205ENST00000511129 NAT2P11245 290 aa6.57□□□□□ -1.36
SCARB2-205ENST00000511129 CD97P48960 835 aa6.57□□□□□ -1.36
SCARB2-205ENST00000511129 AUHQ13825 339 aaKnown RBP6.57□□□□□ -1.36
SCARB2-205ENST00000511129 TCEAL1Q15170 157 aa6.57□□□□□ -1.36
SCARB2-205ENST00000511129 CLEC16AQ2KHT3 1053 aa6.57□□□□□ -1.36
SCARB2-205ENST00000511129 CDKAL1Q5VV42 579 aa6.57□□□□□ -1.36
SCARB2-205ENST00000511129 HEATR6Q6AI08 1181 aaKnown RBP6.57□□□□□ -1.36
SCARB2-205ENST00000511129 MCTP1Q6DN14 999 aa6.57□□□□□ -1.36
SCARB2-205ENST00000511129 FAM178BQ8IXR5 827 aa6.57□□□□□ -1.36
SCARB2-205ENST00000511129 NME8Q8N427 588 aa6.57□□□□□ -1.36
SCARB2-205ENST00000511129 VWCEQ96DN2 955 aa6.57□□□□□ -1.36
SCARB2-205ENST00000511129 CCDC136Q96JN2 1154 aa6.57□□□□□ -1.36
SCARB2-205ENST00000511129 SIRPGQ9P1W8 387 aa6.57□□□□□ -1.36
SCARB2-205ENST00000511129 ZC3H7BQ9UGR2 993 aaKnown RBP6.57□□□□□ -1.36
SCARB2-205ENST00000511129 PCDHB12Q9Y5F1 795 aa6.57□□□□□ -1.36
SCARB2-205ENST00000511129 CAPN6Q9Y6Q1 641 aa6.57□□□□□ -1.36
SCARB2-205ENST00000511129 LRRIQ1Q96JM4 1722 aa6.56□□□□□ -1.36
SCARB2-205ENST00000511129 COL17A1Q9UMD9 1497 aaPredicted RBP6.56□□□□□ -1.36
SCARB2-205ENST00000511129 C9IYK1 514 aa6.56□□□□□ -1.36
SCARB2-205ENST00000511129 TNK2Q07912 1038 aa6.56□□□□□ -1.36
SCARB2-205ENST00000511129 NBPF9Q3BBW0 867 aa6.56□□□□□ -1.36
SCARB2-205ENST00000511129 NOL9Q5SY16 702 aaKnown RBP6.56□□□□□ -1.36
SCARB2-205ENST00000511129 C6orf15Q6UXA7 325 aaPredicted RBP6.56□□□□□ -1.36
SCARB2-205ENST00000511129 APBB1IPQ7Z5R6 666 aaPredicted RBP6.56□□□□□ -1.36
SCARB2-205ENST00000511129 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
SCARB2-205ENST00000511129 C7orf61Q8IZ16 206 aa6.56□□□□□ -1.36
SCARB2-205ENST00000511129 PLD6Q8N2A8 252 aaKnown RBP6.56□□□□□ -1.36
SCARB2-205ENST00000511129 DTWD2Q8NBA8 298 aa6.56□□□□□ -1.36
SCARB2-205ENST00000511129 TRIT1Q9H3H1 467 aaKnown RBP6.56□□□□□ -1.36
SCARB2-205ENST00000511129 GPATCH2Q9NW75 528 aa6.56□□□□□ -1.36
SCARB2-205ENST00000511129 SNX11Q9Y5W9 270 aa6.56□□□□□ -1.36
SCARB2-205ENST00000511129 UHRF1BP1LA0JNW5 1464 aa6.55□□□□□ -1.36
SCARB2-205ENST00000511129 CCDC194A0A1B0GVG4 234 aa6.55□□□□□ -1.36
SCARB2-205ENST00000511129 HOXA10P31260 410 aaPredicted RBP6.55□□□□□ -1.36
SCARB2-205ENST00000511129 CLCN7P51798 805 aa6.55□□□□□ -1.36
SCARB2-205ENST00000511129 DDR2Q16832 855 aa6.55□□□□□ -1.36
SCARB2-205ENST00000511129 NKPD1Q17RQ9 610 aa6.55□□□□□ -1.36
SCARB2-205ENST00000511129 ANKRD39Q53RE8 183 aa6.55□□□□□ -1.36
SCARB2-205ENST00000511129 AXDND1Q5T1B0 1012 aaPredicted RBP6.55□□□□□ -1.36
SCARB2-205ENST00000511129 ADAT2Q7Z6V5 191 aaKnown RBP6.55□□□□□ -1.36
SCARB2-205ENST00000511129 PPFIBP1Q86W92 1011 aa6.55□□□□□ -1.36
SCARB2-205ENST00000511129 Q96M66 194 aa6.55□□□□□ -1.36
SCARB2-205ENST00000511129 GBP3Q9H0R5 595 aa6.55□□□□□ -1.36
SCARB2-205ENST00000511129 TSPOAP1O95153 1857 aa6.55□□□□□ -1.36
SCARB2-205ENST00000511129 KDM5BQ9UGL1 1544 aa6.55□□□□□ -1.36
SCARB2-205ENST00000511129 MAP3K4Q9Y6R4 1608 aa6.54□□□□□ -1.36
SCARB2-205ENST00000511129 MED26O95402 600 aa6.54□□□□□ -1.36
SCARB2-205ENST00000511129 GJB6O95452 261 aa6.54□□□□□ -1.36
SCARB2-205ENST00000511129 EGFLAMQ63HQ2 1017 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms