RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 USP6NLQ92738 828 aa16.44■□□□□ 0.22
DDX41-212ENST00000511040 TTC14Q96N46 770 aa16.44■□□□□ 0.22
DDX41-212ENST00000511040 ZSCAN10Q96SZ4 725 aaPredicted RBP16.44■□□□□ 0.22
DDX41-212ENST00000511040 UNC93B1Q9H1C4 597 aa16.44■□□□□ 0.22
DDX41-212ENST00000511040 GPCPD1Q9NPB8 672 aa16.44■□□□□ 0.22
DDX41-212ENST00000511040 ZNF214Q9UL59 606 aaPredicted RBP16.44■□□□□ 0.22
DDX41-212ENST00000511040 CENPFP49454 3210 aa16.44■□□□□ 0.22
DDX41-212ENST00000511040 ZBED4O75132 1171 aa16.43■□□□□ 0.22
DDX41-212ENST00000511040 EN2P19622 333 aaPredicted RBP16.43■□□□□ 0.22
DDX41-212ENST00000511040 SLC16A2P36021 539 aa16.43■□□□□ 0.22
DDX41-212ENST00000511040 STAT2P52630 851 aa16.43■□□□□ 0.22
DDX41-212ENST00000511040 UBXN2AP68543 259 aa16.43■□□□□ 0.22
DDX41-212ENST00000511040 MAP2K5Q13163 448 aa16.43■□□□□ 0.22
DDX41-212ENST00000511040 GRB14Q14449 540 aa16.43■□□□□ 0.22
DDX41-212ENST00000511040 SNRNP48Q6IEG0 339 aaKnown RBP16.43■□□□□ 0.22
DDX41-212ENST00000511040 CASC1Q6TDU7 716 aa16.43■□□□□ 0.22
DDX41-212ENST00000511040 RIOX2Q8IUF8 465 aa16.43■□□□□ 0.22
DDX41-212ENST00000511040 ENAHQ8N8S7 591 aaPredicted RBP16.43■□□□□ 0.22
DDX41-212ENST00000511040 TRIB2Q92519 343 aa16.43■□□□□ 0.22
DDX41-212ENST00000511040 UBAC1Q9BSL1 405 aa16.43■□□□□ 0.22
DDX41-212ENST00000511040 MROH8Q9H579 483 aa16.43■□□□□ 0.22
DDX41-212ENST00000511040 RAVER2Q9HCJ3 691 aaKnown RBP16.43■□□□□ 0.22
DDX41-212ENST00000511040 TNKSO95271 1327 aa16.43■□□□□ 0.22
DDX41-212ENST00000511040 E7EWF7 191 aa16.42■□□□□ 0.22
DDX41-212ENST00000511040 ZKSCAN1P17029 563 aaPredicted RBP16.42■□□□□ 0.22
DDX41-212ENST00000511040 ADORA2AP29274 412 aa16.42■□□□□ 0.22
DDX41-212ENST00000511040 TRDNQ13061 729 aa16.42■□□□□ 0.22
DDX41-212ENST00000511040 FAM160B2Q86V87 743 aa16.42■□□□□ 0.22
DDX41-212ENST00000511040 DGKHQ86XP1 1220 aa16.42■□□□□ 0.22
DDX41-212ENST00000511040 NPLOC4Q8TAT6 608 aa16.42■□□□□ 0.22
DDX41-212ENST00000511040 CHURC1Q8WUH1 139 aa16.42■□□□□ 0.22
DDX41-212ENST00000511040 APBA2Q99767 749 aa16.42■□□□□ 0.22
DDX41-212ENST00000511040 TEX13BQ9BXU2 312 aa16.42■□□□□ 0.22
DDX41-212ENST00000511040 RNF208Q9H0X6 261 aa16.42■□□□□ 0.22
DDX41-212ENST00000511040 SLC38A10Q9HBR0 1119 aa16.42■□□□□ 0.22
DDX41-212ENST00000511040 RIPK3Q9Y572 518 aa16.42■□□□□ 0.22
DDX41-212ENST00000511040 SLC27A2O14975 620 aa16.41■□□□□ 0.22
DDX41-212ENST00000511040 COBLO75128 1261 aa16.41■□□□□ 0.22
DDX41-212ENST00000511040 SLC25A27O95847 323 aa16.41■□□□□ 0.22
DDX41-212ENST00000511040 HMGCRP04035 888 aa16.41■□□□□ 0.22
DDX41-212ENST00000511040 PDHBP11177 359 aa16.41■□□□□ 0.22
DDX41-212ENST00000511040 XRCC5P13010 732 aaKnown RBP16.41■□□□□ 0.22
DDX41-212ENST00000511040 RGS19P49795 217 aa16.41■□□□□ 0.22
DDX41-212ENST00000511040 CCDC178Q5BJE1 867 aa16.41■□□□□ 0.22
DDX41-212ENST00000511040 CCDC174Q6PII3 467 aa16.41■□□□□ 0.22
DDX41-212ENST00000511040 CHST3Q7LGC8 479 aa16.41■□□□□ 0.22
DDX41-212ENST00000511040 RALYLQ86SE5 291 aaKnown RBP16.41■□□□□ 0.22
DDX41-212ENST00000511040 DPP9Q86TI2 863 aa16.41■□□□□ 0.22
DDX41-212ENST00000511040 MMP19Q99542 508 aa16.41■□□□□ 0.22
DDX41-212ENST00000511040 KAT14Q9H8E8 782 aa16.41■□□□□ 0.22
DDX41-212ENST00000511040 FLRT1Q9NZU1 646 aa16.41■□□□□ 0.22
DDX41-212ENST00000511040 PCDH10Q9P2E7 1040 aa16.41■□□□□ 0.22
DDX41-212ENST00000511040 PRR12Q9ULL5 1215 aa16.41■□□□□ 0.22
DDX41-212ENST00000511040 GOLGA8HP0CJ92 632 aa16.4■□□□□ 0.22
DDX41-212ENST00000511040 FCER1AP12319 257 aa16.4■□□□□ 0.22
DDX41-212ENST00000511040 TAL1P17542 331 aaPredicted RBP16.4■□□□□ 0.22
DDX41-212ENST00000511040 NT5C2P49902 561 aa16.4■□□□□ 0.22
DDX41-212ENST00000511040 CREB3L3Q68CJ9 461 aa16.4■□□□□ 0.22
DDX41-212ENST00000511040 PNMA1Q8ND90 353 aa16.4■□□□□ 0.22
DDX41-212ENST00000511040 NCOA7Q8NI08 942 aa16.4■□□□□ 0.22
DDX41-212ENST00000511040 ANKS1AQ92625 1134 aa16.4■□□□□ 0.22
DDX41-212ENST00000511040 HOMER2Q9NSB8 354 aa16.4■□□□□ 0.22
DDX41-212ENST00000511040 KIAA0100Q14667 2235 aaKnown RBP16.39■□□□□ 0.22
DDX41-212ENST00000511040 STRNO43815 780 aa16.39■□□□□ 0.21
DDX41-212ENST00000511040 PLA2G6O60733 806 aa16.39■□□□□ 0.21
DDX41-212ENST00000511040 PGK2P07205 417 aa16.39■□□□□ 0.21
DDX41-212ENST00000511040 PRKAR2AP13861 404 aaKnown RBP16.39■□□□□ 0.21
DDX41-212ENST00000511040 ZNF543Q08ER8 600 aa16.39■□□□□ 0.21
DDX41-212ENST00000511040 SEC23AQ15436 765 aa16.39■□□□□ 0.21
DDX41-212ENST00000511040 IFIT1BQ5T764 474 aaKnown RBP16.39■□□□□ 0.21
DDX41-212ENST00000511040 SYDE2Q5VT97 1194 aa16.39■□□□□ 0.21
DDX41-212ENST00000511040 AGBL1Q96MI9 1066 aa16.39■□□□□ 0.21
DDX41-212ENST00000511040 CPVLQ9H3G5 476 aa16.39■□□□□ 0.21
DDX41-212ENST00000511040 SENP2Q9HC62 589 aa16.39■□□□□ 0.21
DDX41-212ENST00000511040 IFIT3O14879 490 aaKnown RBP16.38■□□□□ 0.21
DDX41-212ENST00000511040 ATP2A1O14983 1001 aa16.38■□□□□ 0.21
DDX41-212ENST00000511040 SNHG28P0DPA3 235 aa16.38■□□□□ 0.21
DDX41-212ENST00000511040 COPB2P35606 906 aa16.38■□□□□ 0.21
DDX41-212ENST00000511040 MLLT1Q03111 559 aaPredicted RBP16.38■□□□□ 0.21
DDX41-212ENST00000511040 COL9A3Q14050 684 aaPredicted RBP16.38■□□□□ 0.21
DDX41-212ENST00000511040 KCTD2Q14681 263 aa16.38■□□□□ 0.21
DDX41-212ENST00000511040 NECTIN1Q15223 517 aa16.38■□□□□ 0.21
DDX41-212ENST00000511040 TRMT44Q8IYL2 757 aaKnown RBP16.38■□□□□ 0.21
DDX41-212ENST00000511040 DEFB118Q96PH6 123 aa16.38■□□□□ 0.21
DDX41-212ENST00000511040 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.38■□□□□ 0.21
DDX41-212ENST00000511040 ZNF536O15090 1300 aa16.38■□□□□ 0.21
DDX41-212ENST00000511040 RBBP6Q7Z6E9 1792 aaKnown RBP16.38■□□□□ 0.21
DDX41-212ENST00000511040 GJB1P08034 283 aa16.37■□□□□ 0.21
DDX41-212ENST00000511040 HOXC6P09630 235 aa16.37■□□□□ 0.21
DDX41-212ENST00000511040 CYP2C19P33261 490 aa16.37■□□□□ 0.21
DDX41-212ENST00000511040 OAZ1P54368 228 aa16.37■□□□□ 0.21
DDX41-212ENST00000511040 ANTXR2P58335 489 aa16.37■□□□□ 0.21
DDX41-212ENST00000511040 CACNB2Q08289 660 aaPredicted RBP16.37■□□□□ 0.21
DDX41-212ENST00000511040 BTNL9Q6UXG8 535 aa16.37■□□□□ 0.21
DDX41-212ENST00000511040 MB21D2Q8IYB1 491 aaPredicted RBP16.37■□□□□ 0.21
DDX41-212ENST00000511040 ABRAQ8N0Z2 381 aa16.37■□□□□ 0.21
DDX41-212ENST00000511040 SHISA4Q96DD7 197 aa16.37■□□□□ 0.21
DDX41-212ENST00000511040 UBA5Q9GZZ9 404 aa16.37■□□□□ 0.21
DDX41-212ENST00000511040 GPHNQ9NQX3 736 aaPredicted RBP16.37■□□□□ 0.21
DDX41-212ENST00000511040 ZNF236Q9UL36 1845 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms