RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 DDX20Q9UHI6 824 aaKnown RBP27.22■■□□□ 1.95
SNF8-209ENST00000510558 RANBP6O60518 1105 aaKnown RBP27.21■■□□□ 1.95
SNF8-209ENST00000510558 FGRP09769 529 aa27.21■■□□□ 1.95
SNF8-209ENST00000510558 BMP3P12645 472 aa27.21■■□□□ 1.95
SNF8-209ENST00000510558 IRX6P78412 446 aaPredicted RBP27.21■■□□□ 1.95
SNF8-209ENST00000510558 KCTD2Q14681 263 aa27.21■■□□□ 1.95
SNF8-209ENST00000510558 SNRNP48Q6IEG0 339 aaKnown RBP27.21■■□□□ 1.95
SNF8-209ENST00000510558 MAML3Q96JK9 1138 aa27.21■■□□□ 1.95
SNF8-209ENST00000510558 IL17RBQ9NRM6 502 aa27.21■■□□□ 1.95
SNF8-209ENST00000510558 STX8Q9UNK0 236 aa27.21■■□□□ 1.95
SNF8-209ENST00000510558 COLQQ9Y215 455 aaPredicted RBP27.21■■□□□ 1.95
SNF8-209ENST00000510558 NMT2O60551 498 aa27.2■■□□□ 1.94
SNF8-209ENST00000510558 MSCO60682 206 aa27.2■■□□□ 1.94
SNF8-209ENST00000510558 ZBED4O75132 1171 aa27.2■■□□□ 1.94
SNF8-209ENST00000510558 MFAP1P55081 439 aaKnown RBP27.2■■□□□ 1.94
SNF8-209ENST00000510558 CTDP1Q9Y5B0 961 aaPredicted RBP27.2■■□□□ 1.94
SNF8-209ENST00000510558 ATP2A1O14983 1001 aa27.19■■□□□ 1.94
SNF8-209ENST00000510558 CPXCR1Q8N123 301 aa27.19■■□□□ 1.94
SNF8-209ENST00000510558 GMCL1Q96IK5 515 aa27.19■■□□□ 1.94
SNF8-209ENST00000510558 SLC38A10Q9HBR0 1119 aa27.19■■□□□ 1.94
SNF8-209ENST00000510558 TOMM22Q9NS69 142 aa27.19■■□□□ 1.94
SNF8-209ENST00000510558 ISY1Q9ULR0 285 aaKnown RBP27.19■■□□□ 1.94
SNF8-209ENST00000510558 PFASO15067 1338 aa27.18■■□□□ 1.94
SNF8-209ENST00000510558 LAMA4Q16363 1823 aa27.18■■□□□ 1.94
SNF8-209ENST00000510558 PGK2P07205 417 aa27.18■■□□□ 1.94
SNF8-209ENST00000510558 HAND2P61296 217 aa27.18■■□□□ 1.94
SNF8-209ENST00000510558 DIAPH3Q9NSV4 1193 aa27.18■■□□□ 1.94
SNF8-209ENST00000510558 RIPK3Q9Y572 518 aa27.18■■□□□ 1.94
SNF8-209ENST00000510558 TMEM232C9JQI7 657 aa27.17■■□□□ 1.94
SNF8-209ENST00000510558 SLC1A4P43007 532 aa27.17■■□□□ 1.94
SNF8-209ENST00000510558 STAT2P52630 851 aa27.17■■□□□ 1.94
SNF8-209ENST00000510558 RRP12Q5JTH9 1297 aaKnown RBP27.17■■□□□ 1.94
SNF8-209ENST00000510558 CWC27Q6UX04 472 aaKnown RBP27.17■■□□□ 1.94
SNF8-209ENST00000510558 CHRDL2Q6WN34 429 aa27.17■■□□□ 1.94
SNF8-209ENST00000510558 CHMP4CQ96CF2 233 aa27.17■■□□□ 1.94
SNF8-209ENST00000510558 RAVER2Q9HCJ3 691 aaKnown RBP27.17■■□□□ 1.94
SNF8-209ENST00000510558 HIP1O00291 1037 aa27.16■■□□□ 1.94
SNF8-209ENST00000510558 COL6A1P12109 1028 aa27.16■■□□□ 1.94
SNF8-209ENST00000510558 MCCP23508 829 aa27.16■■□□□ 1.94
SNF8-209ENST00000510558 NOVP48745 357 aa27.16■■□□□ 1.94
SNF8-209ENST00000510558 SLC4A3P48751 1232 aa27.16■■□□□ 1.94
SNF8-209ENST00000510558 ZNF792Q3KQV3 632 aa27.16■■□□□ 1.94
SNF8-209ENST00000510558 DIS3Q9Y2L1 958 aaKnown RBP27.16■■□□□ 1.94
SNF8-209ENST00000510558 PDE4AP27815 886 aa27.15■■□□□ 1.94
SNF8-209ENST00000510558 PRAMEF19Q5SWL8 479 aa27.15■■□□□ 1.94
SNF8-209ENST00000510558 FAM160B2Q86V87 743 aa27.15■■□□□ 1.94
SNF8-209ENST00000510558 C7orf61Q8IZ16 206 aa27.15■■□□□ 1.94
SNF8-209ENST00000510558 CHURC1Q8WUH1 139 aa27.15■■□□□ 1.94
SNF8-209ENST00000510558 SEPT4O43236 478 aa27.14■■□□□ 1.94
SNF8-209ENST00000510558 FDX1P10109 184 aa27.14■■□□□ 1.94
SNF8-209ENST00000510558 OAZ1P54368 228 aa27.14■■□□□ 1.94
SNF8-209ENST00000510558 IKQ13123 557 aaPredicted RBP27.14■■□□□ 1.94
SNF8-209ENST00000510558 STAG1Q8WVM7 1258 aa27.14■■□□□ 1.94
SNF8-209ENST00000510558 SMCHD1A6NHR9 2005 aa27.14■■□□□ 1.93
SNF8-209ENST00000510558 AKNAD1Q5T1N1 836 aa27.13■■□□□ 1.93
SNF8-209ENST00000510558 RCSD1Q6JBY9 416 aa27.13■■□□□ 1.93
SNF8-209ENST00000510558 KCTD1Q719H9 257 aa27.13■■□□□ 1.93
SNF8-209ENST00000510558 RASGRP2Q7LDG7 609 aa27.13■■□□□ 1.93
SNF8-209ENST00000510558 TBC1D10CQ8IV04 446 aa27.13■■□□□ 1.93
SNF8-209ENST00000510558 DDX11Q96FC9 970 aa27.13■■□□□ 1.93
SNF8-209ENST00000510558 TINF2Q9BSI4 451 aa27.13■■□□□ 1.93
SNF8-209ENST00000510558 MTMR7Q9Y216 660 aa27.13■■□□□ 1.93
SNF8-209ENST00000510558 TRIOBPQ9H2D6 2365 aa27.13■■□□□ 1.93
SNF8-209ENST00000510558 PLA2G6O60733 806 aa27.12■■□□□ 1.93
SNF8-209ENST00000510558 PCP11498 1178 aaKnown RBP27.12■■□□□ 1.93
SNF8-209ENST00000510558 ANO1Q5XXA6 986 aa27.12■■□□□ 1.93
SNF8-209ENST00000510558 MFSD6Q6ZSS7 791 aa27.12■■□□□ 1.93
SNF8-209ENST00000510558 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.12■■□□□ 1.93
SNF8-209ENST00000510558 TCP11L1Q9NUJ3 509 aa27.12■■□□□ 1.93
SNF8-209ENST00000510558 NRBP1Q9UHY1 535 aa27.12■■□□□ 1.93
SNF8-209ENST00000510558 CHST13Q8NET6 341 aa27.11■■□□□ 1.93
SNF8-209ENST00000510558 RNF41Q9H4P4 317 aaPredicted RBP27.11■■□□□ 1.93
SNF8-209ENST00000510558 RBM27Q9P2N5 1060 aaKnown RBP27.11■■□□□ 1.93
SNF8-209ENST00000510558 FBXO40Q9UH90 709 aa27.11■■□□□ 1.93
SNF8-209ENST00000510558 DNAJC25-GNG10A0A024R161 153 aa27.1■■□□□ 1.93
SNF8-209ENST00000510558 DNM1LO00429 736 aa27.1■■□□□ 1.93
SNF8-209ENST00000510558 TOP1P11387 765 aaKnown RBP27.1■■□□□ 1.93
SNF8-209ENST00000510558 CCDC96Q2M329 555 aa27.1■■□□□ 1.93
SNF8-209ENST00000510558 DCAF4Q8WV16 495 aa27.1■■□□□ 1.93
SNF8-209ENST00000510558 TMEM47Q9BQJ4 181 aa27.1■■□□□ 1.93
SNF8-209ENST00000510558 ZNF213O14771 459 aa27.09■■□□□ 1.93
SNF8-209ENST00000510558 GSPT1P15170 499 aaKnown RBP27.09■■□□□ 1.93
SNF8-209ENST00000510558 LRRC26Q2I0M4 334 aa27.09■■□□□ 1.93
SNF8-209ENST00000510558 TTC22Q5TAA0 569 aa27.09■■□□□ 1.93
SNF8-209ENST00000510558 ARRDC4Q8NCT1 418 aa27.09■■□□□ 1.93
SNF8-209ENST00000510558 DSCC1Q9BVC3 393 aa27.09■■□□□ 1.93
SNF8-209ENST00000510558 SENP6Q9GZR1 1112 aaPredicted RBP27.09■■□□□ 1.93
SNF8-209ENST00000510558 PRO3102Q9H379 93 aa27.09■■□□□ 1.93
SNF8-209ENST00000510558 HOMER2Q9NSB8 354 aa27.09■■□□□ 1.93
SNF8-209ENST00000510558 ZMYND8Q9ULU4 1186 aaPredicted RBP27.09■■□□□ 1.93
SNF8-209ENST00000510558 MCM3APO60318 1980 aa27.09■■□□□ 1.93
SNF8-209ENST00000510558 ZNF536O15090 1300 aa27.09■■□□□ 1.93
SNF8-209ENST00000510558 GJC2Q5T442 439 aaPredicted RBP27.08■■□□□ 1.93
SNF8-209ENST00000510558 ANKRD35Q8N283 1001 aa27.08■■□□□ 1.93
SNF8-209ENST00000510558 MSL3Q8N5Y2 521 aaKnown RBP27.08■■□□□ 1.93
SNF8-209ENST00000510558 PRR12Q9ULL5 1215 aa27.08■■□□□ 1.93
SNF8-209ENST00000510558 NEDD4P46934 1319 aa27.08■■□□□ 1.93
SNF8-209ENST00000510558 TAL1P17542 331 aaPredicted RBP27.07■■□□□ 1.92
SNF8-209ENST00000510558 FXR1P51114 621 aaKnown RBP eCLIP27.07■■□□□ 1.92
SNF8-209ENST00000510558 ESR2Q92731 530 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms