RNA–Protein interactions for RNA: ENST00000510245.1

CAST-231, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-231ENST00000510245 NOP53Q9NZM5 478 aaKnown RBP10.1□□□□□ -0.79
CAST-231ENST00000510245 KIF7Q2M1P5 1343 aa10.09□□□□□ -0.79
CAST-231ENST00000510245 LAMB4A4D0S4 1761 aa10.09□□□□□ -0.79
CAST-231ENST00000510245 LILRB5O75023 590 aa10.09□□□□□ -0.79
CAST-231ENST00000510245 RGS9O75916 674 aaPredicted RBP10.09□□□□□ -0.79
CAST-231ENST00000510245 HOXA10P31260 410 aaPredicted RBP10.09□□□□□ -0.79
CAST-231ENST00000510245 GPLD1P80108 840 aa10.09□□□□□ -0.79
CAST-231ENST00000510245 PLAURQ03405 335 aa10.09□□□□□ -0.79
CAST-231ENST00000510245 MAP3K12Q12852 859 aa10.09□□□□□ -0.79
CAST-231ENST00000510245 ENOX2Q16206 610 aaKnown RBP10.09□□□□□ -0.79
CAST-231ENST00000510245 TTC39BQ5VTQ0 682 aaPredicted RBP10.09□□□□□ -0.79
CAST-231ENST00000510245 ELMSAN1Q6PJG2 1045 aa10.09□□□□□ -0.79
CAST-231ENST00000510245 DPP8Q6V1X1 898 aaPredicted RBP10.09□□□□□ -0.79
CAST-231ENST00000510245 SHISA4Q96DD7 197 aa10.09□□□□□ -0.79
CAST-231ENST00000510245 TRIM11Q96F44 468 aa10.09□□□□□ -0.79
CAST-231ENST00000510245 LGR6Q9HBX8 967 aa10.09□□□□□ -0.79
CAST-231ENST00000510245 TMEM63CQ9P1W3 806 aa10.09□□□□□ -0.79
CAST-231ENST00000510245 NAGPAQ9UK23 515 aa10.09□□□□□ -0.79
CAST-231ENST00000510245 CENPFP49454 3210 aa10.09□□□□□ -0.79
CAST-231ENST00000510245 ASTN2O75129 1339 aaPredicted RBP10.08□□□□□ -0.8
CAST-231ENST00000510245 KIF20BQ96Q89 1820 aa10.08□□□□□ -0.8
CAST-231ENST00000510245 YDJCA8MPS7 323 aa10.08□□□□□ -0.8
CAST-231ENST00000510245 PSMD14O00487 310 aa10.08□□□□□ -0.8
CAST-231ENST00000510245 A1BGP04217 495 aa10.08□□□□□ -0.8
CAST-231ENST00000510245 RPS12P25398 132 aaKnown RBP10.08□□□□□ -0.8
CAST-231ENST00000510245 COL8A1P27658 744 aa10.08□□□□□ -0.8
CAST-231ENST00000510245 NRLP54845 237 aa10.08□□□□□ -0.8
CAST-231ENST00000510245 SP3Q02447 781 aa10.08□□□□□ -0.8
CAST-231ENST00000510245 ANGEL2Q5VTE6 544 aaKnown RBP10.08□□□□□ -0.8
CAST-231ENST00000510245 C20orf204Q6ZNR8 217 aa10.08□□□□□ -0.8
CAST-231ENST00000510245 ZNF438Q7Z4V0 828 aa10.08□□□□□ -0.8
CAST-231ENST00000510245 SH3TC2Q8TF17 1288 aa10.08□□□□□ -0.8
CAST-231ENST00000510245 ZNF496Q96IT1 587 aaPredicted RBP10.08□□□□□ -0.8
CAST-231ENST00000510245 NSUN5Q96P11 429 aaKnown RBP10.08□□□□□ -0.8
CAST-231ENST00000510245 CRAMP1Q96RY5 1269 aa10.08□□□□□ -0.8
CAST-231ENST00000510245 DUSP9Q99956 384 aaKnown RBP10.08□□□□□ -0.8
CAST-231ENST00000510245 RTFDC1Q9BY42 306 aaPredicted RBP10.08□□□□□ -0.8
CAST-231ENST00000510245 ABCC12Q96J65 1359 aa10.08□□□□□ -0.8
CAST-231ENST00000510245 IRS2Q9Y4H2 1338 aa10.07□□□□□ -0.8
CAST-231ENST00000510245 RIC1Q4ADV7 1423 aa10.07□□□□□ -0.8
CAST-231ENST00000510245 LAMA3Q16787 3333 aa10.07□□□□□ -0.8
CAST-231ENST00000510245 MANSC4A6NHS7 340 aaPredicted RBP10.07□□□□□ -0.8
CAST-231ENST00000510245 J3QW42 95 aa10.07□□□□□ -0.8
CAST-231ENST00000510245 EIF1AYO14602 144 aaKnown RBP10.07□□□□□ -0.8
CAST-231ENST00000510245 RNMTO43148 476 aaKnown RBP10.07□□□□□ -0.8
CAST-231ENST00000510245 TNFRSF21O75509 655 aa10.07□□□□□ -0.8
CAST-231ENST00000510245 EIF2AK2P19525 551 aaKnown RBP10.07□□□□□ -0.8
CAST-231ENST00000510245 NF2P35240 595 aa10.07□□□□□ -0.8
CAST-231ENST00000510245 INHBEP58166 350 aa10.07□□□□□ -0.8
CAST-231ENST00000510245 LRIT3Q3SXY7 679 aa10.07□□□□□ -0.8
CAST-231ENST00000510245 POLKQ9UBT6 870 aa10.07□□□□□ -0.8
CAST-231ENST00000510245 ATP6V0A2Q9Y487 856 aa10.07□□□□□ -0.8
CAST-231ENST00000510245 HEG1Q9ULI3 1381 aa10.06□□□□□ -0.8
CAST-231ENST00000510245 VCANP13611 3396 aa10.06□□□□□ -0.8
CAST-231ENST00000510245 RPLP1P05386 114 aaKnown RBP10.06□□□□□ -0.8
CAST-231ENST00000510245 CRHR2Q13324 411 aa10.06□□□□□ -0.8
CAST-231ENST00000510245 PERM1Q5SV97 790 aa10.06□□□□□ -0.8
CAST-231ENST00000510245 NYXQ9GZU5 481 aa10.06□□□□□ -0.8
CAST-231ENST00000510245 ELP3Q9H9T3 547 aa10.06□□□□□ -0.8
CAST-231ENST00000510245 PARP2Q9UGN5 583 aa10.06□□□□□ -0.8
CAST-231ENST00000510245 SPDYE3A6NKU9 549 aa10.05□□□□□ -0.8
CAST-231ENST00000510245 PRPF40AO75400 957 aaKnown RBP10.05□□□□□ -0.8
CAST-231ENST00000510245 FARP2O94887 1054 aaPredicted RBP10.05□□□□□ -0.8
CAST-231ENST00000510245 GHRHP01286 108 aa10.05□□□□□ -0.8
CAST-231ENST00000510245 BMP8BP34820 402 aa10.05□□□□□ -0.8
CAST-231ENST00000510245 OTUD7BQ6GQQ9 843 aa10.05□□□□□ -0.8
CAST-231ENST00000510245 MAFAQ8NHW3 353 aaPredicted RBP10.05□□□□□ -0.8
CAST-231ENST00000510245 GUCD1Q96NT3 240 aa10.05□□□□□ -0.8
CAST-231ENST00000510245 ABI2Q9NYB9 513 aaPredicted RBP10.05□□□□□ -0.8
CAST-231ENST00000510245 SYNGAP1Q96PV0 1343 aa10.05□□□□□ -0.8
CAST-231ENST00000510245 IGF2BP3O00425 579 aaKnown RBP eCLIP10.04□□□□□ -0.8
CAST-231ENST00000510245 PIP4K2AP48426 406 aaPredicted RBP10.04□□□□□ -0.8
CAST-231ENST00000510245 CAP1Q01518 475 aa10.04□□□□□ -0.8
CAST-231ENST00000510245 ATP2B2Q01814 1243 aa10.04□□□□□ -0.8
CAST-231ENST00000510245 PTPN12Q05209 780 aaKnown RBP10.04□□□□□ -0.8
CAST-231ENST00000510245 PI16Q6UXB8 463 aa10.04□□□□□ -0.8
CAST-231ENST00000510245 ARMC9Q7Z3E5 817 aa10.04□□□□□ -0.8
CAST-231ENST00000510245 UBE2Q1Q7Z7E8 422 aa10.04□□□□□ -0.8
CAST-231ENST00000510245 TDHQ8IZJ6 230 aa10.04□□□□□ -0.8
CAST-231ENST00000510245 GDF15Q99988 308 aa10.04□□□□□ -0.8
CAST-231ENST00000510245 LPIN3Q9BQK8 851 aa10.04□□□□□ -0.8
CAST-231ENST00000510245 SMG9Q9H0W8 520 aaKnown RBP10.04□□□□□ -0.8
CAST-231ENST00000510245 RBSNQ9H1K0 784 aa10.04□□□□□ -0.8
CAST-231ENST00000510245 SPTBN5Q9NRC6 3674 aaKnown RBP10.04□□□□□ -0.8
CAST-231ENST00000510245 CACNA1AO00555 2505 aa10.03□□□□□ -0.8
CAST-231ENST00000510245 POLR3DP05423 398 aaPredicted RBP10.03□□□□□ -0.8
CAST-231ENST00000510245 NID1P14543 1247 aa10.03□□□□□ -0.8
CAST-231ENST00000510245 SOX18P35713 384 aa10.03□□□□□ -0.8
CAST-231ENST00000510245 AFF1P51825 1210 aaKnown RBP10.03□□□□□ -0.8
CAST-231ENST00000510245 COL9A3Q14050 684 aaPredicted RBP10.03□□□□□ -0.8
CAST-231ENST00000510245 PRAMEF18Q5VWM3 479 aa10.03□□□□□ -0.8
CAST-231ENST00000510245 PDE12Q6L8Q7 609 aaKnown RBP10.03□□□□□ -0.8
CAST-231ENST00000510245 ALYREFQ86V81 257 aaKnown RBP10.03□□□□□ -0.8
CAST-231ENST00000510245 OR13H1Q8NG92 308 aa10.03□□□□□ -0.8
CAST-231ENST00000510245 SNX29Q8TEQ0 813 aa10.03□□□□□ -0.8
CAST-231ENST00000510245 TTC28Q96AY4 2481 aa10.03□□□□□ -0.8
CAST-231ENST00000510245 CHRDQ9H2X0 955 aa10.03□□□□□ -0.8
CAST-231ENST00000510245 CNTN3Q9P232 1028 aa10.03□□□□□ -0.8
CAST-231ENST00000510245 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.03□□□□□ -0.8
CAST-231ENST00000510245 FAM229AH3BQW9 127 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms