RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 KLHDC9Q8NEP7 349 aa12.48□□□□□ -0.41
DDX41-211ENST00000510171 SYMPKQ92797 1274 aaKnown RBP12.48□□□□□ -0.41
DDX41-211ENST00000510171 NUP88Q99567 741 aaPredicted RBP12.48□□□□□ -0.41
DDX41-211ENST00000510171 PUS7LQ9H0K6 701 aaKnown RBP12.48□□□□□ -0.41
DDX41-211ENST00000510171 CHMP4BQ9H444 224 aaKnown RBP12.48□□□□□ -0.41
DDX41-211ENST00000510171 NYAP2Q9P242 653 aa12.48□□□□□ -0.41
DDX41-211ENST00000510171 ARPP21Q9UBL0 812 aaPredicted RBP12.48□□□□□ -0.41
DDX41-211ENST00000510171 ZHX1Q9UKY1 873 aaPredicted RBP12.48□□□□□ -0.41
DDX41-211ENST00000510171 COG6Q9Y2V7 657 aa12.48□□□□□ -0.41
DDX41-211ENST00000510171 CTDP1Q9Y5B0 961 aaPredicted RBP12.48□□□□□ -0.41
DDX41-211ENST00000510171 MYO5AQ9Y4I1 1855 aaKnown RBP12.48□□□□□ -0.41
DDX41-211ENST00000510171 ROBO3Q96MS0 1386 aa12.47□□□□□ -0.41
DDX41-211ENST00000510171 ELP1O95163 1332 aa12.47□□□□□ -0.41
DDX41-211ENST00000510171 SYNRGQ9UMZ2 1314 aa12.47□□□□□ -0.41
DDX41-211ENST00000510171 ZNF236Q9UL36 1845 aa12.47□□□□□ -0.41
DDX41-211ENST00000510171 DNAJC25-GNG10A0A024R161 153 aa12.47□□□□□ -0.41
DDX41-211ENST00000510171 DUSP11O75319 330 aaKnown RBP12.47□□□□□ -0.41
DDX41-211ENST00000510171 NDUFB10O96000 172 aa12.47□□□□□ -0.41
DDX41-211ENST00000510171 TIMP1P01033 207 aa12.47□□□□□ -0.41
DDX41-211ENST00000510171 SBK1Q52WX2 424 aa12.47□□□□□ -0.41
DDX41-211ENST00000510171 CCSAPQ6IQ19 270 aaPredicted RBP12.47□□□□□ -0.41
DDX41-211ENST00000510171 ZNF467Q7Z7K2 595 aaPredicted RBP12.47□□□□□ -0.41
DDX41-211ENST00000510171 CPXCR1Q8N123 301 aa12.47□□□□□ -0.41
DDX41-211ENST00000510171 STK11IPQ8N1F8 1099 aa12.47□□□□□ -0.41
DDX41-211ENST00000510171 VTI1AQ96AJ9 217 aa12.47□□□□□ -0.41
DDX41-211ENST00000510171 GLT1D1Q96MS3 346 aa12.47□□□□□ -0.41
DDX41-211ENST00000510171 STRBPQ96SI9 672 aaKnown RBP12.47□□□□□ -0.41
DDX41-211ENST00000510171 SPC25Q9HBM1 224 aa12.47□□□□□ -0.41
DDX41-211ENST00000510171 CLIP2Q9UDT6 1046 aa12.47□□□□□ -0.41
DDX41-211ENST00000510171 RIPK3Q9Y572 518 aa12.47□□□□□ -0.41
DDX41-211ENST00000510171 MINDY4BA8MYZ0 360 aa12.46□□□□□ -0.41
DDX41-211ENST00000510171 ATP2A1O14983 1001 aa12.46□□□□□ -0.41
DDX41-211ENST00000510171 RASA1P20936 1047 aa12.46□□□□□ -0.41
DDX41-211ENST00000510171 DNAJB2P25686 324 aa12.46□□□□□ -0.41
DDX41-211ENST00000510171 ACVR2BQ13705 512 aa12.46□□□□□ -0.41
DDX41-211ENST00000510171 GRIN2CQ14957 1233 aa12.46□□□□□ -0.41
DDX41-211ENST00000510171 GIMAP6Q6P9H5 292 aa12.46□□□□□ -0.41
DDX41-211ENST00000510171 CCDC174Q6PII3 467 aa12.46□□□□□ -0.41
DDX41-211ENST00000510171 ZNF444Q8N0Y2 327 aaPredicted RBP12.46□□□□□ -0.41
DDX41-211ENST00000510171 ANKRD35Q8N283 1001 aa12.46□□□□□ -0.41
DDX41-211ENST00000510171 PCSK9Q8NBP7 692 aaKnown RBP12.46□□□□□ -0.41
DDX41-211ENST00000510171 LRRCC1Q9C099 1032 aa12.46□□□□□ -0.41
DDX41-211ENST00000510171 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.46□□□□□ -0.41
DDX41-211ENST00000510171 MROH7Q68CQ1 1323 aa12.45□□□□□ -0.42
DDX41-211ENST00000510171 GSG1L2A8MUP6 293 aa12.45□□□□□ -0.42
DDX41-211ENST00000510171 ASGR1P07306 291 aa12.45□□□□□ -0.42
DDX41-211ENST00000510171 C6orf222P0C671 652 aaPredicted RBP12.45□□□□□ -0.42
DDX41-211ENST00000510171 CST5P28325 142 aaPredicted RBP12.45□□□□□ -0.42
DDX41-211ENST00000510171 CDK7P50613 346 aa12.45□□□□□ -0.42
DDX41-211ENST00000510171 PPIGQ13427 754 aaKnown RBP eCLIP12.45□□□□□ -0.421e-11■■■□□ 18.6
DDX41-211ENST00000510171 MFSD5Q6N075 450 aa12.45□□□□□ -0.42
DDX41-211ENST00000510171 KIFC2Q96AC6 838 aa12.45□□□□□ -0.42
DDX41-211ENST00000510171 TIFAQ96CG3 184 aa12.45□□□□□ -0.42
DDX41-211ENST00000510171 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.45□□□□□ -0.425e-9■□□□□ 10.8
DDX41-211ENST00000510171 ABHD16BQ9H3Z7 469 aa12.45□□□□□ -0.42
DDX41-211ENST00000510171 ZNF576Q9H609 170 aa12.45□□□□□ -0.42
DDX41-211ENST00000510171 RAVER2Q9HCJ3 691 aaKnown RBP12.45□□□□□ -0.42
DDX41-211ENST00000510171 TBX21Q9UL17 535 aa12.45□□□□□ -0.42
DDX41-211ENST00000510171 MYADML2A6NDP7 307 aa12.44□□□□□ -0.42
DDX41-211ENST00000510171 ARVCFO00192 962 aa12.44□□□□□ -0.42
DDX41-211ENST00000510171 IRX5P78411 483 aaPredicted RBP12.44□□□□□ -0.42
DDX41-211ENST00000510171 CCDC144BQ3MJ40 725 aa12.44□□□□□ -0.42
DDX41-211ENST00000510171 GNASQ5JWF2 1037 aa12.44□□□□□ -0.42
DDX41-211ENST00000510171 TMEM199Q8N511 208 aa12.44□□□□□ -0.42
DDX41-211ENST00000510171 CHST13Q8NET6 341 aa12.44□□□□□ -0.42
DDX41-211ENST00000510171 MKL1Q969V6 931 aa12.44□□□□□ -0.42
DDX41-211ENST00000510171 SLC38A10Q9HBR0 1119 aa12.44□□□□□ -0.42
DDX41-211ENST00000510171 ZNF287Q9HBT7 754 aa12.44□□□□□ -0.42
DDX41-211ENST00000510171 PRDM6Q9NQX0 595 aa12.44□□□□□ -0.42
DDX41-211ENST00000510171 ECHDC1Q9NTX5 307 aa12.44□□□□□ -0.42
DDX41-211ENST00000510171 FBXO40Q9UH90 709 aa12.44□□□□□ -0.42
DDX41-211ENST00000510171 FEM1BQ9UK73 627 aa12.44□□□□□ -0.42
DDX41-211ENST00000510171 CUL9Q8IWT3 2517 aa12.44□□□□□ -0.42
DDX41-211ENST00000510171 FRMPD3Q5JV73 1810 aa12.44□□□□□ -0.42
DDX41-211ENST00000510171 A0A0G2JMZ2 1700 aa12.43□□□□□ -0.42
DDX41-211ENST00000510171 RLFQ13129 1914 aa12.43□□□□□ -0.42
DDX41-211ENST00000510171 IGKV6D-41A0A0C4DH26 115 aa12.43□□□□□ -0.42
DDX41-211ENST00000510171 A0A0U1RQG5 324 aaPredicted RBP12.43□□□□□ -0.42
DDX41-211ENST00000510171 TLR3O15455 904 aaKnown RBP12.43□□□□□ -0.42
DDX41-211ENST00000510171 SMARCA5O60264 1052 aaPredicted RBP12.43□□□□□ -0.42
DDX41-211ENST00000510171 APPP05067 770 aa12.43□□□□□ -0.42
DDX41-211ENST00000510171 OAZ1P54368 228 aa12.43□□□□□ -0.42
DDX41-211ENST00000510171 GJA9P57773 515 aa12.43□□□□□ -0.42
DDX41-211ENST00000510171 TMEM240Q5SV17 173 aa12.43□□□□□ -0.42
DDX41-211ENST00000510171 CCDC129Q6ZRS4 1044 aa12.43□□□□□ -0.42
DDX41-211ENST00000510171 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.43□□□□□ -0.42
DDX41-211ENST00000510171 C16orf59Q7L2K0 433 aa12.43□□□□□ -0.42
DDX41-211ENST00000510171 APPBP2Q92624 585 aa12.43□□□□□ -0.42
DDX41-211ENST00000510171 OSBP2Q969R2 916 aa12.43□□□□□ -0.42
DDX41-211ENST00000510171 UPF3AQ9H1J1 476 aaKnown RBP12.43□□□□□ -0.42
DDX41-211ENST00000510171 MTMR4Q9NYA4 1195 aa12.43□□□□□ -0.42
DDX41-211ENST00000510171 SYNPO2Q9UMS6 1093 aa12.43□□□□□ -0.42
DDX41-211ENST00000510171 NAV1Q8NEY1 1877 aa12.42□□□□□ -0.42
DDX41-211ENST00000510171 LTBP2Q14767 1821 aa12.42□□□□□ -0.42
DDX41-211ENST00000510171 RNF113AO15541 343 aaKnown RBP12.42□□□□□ -0.42
DDX41-211ENST00000510171 PRDM1O75626 825 aa12.42□□□□□ -0.42
DDX41-211ENST00000510171 TTLL1O95922 423 aa12.42□□□□□ -0.42
DDX41-211ENST00000510171 CSF2RAP15509 400 aa12.42□□□□□ -0.42
DDX41-211ENST00000510171 GNAT2P19087 354 aa12.42□□□□□ -0.42
DDX41-211ENST00000510171 TDO2P48775 406 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms