RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 COL4A4P53420 1690 aaPredicted RBP16.69■□□□□ 0.26
HMGCR-208ENST00000509431 LPXNO60711 386 aa16.69■□□□□ 0.26
HMGCR-208ENST00000509431 IGSF3O75054 1194 aa16.69■□□□□ 0.26
HMGCR-208ENST00000509431 GNASQ5JWF2 1037 aa16.69■□□□□ 0.26
HMGCR-208ENST00000509431 HFE2Q6ZVN8 426 aa16.69■□□□□ 0.26
HMGCR-208ENST00000509431 CABYRO75952 493 aa16.68■□□□□ 0.26
HMGCR-208ENST00000509431 FLOT1O75955 427 aa16.68■□□□□ 0.26
HMGCR-208ENST00000509431 ACTN1P12814 892 aa16.68■□□□□ 0.26
HMGCR-208ENST00000509431 PTCRAQ6ISU1 281 aaPredicted RBP16.68■□□□□ 0.26
HMGCR-208ENST00000509431 RIOX2Q8IUF8 465 aa16.68■□□□□ 0.26
HMGCR-208ENST00000509431 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.68■□□□□ 0.26
HMGCR-208ENST00000509431 WNT8AQ9H1J5 351 aa16.68■□□□□ 0.26
HMGCR-208ENST00000509431 ZHX1Q9UKY1 873 aaPredicted RBP16.68■□□□□ 0.26
HMGCR-208ENST00000509431 PTPRCP08575 1304 aa16.68■□□□□ 0.26
HMGCR-208ENST00000509431 GRXCR2A6NFK2 248 aa16.67■□□□□ 0.26
HMGCR-208ENST00000509431 IL9P15248 144 aa16.67■□□□□ 0.26
HMGCR-208ENST00000509431 ARID4AP29374 1257 aaPredicted RBP16.67■□□□□ 0.26
HMGCR-208ENST00000509431 PI16Q6UXB8 463 aa16.67■□□□□ 0.26
HMGCR-208ENST00000509431 MAMDC4Q6UXC1 1216 aa16.67■□□□□ 0.26
HMGCR-208ENST00000509431 ATG4CQ96DT6 458 aa16.67■□□□□ 0.26
HMGCR-208ENST00000509431 UPF3BQ9BZI7 483 aaKnown RBP16.67■□□□□ 0.26
HMGCR-208ENST00000509431 COPRSQ9NQ92 184 aa16.67■□□□□ 0.26
HMGCR-208ENST00000509431 COL11A1P12107 1806 aaPredicted RBP16.66■□□□□ 0.26
HMGCR-208ENST00000509431 PARP14Q460N5 1801 aa16.66■□□□□ 0.26
HMGCR-208ENST00000509431 GFRA3O60609 400 aa16.66■□□□□ 0.26
HMGCR-208ENST00000509431 SNAI1O95863 264 aaPredicted RBP16.66■□□□□ 0.26
HMGCR-208ENST00000509431 KCNA5P22460 613 aa16.66■□□□□ 0.26
HMGCR-208ENST00000509431 NKX3-2P78367 333 aa16.66■□□□□ 0.26
HMGCR-208ENST00000509431 TTLL4Q14679 1199 aa16.66■□□□□ 0.26
HMGCR-208ENST00000509431 TMEM132BQ14DG7 1078 aa16.66■□□□□ 0.26
HMGCR-208ENST00000509431 GORABQ5T7V8 394 aa16.66■□□□□ 0.26
HMGCR-208ENST00000509431 ERMP1Q7Z2K6 904 aa16.66■□□□□ 0.26
HMGCR-208ENST00000509431 TTC6Q86TZ1 520 aa16.66■□□□□ 0.26
HMGCR-208ENST00000509431 CERS3Q8IU89 383 aa16.66■□□□□ 0.26
HMGCR-208ENST00000509431 CFAP54Q96N23 3096 aa16.66■□□□□ 0.26
HMGCR-208ENST00000509431 FAM50BQ9Y247 325 aa16.66■□□□□ 0.26
HMGCR-208ENST00000509431 GUCY1A2P33402 732 aa16.65■□□□□ 0.26
HMGCR-208ENST00000509431 PKN1Q16512 942 aa16.65■□□□□ 0.26
HMGCR-208ENST00000509431 PRSS33Q8NF86 280 aa16.65■□□□□ 0.26
HMGCR-208ENST00000509431 VWCEQ96DN2 955 aa16.65■□□□□ 0.26
HMGCR-208ENST00000509431 AGBL1Q96MI9 1066 aa16.65■□□□□ 0.26
HMGCR-208ENST00000509431 PRKAG3Q9UGI9 489 aa16.65■□□□□ 0.26
HMGCR-208ENST00000509431 PA2G4Q9UQ80 394 aaKnown RBP16.65■□□□□ 0.26
HMGCR-208ENST00000509431 HDAC5Q9UQL6 1122 aa16.65■□□□□ 0.26
HMGCR-208ENST00000509431 SPTBN4Q9H254 2564 aa16.64■□□□□ 0.25
HMGCR-208ENST00000509431 A0A1W2PRG0 241 aa16.64■□□□□ 0.25
HMGCR-208ENST00000509431 UQCRFS1P1P0C7P4 283 aa16.64■□□□□ 0.25
HMGCR-208ENST00000509431 ITGA7Q13683 1181 aa16.64■□□□□ 0.25
HMGCR-208ENST00000509431 ACVR2BQ13705 512 aa16.64■□□□□ 0.25
HMGCR-208ENST00000509431 SEPT2Q15019 361 aa16.64■□□□□ 0.25
HMGCR-208ENST00000509431 ZNF467Q7Z7K2 595 aaPredicted RBP16.64■□□□□ 0.25
HMGCR-208ENST00000509431 HERC6Q8IVU3 1022 aa16.64■□□□□ 0.25
HMGCR-208ENST00000509431 SCLYQ96I15 445 aa16.64■□□□□ 0.25
HMGCR-208ENST00000509431 NEUROD6Q96NK8 337 aa16.64■□□□□ 0.25
HMGCR-208ENST00000509431 ABHD16BQ9H3Z7 469 aa16.64■□□□□ 0.25
HMGCR-208ENST00000509431 PTPRZ1P23471 2315 aaPredicted RBP16.64■□□□□ 0.25
HMGCR-208ENST00000509431 ARHGEF15O94989 841 aa16.63■□□□□ 0.25
HMGCR-208ENST00000509431 UBTFL1P0CB47 393 aaPredicted RBP16.63■□□□□ 0.25
HMGCR-208ENST00000509431 STAT3P40763 770 aa16.63■□□□□ 0.25
HMGCR-208ENST00000509431 MCAMP43121 646 aa16.63■□□□□ 0.25
HMGCR-208ENST00000509431 IRX5P78411 483 aaPredicted RBP16.63■□□□□ 0.25
HMGCR-208ENST00000509431 PRKRIP1Q9H875 184 aaPredicted RBP16.63■□□□□ 0.25
HMGCR-208ENST00000509431 ADAMTS5Q9UNA0 930 aa16.63■□□□□ 0.25
HMGCR-208ENST00000509431 USP34Q70CQ2 3546 aa16.62■□□□□ 0.25
HMGCR-208ENST00000509431 B4GALT4O60513 344 aa16.62■□□□□ 0.25
HMGCR-208ENST00000509431 SHMT1P34896 483 aa16.62■□□□□ 0.25
HMGCR-208ENST00000509431 RFC2P35250 354 aa16.62■□□□□ 0.25
HMGCR-208ENST00000509431 USP5P45974 858 aa16.62■□□□□ 0.25
HMGCR-208ENST00000509431 CCDC144BQ3MJ40 725 aa16.62■□□□□ 0.25
HMGCR-208ENST00000509431 BMP8AQ7Z5Y6 402 aa16.62■□□□□ 0.25
HMGCR-208ENST00000509431 MAGEB6Q8N7X4 407 aa16.62■□□□□ 0.25
HMGCR-208ENST00000509431 GDPD5Q8WTR4 605 aa16.62■□□□□ 0.25
HMGCR-208ENST00000509431 IRF2BPLQ9H1B7 796 aa16.62■□□□□ 0.25
HMGCR-208ENST00000509431 MCM3APO60318 1980 aa16.61■□□□□ 0.25
HMGCR-208ENST00000509431 C19orf67A6NJJ6 358 aa16.61■□□□□ 0.25
HMGCR-208ENST00000509431 WDR46O15213 610 aaKnown RBP16.61■□□□□ 0.25
HMGCR-208ENST00000509431 CTAGE5O15320 804 aa16.61■□□□□ 0.25
HMGCR-208ENST00000509431 ADCY6O43306 1168 aa16.61■□□□□ 0.25
HMGCR-208ENST00000509431 ZEB2O60315 1214 aa16.61■□□□□ 0.25
HMGCR-208ENST00000509431 ZP2Q05996 745 aa16.61■□□□□ 0.25
HMGCR-208ENST00000509431 TFCP2Q12800 502 aa16.61■□□□□ 0.25
HMGCR-208ENST00000509431 ADGRA1Q86SQ6 560 aa16.61■□□□□ 0.25
HMGCR-208ENST00000509431 NEK9Q8TD19 979 aa16.61■□□□□ 0.25
HMGCR-208ENST00000509431 ANKS1AQ92625 1134 aa16.61■□□□□ 0.25
HMGCR-208ENST00000509431 DDX11Q96FC9 970 aa16.61■□□□□ 0.25
HMGCR-208ENST00000509431 TRPV6Q9H1D0 765 aa16.61■□□□□ 0.25
HMGCR-208ENST00000509431 SH2D4AQ9H788 454 aa16.61■□□□□ 0.25
HMGCR-208ENST00000509431 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.61■□□□□ 0.25
HMGCR-208ENST00000509431 TECTAO75443 2155 aa16.6■□□□□ 0.25
HMGCR-208ENST00000509431 SUPT20HL2P0C7V6 817 aa16.6■□□□□ 0.25
HMGCR-208ENST00000509431 CXCL17Q6UXB2 119 aa16.6■□□□□ 0.25
HMGCR-208ENST00000509431 DEFB128Q7Z7B8 93 aa16.6■□□□□ 0.25
HMGCR-208ENST00000509431 SCN5AQ14524 2016 aa16.6■□□□□ 0.25
HMGCR-208ENST00000509431 DNAJC25-GNG10A0A024R161 153 aa16.59■□□□□ 0.25
HMGCR-208ENST00000509431 BAIAP3O94812 1187 aa16.59■□□□□ 0.25
HMGCR-208ENST00000509431 DDX10Q13206 875 aaKnown RBP16.59■□□□□ 0.25
HMGCR-208ENST00000509431 KIAA1755Q5JYT7 1200 aa16.59■□□□□ 0.25
HMGCR-208ENST00000509431 ADHFE1Q8IWW8 467 aa16.59■□□□□ 0.25
HMGCR-208ENST00000509431 MRPL50Q8N5N7 158 aaKnown RBP16.59■□□□□ 0.25
HMGCR-208ENST00000509431 VCPKMTQ9H867 229 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms