RNA–Protein interactions for RNA: ENST00000509317.5

COPS4-207, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-207ENST00000509317 STK11IPQ8N1F8 1099 aa12.33□□□□□ -0.44
COPS4-207ENST00000509317 KLHDC9Q8NEP7 349 aa12.33□□□□□ -0.44
COPS4-207ENST00000509317 REPS2Q8NFH8 660 aa12.33□□□□□ -0.44
COPS4-207ENST00000509317 ASB2Q96Q27 587 aa12.33□□□□□ -0.44
COPS4-207ENST00000509317 CXXC1Q9P0U4 656 aaPredicted RBP12.33□□□□□ -0.44
COPS4-207ENST00000509317 NRBP1Q9UHY1 535 aa12.33□□□□□ -0.44
COPS4-207ENST00000509317 ADAMTS5Q9UNA0 930 aa12.33□□□□□ -0.44
COPS4-207ENST00000509317 CNPY2Q9Y2B0 182 aa12.33□□□□□ -0.44
COPS4-207ENST00000509317 RIPK3Q9Y572 518 aa12.33□□□□□ -0.44
COPS4-207ENST00000509317 IGSF3O75054 1194 aa12.32□□□□□ -0.44
COPS4-207ENST00000509317 CYP2C18P33260 490 aa12.32□□□□□ -0.44
COPS4-207ENST00000509317 MFSD5Q6N075 450 aa12.32□□□□□ -0.44
COPS4-207ENST00000509317 CEP85Q6P2H3 762 aa12.32□□□□□ -0.44
COPS4-207ENST00000509317 VTI1AQ96AJ9 217 aa12.32□□□□□ -0.44
COPS4-207ENST00000509317 TOX2Q96NM4 488 aa12.32□□□□□ -0.44
COPS4-207ENST00000509317 GAS2L1Q99501 681 aaPredicted RBP12.32□□□□□ -0.44
COPS4-207ENST00000509317 NKX2-4Q9H2Z4 354 aa12.32□□□□□ -0.44
COPS4-207ENST00000509317 THEGQ9P2T0 379 aa12.32□□□□□ -0.44
COPS4-207ENST00000509317 PPP1R9AQ9ULJ8 1098 aa12.32□□□□□ -0.44
COPS4-207ENST00000509317 YBX2Q9Y2T7 364 aaKnown RBP12.32□□□□□ -0.44
COPS4-207ENST00000509317 DDX49Q9Y6V7 483 aaKnown RBP12.32□□□□□ -0.44
COPS4-207ENST00000509317 UMODL1Q5DID0 1318 aa12.32□□□□□ -0.44
COPS4-207ENST00000509317 ROBO3Q96MS0 1386 aa12.31□□□□□ -0.44
COPS4-207ENST00000509317 USP17L12C9JPN9 530 aa12.31□□□□□ -0.44
COPS4-207ENST00000509317 USP17L21D6R901 530 aa12.31□□□□□ -0.44
COPS4-207ENST00000509317 ASGR1P07306 291 aa12.31□□□□□ -0.44
COPS4-207ENST00000509317 C6orf222P0C671 652 aaPredicted RBP12.31□□□□□ -0.44
COPS4-207ENST00000509317 RASIP1Q5U651 963 aa12.31□□□□□ -0.44
COPS4-207ENST00000509317 SNRNP48Q6IEG0 339 aaKnown RBP12.31□□□□□ -0.44
COPS4-207ENST00000509317 MICALL1Q8N3F8 863 aa12.31□□□□□ -0.44
COPS4-207ENST00000509317 NUP133Q8WUM0 1156 aa12.31□□□□□ -0.44
COPS4-207ENST00000509317 UHRF1Q96T88 793 aaPredicted RBP12.31□□□□□ -0.44
COPS4-207ENST00000509317 TSEN34Q9BSV6 310 aaKnown RBP12.31□□□□□ -0.44
COPS4-207ENST00000509317 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.31□□□□□ -0.44
COPS4-207ENST00000509317 SH2D4AQ9H788 454 aa12.31□□□□□ -0.44
COPS4-207ENST00000509317 SWAP70Q9UH65 585 aa12.31□□□□□ -0.44
COPS4-207ENST00000509317 FAM184BQ9ULE4 1060 aa12.31□□□□□ -0.44
COPS4-207ENST00000509317 COL11A1P12107 1806 aaPredicted RBP12.3□□□□□ -0.44
COPS4-207ENST00000509317 MYOGP15173 224 aa12.3□□□□□ -0.44
COPS4-207ENST00000509317 CDK7P50613 346 aa12.3□□□□□ -0.44
COPS4-207ENST00000509317 RABGGTBP53611 331 aa12.3□□□□□ -0.44
COPS4-207ENST00000509317 BEX3Q00994 111 aa12.3□□□□□ -0.44
COPS4-207ENST00000509317 TFF2Q03403 129 aa12.3□□□□□ -0.44
COPS4-207ENST00000509317 PPIGQ13427 754 aaKnown RBP eCLIP12.3□□□□□ -0.44
COPS4-207ENST00000509317 C12orf60Q5U649 245 aa12.3□□□□□ -0.44
COPS4-207ENST00000509317 CPXCR1Q8N123 301 aa12.3□□□□□ -0.44
COPS4-207ENST00000509317 ATXN2LQ8WWM7 1075 aaKnown RBP12.3□□□□□ -0.44
COPS4-207ENST00000509317 FGD4Q96M96 766 aa12.3□□□□□ -0.44
COPS4-207ENST00000509317 DIS3Q9Y2L1 958 aaKnown RBP12.3□□□□□ -0.44
COPS4-207ENST00000509317 MOXD2PA6NHM9 499 aa12.29□□□□□ -0.44
COPS4-207ENST00000509317 RBAK-RBAKDNI3L0D1 243 aa12.29□□□□□ -0.44
COPS4-207ENST00000509317 CTAGE5O15320 804 aa12.29□□□□□ -0.44
COPS4-207ENST00000509317 MRPS5P82675 430 aaKnown RBP12.29□□□□□ -0.44
COPS4-207ENST00000509317 ACVR2BQ13705 512 aa12.29□□□□□ -0.44
COPS4-207ENST00000509317 TTF1Q15361 905 aaPredicted RBP12.29□□□□□ -0.44
COPS4-207ENST00000509317 CCDC144BQ3MJ40 725 aa12.29□□□□□ -0.44
COPS4-207ENST00000509317 AKNAD1Q5T1N1 836 aa12.29□□□□□ -0.44
COPS4-207ENST00000509317 C16orf86Q6ZW13 317 aa12.29□□□□□ -0.44
COPS4-207ENST00000509317 OTOP2Q7RTS6 562 aa12.29□□□□□ -0.44
COPS4-207ENST00000509317 FAM126BQ8IXS8 530 aa12.29□□□□□ -0.44
COPS4-207ENST00000509317 FTSJ3Q8IY81 847 aaKnown RBP12.29□□□□□ -0.44
COPS4-207ENST00000509317 RHPN1Q8TCX5 695 aa12.29□□□□□ -0.44
COPS4-207ENST00000509317 CHMP4CQ96CF2 233 aa12.29□□□□□ -0.44
COPS4-207ENST00000509317 DDX11Q96FC9 970 aa12.29□□□□□ -0.44
COPS4-207ENST00000509317 GLT1D1Q96MS3 346 aa12.29□□□□□ -0.44
COPS4-207ENST00000509317 RAVER2Q9HCJ3 691 aaKnown RBP12.29□□□□□ -0.44
COPS4-207ENST00000509317 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.29□□□□□ -0.44
COPS4-207ENST00000509317 PARP14Q460N5 1801 aa12.29□□□□□ -0.44
COPS4-207ENST00000509317 PLXNA1Q9UIW2 1896 aa12.28□□□□□ -0.44
COPS4-207ENST00000509317 DNAJC25-GNG10A0A024R161 153 aa12.28□□□□□ -0.44
COPS4-207ENST00000509317 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.28□□□□□ -0.44
COPS4-207ENST00000509317 ARVCFO00192 962 aa12.28□□□□□ -0.44
COPS4-207ENST00000509317 DUSP11O75319 330 aaKnown RBP12.28□□□□□ -0.44
COPS4-207ENST00000509317 CCL23P55773 120 aa12.28□□□□□ -0.44
COPS4-207ENST00000509317 GNASQ5JWF2 1037 aa12.28□□□□□ -0.44
COPS4-207ENST00000509317 SLF1Q9BQI6 1058 aa12.28□□□□□ -0.44
COPS4-207ENST00000509317 TEX13BQ9BXU2 312 aa12.28□□□□□ -0.44
COPS4-207ENST00000509317 BOLA2Q9H3K6 86 aa12.28□□□□□ -0.44
COPS4-207ENST00000509317 GOPCQ9HD26 462 aa12.28□□□□□ -0.44
COPS4-207ENST00000509317 ZNFX1Q9P2E3 1918 aaKnown RBP12.28□□□□□ -0.44
COPS4-207ENST00000509317 SYNGAP1Q96PV0 1343 aa12.28□□□□□ -0.44
COPS4-207ENST00000509317 A0A0U1RQG5 324 aaPredicted RBP12.27□□□□□ -0.45
COPS4-207ENST00000509317 RFXAPO00287 272 aa12.27□□□□□ -0.45
COPS4-207ENST00000509317 NDUFB10O96000 172 aa12.27□□□□□ -0.45
COPS4-207ENST00000509317 ADD2P35612 726 aa12.27□□□□□ -0.45
COPS4-207ENST00000509317 PLA2G5P39877 138 aa12.27□□□□□ -0.45
COPS4-207ENST00000509317 KCNQ1P51787 676 aa12.27□□□□□ -0.45
COPS4-207ENST00000509317 CNTN2Q02246 1040 aa12.27□□□□□ -0.45
COPS4-207ENST00000509317 TMEM63BQ5T3F8 832 aa12.27□□□□□ -0.45
COPS4-207ENST00000509317 CTR9Q6PD62 1173 aa12.27□□□□□ -0.45
COPS4-207ENST00000509317 CXCL17Q6UXB2 119 aa12.27□□□□□ -0.45
COPS4-207ENST00000509317 MAMDC4Q6UXC1 1216 aa12.27□□□□□ -0.45
COPS4-207ENST00000509317 TMEM199Q8N511 208 aa12.27□□□□□ -0.45
COPS4-207ENST00000509317 PANK1Q8TE04 598 aa12.27□□□□□ -0.45
COPS4-207ENST00000509317 CCDC17Q96LX7 622 aa12.27□□□□□ -0.45
COPS4-207ENST00000509317 TRPV6Q9H1D0 765 aa12.27□□□□□ -0.45
COPS4-207ENST00000509317 KANSL2Q9H9L4 492 aa12.27□□□□□ -0.45
COPS4-207ENST00000509317 IL23AQ9NPF7 189 aa12.27□□□□□ -0.45
COPS4-207ENST00000509317 HOMER2Q9NSB8 354 aa12.27□□□□□ -0.45
COPS4-207ENST00000509317 ATP8A2Q9NTI2 1148 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms