RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 CPLX3Q8WVH0 158 aa12.39□□□□□ -0.43
SEC31A-228ENST00000509142 SPATA31A6Q5VVP1 1343 aa12.39□□□□□ -0.43
SEC31A-228ENST00000509142 BBOX1O75936 387 aa12.39□□□□□ -0.43
SEC31A-228ENST00000509142 TUBB4AP04350 444 aa12.39□□□□□ -0.43
SEC31A-228ENST00000509142 PNMA6AP0CW24 399 aaPredicted RBP12.39□□□□□ -0.43
SEC31A-228ENST00000509142 CDK8P49336 464 aa12.39□□□□□ -0.43
SEC31A-228ENST00000509142 INF2Q27J81 1249 aa12.39□□□□□ -0.43
SEC31A-228ENST00000509142 CT47A1Q5JQC4 288 aaPredicted RBP12.39□□□□□ -0.43
SEC31A-228ENST00000509142 SEC63Q9UGP8 760 aaKnown RBP12.39□□□□□ -0.43
SEC31A-228ENST00000509142 MAD2L2Q9UI95 211 aa12.39□□□□□ -0.43
SEC31A-228ENST00000509142 CTNND2Q9UQB3 1225 aa12.39□□□□□ -0.43
SEC31A-228ENST00000509142 SASH3O75995 380 aa12.39□□□□□ -0.43
SEC31A-228ENST00000509142 PARP1P09874 1014 aaKnown RBP12.39□□□□□ -0.43
SEC31A-228ENST00000509142 RASA1P20936 1047 aa12.39□□□□□ -0.43
SEC31A-228ENST00000509142 LONP1P36776 959 aaKnown RBP12.39□□□□□ -0.43
SEC31A-228ENST00000509142 ARL6IP4Q66PJ3 421 aaKnown RBP12.39□□□□□ -0.43
SEC31A-228ENST00000509142 SH3RF1Q7Z6J0 888 aa12.39□□□□□ -0.43
SEC31A-228ENST00000509142 BTAF1O14981 1849 aa12.39□□□□□ -0.43
SEC31A-228ENST00000509142 IRS2Q9Y4H2 1338 aa12.39□□□□□ -0.43
SEC31A-228ENST00000509142 G3V3G9 751 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 RIMBP2O15034 1052 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 TPM1P09493 284 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 GYS1P13807 737 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 DCAF8Q5TAQ9 597 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 CCDC12Q8WUD4 166 aaPredicted RBP12.38□□□□□ -0.43
SEC31A-228ENST00000509142 CTAGE1Q96RT6 745 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 LZTS2Q9BRK4 669 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 RTFDC1Q9BY42 306 aaPredicted RBP12.38□□□□□ -0.43
SEC31A-228ENST00000509142 CPVLQ9H3G5 476 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 F8W031 263 aaPredicted RBP12.38□□□□□ -0.43
SEC31A-228ENST00000509142 GTPBP6O43824 516 aaPredicted RBP12.38□□□□□ -0.43
SEC31A-228ENST00000509142 PICALMQ13492 652 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 WWC2Q6AWC2 1192 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 TBC1D22AQ8WUA7 517 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 ANKS1AQ92625 1134 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 RMND1Q9NWS8 449 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 SOWAHDA6NJG2 315 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 ABL1P00519 1130 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 GTF2IP78347 998 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 MAP3K9P80192 1104 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 KARSQ15046 597 aaKnown RBP12.38□□□□□ -0.43
SEC31A-228ENST00000509142 ZNF771Q7L3S4 317 aaPredicted RBP12.38□□□□□ -0.43
SEC31A-228ENST00000509142 PLIN2Q99541 437 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 TCP11L1Q9NUJ3 509 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 CCDC88AQ3V6T2 1871 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 AFF2P51816 1311 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 FAM205AQ6ZU69 1335 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 ZNF831Q5JPB2 1677 aa12.38□□□□□ -0.43
SEC31A-228ENST00000509142 CUL4BQ13620 913 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 GALNT17Q6IS24 598 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 RRP36Q96EU6 259 aaKnown RBP12.37□□□□□ -0.43
SEC31A-228ENST00000509142 MAPK8IP1Q9UQF2 711 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 A0A1B0GUL6 1792 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 GPR75-ASB3A0A0A6YYF3 556 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 A0A1B0GTH6 734 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 TFRCP02786 760 aaKnown RBP12.37□□□□□ -0.43
SEC31A-228ENST00000509142 USP17L2Q6R6M4 530 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 RAD9BQ6WBX8 426 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 C15orf52Q6ZUT6 534 aaKnown RBP12.37□□□□□ -0.43
SEC31A-228ENST00000509142 FCHSD1Q86WN1 690 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 IGSF22Q8N9C0 903 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 AKR1B15C9JRZ8 316 aaPredicted RBP12.37□□□□□ -0.43
SEC31A-228ENST00000509142 PES1O00541 588 aaKnown RBP12.37□□□□□ -0.43
SEC31A-228ENST00000509142 TYW1BQ6NUM6 668 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 TMX4Q9H1E5 349 aaPredicted RBP12.37□□□□□ -0.43
SEC31A-228ENST00000509142 C6orf50Q9HD87 102 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 BARHL2Q9NY43 387 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 PCDHA6Q9UN73 950 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 PCDHA8Q9Y5H6 950 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 RNF225M0QZC1 329 aaPredicted RBP12.37□□□□□ -0.43
SEC31A-228ENST00000509142 N4BP3O15049 544 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 STX10O60499 249 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 PBX1P40424 430 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 LETM2Q2VYF4 491 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 TBC1D16Q8TBP0 767 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 MTRQ99707 1265 aa12.37□□□□□ -0.43
SEC31A-228ENST00000509142 TRPC5Q9UL62 973 aaPredicted RBP12.37□□□□□ -0.43
SEC31A-228ENST00000509142 CYTH3O43739 400 aa12.36□□□□□ -0.43
SEC31A-228ENST00000509142 GNA11P29992 359 aa12.36□□□□□ -0.43
SEC31A-228ENST00000509142 CCT6AP40227 531 aaKnown RBP12.36□□□□□ -0.43
SEC31A-228ENST00000509142 GNG11P61952 73 aa12.36□□□□□ -0.43
SEC31A-228ENST00000509142 IL17AQ16552 155 aa12.36□□□□□ -0.43
SEC31A-228ENST00000509142 NEDD1Q8NHV4 660 aa12.36□□□□□ -0.43
SEC31A-228ENST00000509142 MRFAP1Q9Y605 127 aa12.36□□□□□ -0.43
SEC31A-228ENST00000509142 PALM3A6NDB9 673 aaPredicted RBP12.36□□□□□ -0.43
SEC31A-228ENST00000509142 SMCO2A6NFE2 343 aa12.36□□□□□ -0.43
SEC31A-228ENST00000509142 PPP1R3GB7ZBB8 358 aa12.36□□□□□ -0.43
SEC31A-228ENST00000509142 RPN1P04843 607 aaKnown RBP12.36□□□□□ -0.43
SEC31A-228ENST00000509142 IL1R1P14778 569 aa12.36□□□□□ -0.43
SEC31A-228ENST00000509142 PAK1Q13153 545 aa12.36□□□□□ -0.43
SEC31A-228ENST00000509142 C16orf86Q6ZW13 317 aa12.36□□□□□ -0.43
SEC31A-228ENST00000509142 MNS1Q8NEH6 495 aa12.36□□□□□ -0.43
SEC31A-228ENST00000509142 CERKQ8TCT0 537 aa12.36□□□□□ -0.43
SEC31A-228ENST00000509142 POLLQ9UGP5 575 aa12.36□□□□□ -0.43
SEC31A-228ENST00000509142 FLT1P17948 1338 aa12.36□□□□□ -0.43
SEC31A-228ENST00000509142 GOLGA6L9A6NEM1 432 aa12.36□□□□□ -0.43
SEC31A-228ENST00000509142 E2F4Q16254 413 aa12.36□□□□□ -0.43
SEC31A-228ENST00000509142 CRY2Q49AN0 593 aa12.36□□□□□ -0.43
SEC31A-228ENST00000509142 RSRC2Q7L4I2 434 aaKnown RBP12.36□□□□□ -0.43
SEC31A-228ENST00000509142 UBXN4Q92575 508 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms