RNA–Protein interactions for RNA: ENST00000509128.5

IFT172-217, Transcript of intraflagellar transport 172, humanhuman

TSL 1 (best)

Gene IFT172, Length 1,723 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT172-217ENST00000509128 CCT2P78371 535 aaKnown RBP16.53■□□□□ 0.24
IFT172-217ENST00000509128 RAB11FIP4Q86YS3 637 aa16.53■□□□□ 0.24
IFT172-217ENST00000509128 SMCR8Q8TEV9 937 aaPredicted RBP16.53■□□□□ 0.24
IFT172-217ENST00000509128 GTF3C6Q969F1 213 aa16.53■□□□□ 0.24
IFT172-217ENST00000509128 HPS5Q9UPZ3 1129 aa16.53■□□□□ 0.24
IFT172-217ENST00000509128 SMCHD1A6NHR9 2005 aa16.53■□□□□ 0.24
IFT172-217ENST00000509128 BAZ2BQ9UIF8 2168 aaKnown RBP16.53■□□□□ 0.24
IFT172-217ENST00000509128 FRMPD2Q68DX3 1309 aaPredicted RBP16.52■□□□□ 0.24
IFT172-217ENST00000509128 DHX16O60231 1041 aaKnown RBP16.52■□□□□ 0.24
IFT172-217ENST00000509128 TLR2O60603 784 aa16.52■□□□□ 0.24
IFT172-217ENST00000509128 FLOT1O75955 427 aa16.52■□□□□ 0.24
IFT172-217ENST00000509128 OSBPP22059 807 aa16.52■□□□□ 0.24
IFT172-217ENST00000509128 LBX1P52954 281 aa16.52■□□□□ 0.24
IFT172-217ENST00000509128 HERVK_113P62684 666 aa16.52■□□□□ 0.24
IFT172-217ENST00000509128 PABPC4Q13310 644 aaKnown RBP eCLIP16.52■□□□□ 0.24
IFT172-217ENST00000509128 PPP2R5BQ15173 497 aa16.52■□□□□ 0.24
IFT172-217ENST00000509128 KCTD1Q719H9 257 aa16.52■□□□□ 0.24
IFT172-217ENST00000509128 CCDC144CPQ8IYA2 1237 aa16.52■□□□□ 0.24
IFT172-217ENST00000509128 NECAB1Q8N987 351 aa16.52■□□□□ 0.24
IFT172-217ENST00000509128 CTCFLQ8NI51 663 aaPredicted RBP16.52■□□□□ 0.24
IFT172-217ENST00000509128 IPO9Q96P70 1041 aaKnown RBP16.52■□□□□ 0.24
IFT172-217ENST00000509128 CFHR5Q9BXR6 569 aa16.52■□□□□ 0.24
IFT172-217ENST00000509128 PNMA3Q9UL41 463 aa16.52■□□□□ 0.24
IFT172-217ENST00000509128 CCDC196A0A1B0GTZ2 297 aa16.51■□□□□ 0.23
IFT172-217ENST00000509128 SPDYE16A6NNV3 312 aaPredicted RBP16.51■□□□□ 0.23
IFT172-217ENST00000509128 KIF5BP33176 963 aa16.51■□□□□ 0.23
IFT172-217ENST00000509128 SCRN1Q12765 414 aa16.51■□□□□ 0.23
IFT172-217ENST00000509128 RTN1Q16799 776 aa16.51■□□□□ 0.23
IFT172-217ENST00000509128 CCDC83Q8IWF9 413 aa16.51■□□□□ 0.23
IFT172-217ENST00000509128 ANKRD13CQ8N6S4 541 aa16.51■□□□□ 0.23
IFT172-217ENST00000509128 FANCBQ8NB91 859 aa16.51■□□□□ 0.23
IFT172-217ENST00000509128 MAP3K14Q99558 947 aa16.51■□□□□ 0.23
IFT172-217ENST00000509128 TXNRD2Q9NNW7 524 aa16.51■□□□□ 0.23
IFT172-217ENST00000509128 GPR25O00155 361 aa16.5■□□□□ 0.23
IFT172-217ENST00000509128 CPLX1O14810 134 aa16.5■□□□□ 0.23
IFT172-217ENST00000509128 GOLGA8HP0CJ92 632 aa16.5■□□□□ 0.23
IFT172-217ENST00000509128 PDHBP11177 359 aa16.5■□□□□ 0.23
IFT172-217ENST00000509128 BMP3P12645 472 aa16.5■□□□□ 0.23
IFT172-217ENST00000509128 SLC1A4P43007 532 aa16.5■□□□□ 0.23
IFT172-217ENST00000509128 CAP1Q01518 475 aa16.5■□□□□ 0.23
IFT172-217ENST00000509128 CCDC96Q2M329 555 aa16.5■□□□□ 0.23
IFT172-217ENST00000509128 ATG4CQ96DT6 458 aa16.5■□□□□ 0.23
IFT172-217ENST00000509128 GMCL1Q96IK5 515 aa16.5■□□□□ 0.23
IFT172-217ENST00000509128 RBM28Q9NW13 759 aaKnown RBP16.5■□□□□ 0.23
IFT172-217ENST00000509128 NID2Q14112 1375 aa16.5■□□□□ 0.23
IFT172-217ENST00000509128 TMEM232C9JQI7 657 aa16.5■□□□□ 0.23
IFT172-217ENST00000509128 CUL4AQ13619 759 aa16.5■□□□□ 0.23
IFT172-217ENST00000509128 TTBK2Q6IQ55 1244 aa16.5■□□□□ 0.23
IFT172-217ENST00000509128 CPLX2Q6PUV4 134 aaKnown RBP16.5■□□□□ 0.23
IFT172-217ENST00000509128 C17orf99Q6UX52 265 aa16.5■□□□□ 0.23
IFT172-217ENST00000509128 ZNF296Q8WUU4 475 aaPredicted RBP16.5■□□□□ 0.23
IFT172-217ENST00000509128 PAGR1Q9BTK6 254 aa16.5■□□□□ 0.23
IFT172-217ENST00000509128 NCOA5Q9HCD5 579 aaKnown RBP16.5■□□□□ 0.23
IFT172-217ENST00000509128 GPCPD1Q9NPB8 672 aa16.5■□□□□ 0.23
IFT172-217ENST00000509128 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.5■□□□□ 0.23
IFT172-217ENST00000509128 PARP1P09874 1014 aaKnown RBP16.49■□□□□ 0.23
IFT172-217ENST00000509128 BCRP11274 1271 aa16.49■□□□□ 0.23
IFT172-217ENST00000509128 SLC4A3P48751 1232 aa16.49■□□□□ 0.23
IFT172-217ENST00000509128 CTCFP49711 727 aaPredicted RBP16.49■□□□□ 0.23
IFT172-217ENST00000509128 COG2Q14746 738 aa16.49■□□□□ 0.23
IFT172-217ENST00000509128 INTS4Q96HW7 963 aaKnown RBP16.49■□□□□ 0.23
IFT172-217ENST00000509128 CPVLQ9H3G5 476 aa16.49■□□□□ 0.23
IFT172-217ENST00000509128 RBPJLQ9UBG7 517 aa16.49■□□□□ 0.23
IFT172-217ENST00000509128 CNMDO75829 334 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 CDC27P30260 824 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 DSG3P32926 999 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 ADD1P35611 737 aaKnown RBP16.48■□□□□ 0.23
IFT172-217ENST00000509128 SLC16A2P36021 539 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 GRM4Q14833 912 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 DCAF4Q8WV16 495 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 KIFC2Q96AC6 838 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 ARHGAP39Q9C0H5 1083 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 BTBD7Q9P203 1132 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 PLXNB2O15031 1838 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 CDKL5O76039 1030 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 SNHG28P0DPA3 235 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 GNAQP50148 359 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 SNAP25P60880 206 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 ZNF543Q08ER8 600 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 ST3GAL1Q11201 340 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 IKQ13123 557 aaPredicted RBP16.48■□□□□ 0.23
IFT172-217ENST00000509128 ASPRV1Q53RT3 343 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 GPATCH4Q5T3I0 446 aaKnown RBP16.48■□□□□ 0.23
IFT172-217ENST00000509128 SLF1Q9BQI6 1058 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 LLPHQ9BRT6 129 aaKnown RBP16.48■□□□□ 0.23
IFT172-217ENST00000509128 PPP1R9AQ9ULJ8 1098 aa16.48■□□□□ 0.23
IFT172-217ENST00000509128 CTGFP29279 349 aa16.47■□□□□ 0.23
IFT172-217ENST00000509128 Q3C1V9 767 aa16.47■□□□□ 0.23
IFT172-217ENST00000509128 STAG2Q8N3U4 1231 aa16.47■□□□□ 0.23
IFT172-217ENST00000509128 SPRYD3Q8NCJ5 442 aa16.47■□□□□ 0.23
IFT172-217ENST00000509128 CD99L2Q8TCZ2 262 aa16.47■□□□□ 0.23
IFT172-217ENST00000509128 FAM217BQ9NTX9 383 aaPredicted RBP16.47■□□□□ 0.23
IFT172-217ENST00000509128 MAD2L2Q9UI95 211 aa16.47■□□□□ 0.23
IFT172-217ENST00000509128 FEM1BQ9UK73 627 aa16.47■□□□□ 0.23
IFT172-217ENST00000509128 ZNFX1Q9P2E3 1918 aaKnown RBP16.46■□□□□ 0.23
IFT172-217ENST00000509128 PALM3A6NDB9 673 aaPredicted RBP16.46■□□□□ 0.23
IFT172-217ENST00000509128 FKTNO75072 461 aa16.46■□□□□ 0.23
IFT172-217ENST00000509128 GCLCP48506 637 aaPredicted RBP16.46■□□□□ 0.23
IFT172-217ENST00000509128 STAT2P52630 851 aa16.46■□□□□ 0.23
IFT172-217ENST00000509128 SP3Q02447 781 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms