RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 ZBED9Q6R2W3 1325 aa19.23■□□□□ 0.67
CXCL1-202ENST00000509101 HNRNPUQ00839 825 aaKnown RBP eCLIP19.22■□□□□ 0.67
CXCL1-202ENST00000509101 SNRNP48Q6IEG0 339 aaKnown RBP19.22■□□□□ 0.67
CXCL1-202ENST00000509101 NUP133Q8WUM0 1156 aa19.22■□□□□ 0.67
CXCL1-202ENST00000509101 SYMPKQ92797 1274 aaKnown RBP19.22■□□□□ 0.67
CXCL1-202ENST00000509101 TOX2Q96NM4 488 aa19.22■□□□□ 0.67
CXCL1-202ENST00000509101 SLF1Q9BQI6 1058 aa19.22■□□□□ 0.67
CXCL1-202ENST00000509101 TEX13BQ9BXU2 312 aa19.22■□□□□ 0.67
CXCL1-202ENST00000509101 SYNGAP1Q96PV0 1343 aa19.22■□□□□ 0.67
CXCL1-202ENST00000509101 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.21■□□□□ 0.67
CXCL1-202ENST00000509101 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.21■□□□□ 0.67
CXCL1-202ENST00000509101 MYADML2A6NDP7 307 aa19.21■□□□□ 0.67
CXCL1-202ENST00000509101 MOXD2PA6NHM9 499 aa19.21■□□□□ 0.67
CXCL1-202ENST00000509101 MYO9BQ13459 2157 aa19.21■□□□□ 0.67
CXCL1-202ENST00000509101 KCNA10Q16322 511 aa19.21■□□□□ 0.67
CXCL1-202ENST00000509101 CTR9Q6PD62 1173 aa19.21■□□□□ 0.67
CXCL1-202ENST00000509101 KLHDC9Q8NEP7 349 aa19.21■□□□□ 0.67
CXCL1-202ENST00000509101 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.21■□□□□ 0.67
CXCL1-202ENST00000509101 FAM184BQ9ULE4 1060 aa19.21■□□□□ 0.67
CXCL1-202ENST00000509101 LRRC37A2A6NM11 1700 aa19.2■□□□□ 0.66
CXCL1-202ENST00000509101 HMMRO75330 724 aa19.2■□□□□ 0.66
CXCL1-202ENST00000509101 SNAI1O95863 264 aaPredicted RBP19.2■□□□□ 0.66
CXCL1-202ENST00000509101 TIMP1P01033 207 aa19.2■□□□□ 0.66
CXCL1-202ENST00000509101 ATP5JP18859 108 aa19.2■□□□□ 0.66
CXCL1-202ENST00000509101 SLC4A3P48751 1232 aa19.2■□□□□ 0.66
CXCL1-202ENST00000509101 IRX5P78411 483 aaPredicted RBP19.2■□□□□ 0.66
CXCL1-202ENST00000509101 MSL3Q8N5Y2 521 aaKnown RBP19.2■□□□□ 0.66
CXCL1-202ENST00000509101 TIFAQ96CG3 184 aa19.2■□□□□ 0.66
CXCL1-202ENST00000509101 DDX11Q96FC9 970 aa19.2■□□□□ 0.66
CXCL1-202ENST00000509101 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.2■□□□□ 0.66
CXCL1-202ENST00000509101 ZNF576Q9H609 170 aa19.2■□□□□ 0.66
CXCL1-202ENST00000509101 TBX21Q9UL17 535 aa19.2■□□□□ 0.66
CXCL1-202ENST00000509101 CHD9Q3L8U1 2897 aa19.19■□□□□ 0.66
CXCL1-202ENST00000509101 C6orf222P0C671 652 aaPredicted RBP19.19■□□□□ 0.66
CXCL1-202ENST00000509101 UBE3CQ15386 1083 aa19.19■□□□□ 0.66
CXCL1-202ENST00000509101 CCSAPQ6IQ19 270 aaPredicted RBP19.19■□□□□ 0.66
CXCL1-202ENST00000509101 SIRT2Q8IXJ6 389 aa19.19■□□□□ 0.66
CXCL1-202ENST00000509101 STK11IPQ8N1F8 1099 aa19.19■□□□□ 0.66
CXCL1-202ENST00000509101 HAUS7Q99871 368 aa19.19■□□□□ 0.66
CXCL1-202ENST00000509101 ARPP21Q9UBL0 812 aaPredicted RBP19.19■□□□□ 0.66
CXCL1-202ENST00000509101 RIPK3Q9Y572 518 aa19.19■□□□□ 0.66
CXCL1-202ENST00000509101 MROH7Q68CQ1 1323 aa19.19■□□□□ 0.66
CXCL1-202ENST00000509101 DNAJC25-GNG10A0A024R161 153 aa19.18■□□□□ 0.66
CXCL1-202ENST00000509101 ADCY6O43306 1168 aa19.18■□□□□ 0.66
CXCL1-202ENST00000509101 DUSP11O75319 330 aaKnown RBP19.18■□□□□ 0.66
CXCL1-202ENST00000509101 PPIGQ13427 754 aaKnown RBP eCLIP19.18■□□□□ 0.66
CXCL1-202ENST00000509101 TJAP1Q5JTD0 557 aa19.18■□□□□ 0.66
CXCL1-202ENST00000509101 MFSD5Q6N075 450 aa19.18■□□□□ 0.66
CXCL1-202ENST00000509101 MAMDC4Q6UXC1 1216 aa19.18■□□□□ 0.66
CXCL1-202ENST00000509101 RPAP2Q8IXW5 612 aaPredicted RBP19.18■□□□□ 0.66
CXCL1-202ENST00000509101 CPXCR1Q8N123 301 aa19.18■□□□□ 0.66
CXCL1-202ENST00000509101 GLT1D1Q96MS3 346 aa19.18■□□□□ 0.66
CXCL1-202ENST00000509101 PUS7LQ9H0K6 701 aaKnown RBP19.18■□□□□ 0.66
CXCL1-202ENST00000509101 GRXCR1A8MXD5 290 aa19.17■□□□□ 0.66
CXCL1-202ENST00000509101 RAB11FIP3O75154 756 aa19.17■□□□□ 0.66
CXCL1-202ENST00000509101 NDUFB10O96000 172 aa19.17■□□□□ 0.66
CXCL1-202ENST00000509101 ASGR1P07306 291 aa19.17■□□□□ 0.66
CXCL1-202ENST00000509101 RASA1P20936 1047 aa19.17■□□□□ 0.66
CXCL1-202ENST00000509101 CST5P28325 142 aaPredicted RBP19.17■□□□□ 0.66
CXCL1-202ENST00000509101 CCDC129Q6ZRS4 1044 aa19.17■□□□□ 0.66
CXCL1-202ENST00000509101 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.17■□□□□ 0.66
CXCL1-202ENST00000509101 CTDP1Q9Y5B0 961 aaPredicted RBP19.17■□□□□ 0.66
CXCL1-202ENST00000509101 ELP1O95163 1332 aa19.17■□□□□ 0.66
CXCL1-202ENST00000509101 F5H6K3 240 aa19.16■□□□□ 0.66
CXCL1-202ENST00000509101 CSF2RAP15509 400 aa19.16■□□□□ 0.66
CXCL1-202ENST00000509101 PBX2P40425 430 aa19.16■□□□□ 0.66
CXCL1-202ENST00000509101 KLRC3Q07444 240 aa19.16■□□□□ 0.66
CXCL1-202ENST00000509101 ACVR2BQ13705 512 aa19.16■□□□□ 0.66
CXCL1-202ENST00000509101 TMEM240Q5SV17 173 aa19.16■□□□□ 0.66
CXCL1-202ENST00000509101 ZSCAN25Q6NSZ9 544 aa19.16■□□□□ 0.66
CXCL1-202ENST00000509101 PCSK9Q8NBP7 692 aaKnown RBP19.16■□□□□ 0.66
CXCL1-202ENST00000509101 PPM1EQ8WY54 764 aa19.16■□□□□ 0.66
CXCL1-202ENST00000509101 VTI1AQ96AJ9 217 aa19.16■□□□□ 0.66
CXCL1-202ENST00000509101 GAS2L1Q99501 681 aaPredicted RBP19.16■□□□□ 0.66
CXCL1-202ENST00000509101 PBX4Q9BYU1 374 aa19.16■□□□□ 0.66
CXCL1-202ENST00000509101 PPP1R12CQ9BZL4 782 aa19.16■□□□□ 0.66
CXCL1-202ENST00000509101 A0A0U1RQG5 324 aaPredicted RBP19.15■□□□□ 0.66
CXCL1-202ENST00000509101 CDK7P50613 346 aa19.15■□□□□ 0.66
CXCL1-202ENST00000509101 CCDC144BQ3MJ40 725 aa19.15■□□□□ 0.66
CXCL1-202ENST00000509101 CCDC174Q6PII3 467 aa19.15■□□□□ 0.66
CXCL1-202ENST00000509101 C16orf59Q7L2K0 433 aa19.15■□□□□ 0.66
CXCL1-202ENST00000509101 ZNF467Q7Z7K2 595 aaPredicted RBP19.15■□□□□ 0.66
CXCL1-202ENST00000509101 ANKRD35Q8N283 1001 aa19.15■□□□□ 0.66
CXCL1-202ENST00000509101 PRPF38AQ8NAV1 312 aaKnown RBP19.15■□□□□ 0.66
CXCL1-202ENST00000509101 KIFC2Q96AC6 838 aa19.15■□□□□ 0.66
CXCL1-202ENST00000509101 FGD4Q96M96 766 aa19.15■□□□□ 0.66
CXCL1-202ENST00000509101 UPF3AQ9H1J1 476 aaKnown RBP19.15■□□□□ 0.66
CXCL1-202ENST00000509101 MKNK2Q9HBH9 465 aa19.15■□□□□ 0.66
CXCL1-202ENST00000509101 SPC25Q9HBM1 224 aa19.15■□□□□ 0.66
CXCL1-202ENST00000509101 RAVER2Q9HCJ3 691 aaKnown RBP19.15■□□□□ 0.66
CXCL1-202ENST00000509101 NYAP2Q9P242 653 aa19.15■□□□□ 0.66
CXCL1-202ENST00000509101 TNFRSF10AO00220 468 aa19.14■□□□□ 0.65
CXCL1-202ENST00000509101 ATP2A1O14983 1001 aa19.14■□□□□ 0.65
CXCL1-202ENST00000509101 ZBED4O75132 1171 aa19.14■□□□□ 0.65
CXCL1-202ENST00000509101 ACRP10323 421 aa19.14■□□□□ 0.65
CXCL1-202ENST00000509101 GJA9P57773 515 aa19.14■□□□□ 0.65
CXCL1-202ENST00000509101 PSRC1Q6PGN9 363 aaPredicted RBP19.14■□□□□ 0.65
CXCL1-202ENST00000509101 ARMCX2Q7L311 632 aa19.14■□□□□ 0.65
CXCL1-202ENST00000509101 ABHD16BQ9H3Z7 469 aa19.14■□□□□ 0.65
CXCL1-202ENST00000509101 PRDM12Q9H4Q4 367 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms