RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 NAV1Q8NEY1 1877 aa12.7□□□□□ -0.38
COPS4-206ENST00000509093 ERICH2A1L162 156 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 CPLX1O14810 134 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 EIF3JO75822 258 aaKnown RBP12.69□□□□□ -0.38
COPS4-206ENST00000509093 RAD17O75943 681 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 SLC3A2P08195 630 aaKnown RBP12.69□□□□□ -0.38
COPS4-206ENST00000509093 NDUFA8P51970 172 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 CACNB3P54284 484 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 GNG11P61952 73 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 PDE4BQ07343 736 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 NFIAQ12857 509 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 NTRK3Q16288 839 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 HHIPL2Q6UWX4 724 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 TMEM139Q8IV31 216 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 VSTM4Q8IW00 320 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 ZNF654Q8IZM8 581 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 CMTR1Q8N1G2 835 aaKnown RBP12.69□□□□□ -0.38
COPS4-206ENST00000509093 LARGE2Q8N3Y3 721 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 NUP133Q8WUM0 1156 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 PHKBQ93100 1093 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 KIFC2Q96AC6 838 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 WDR24Q96S15 920 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 VPS18Q9P253 973 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 ROBO3Q96MS0 1386 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 A0A1B0GVL5 298 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 EIF3CLB5ME19 914 aaKnown RBP12.69□□□□□ -0.38
COPS4-206ENST00000509093 POTEB2H3BUK9 544 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 SLURP2P0DP57 97 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 PCP11498 1178 aaKnown RBP12.69□□□□□ -0.38
COPS4-206ENST00000509093 LMOD1P29536 600 aaPredicted RBP12.69□□□□□ -0.38
COPS4-206ENST00000509093 TFAP4Q01664 338 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 ZFPM1Q8IX07 1006 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 PPM1EQ8WY54 764 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 EIF3CQ99613 913 aaKnown RBP12.69□□□□□ -0.38
COPS4-206ENST00000509093 IL17RBQ9NRM6 502 aa12.69□□□□□ -0.38
COPS4-206ENST00000509093 MYO1BO43795 1136 aa12.68□□□□□ -0.38
COPS4-206ENST00000509093 ATP2B1P20020 1258 aa12.68□□□□□ -0.38
COPS4-206ENST00000509093 MMP14P50281 582 aa12.68□□□□□ -0.38
COPS4-206ENST00000509093 FKBP1AP62942 108 aaKnown RBP12.68□□□□□ -0.38
COPS4-206ENST00000509093 DALRD3Q5D0E6 543 aaKnown RBP12.68□□□□□ -0.38
COPS4-206ENST00000509093 MTA3Q9BTC8 594 aa12.68□□□□□ -0.38
COPS4-206ENST00000509093 PDE11AQ9HCR9 933 aa12.68□□□□□ -0.38
COPS4-206ENST00000509093 DDX60LQ5H9U9 1706 aaKnown RBP12.68□□□□□ -0.38
COPS4-206ENST00000509093 TSPY2A6NKD2 308 aa12.68□□□□□ -0.38
COPS4-206ENST00000509093 ATP1A3P13637 1013 aa12.68□□□□□ -0.38
COPS4-206ENST00000509093 RASA1P20936 1047 aa12.68□□□□□ -0.38
COPS4-206ENST00000509093 CDK8P49336 464 aa12.68□□□□□ -0.38
COPS4-206ENST00000509093 RBM5P52756 815 aaKnown RBP eCLIP12.68□□□□□ -0.38
COPS4-206ENST00000509093 UBASH3AP57075 661 aa12.68□□□□□ -0.38
COPS4-206ENST00000509093 CORO7P57737 925 aa12.68□□□□□ -0.38
COPS4-206ENST00000509093 HDXQ7Z353 690 aa12.68□□□□□ -0.38
COPS4-206ENST00000509093 IQCA1Q86XH1 822 aa12.68□□□□□ -0.38
COPS4-206ENST00000509093 ZDHHC15Q96MV8 337 aa12.68□□□□□ -0.38
COPS4-206ENST00000509093 HSD3B7Q9H2F3 369 aa12.68□□□□□ -0.38
COPS4-206ENST00000509093 MKNK2Q9HBH9 465 aa12.68□□□□□ -0.38
COPS4-206ENST00000509093 PSMD14O00487 310 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 CPP00450 1065 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 TOP1P11387 765 aaKnown RBP12.67□□□□□ -0.38
COPS4-206ENST00000509093 IFIT1BQ5T764 474 aaKnown RBP12.67□□□□□ -0.38
COPS4-206ENST00000509093 RCSD1Q6JBY9 416 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 SYNE3Q6ZMZ3 975 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 AMOTL1Q8IY63 956 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 FAM177A1Q8N128 213 aaPredicted RBP12.67□□□□□ -0.38
COPS4-206ENST00000509093 TMTC2Q8N394 836 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 CCDC82Q8N4S0 544 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 KCNG4Q8TDN1 519 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 DHX58Q96C10 678 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 ZBTB12Q9Y330 459 aaPredicted RBP12.67□□□□□ -0.38
COPS4-206ENST00000509093 BIN1O00499 593 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 ERLIN1O75477 346 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 MYL5Q02045 173 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 RTN1Q16799 776 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 GRIPAP1Q4V328 841 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 BEND6Q5SZJ8 279 aaPredicted RBP12.67□□□□□ -0.38
COPS4-206ENST00000509093 C16orf86Q6ZW13 317 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 SUGP1Q8IWZ8 645 aaKnown RBP12.67□□□□□ -0.38
COPS4-206ENST00000509093 FANCBQ8NB91 859 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 NLGN2Q8NFZ4 835 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 DPF2Q92785 391 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 RAB21Q9UL25 225 aa12.67□□□□□ -0.38
COPS4-206ENST00000509093 YEATS4O95619 227 aa12.66□□□□□ -0.38
COPS4-206ENST00000509093 SERPINC1P01008 464 aa12.66□□□□□ -0.38
COPS4-206ENST00000509093 GUCY1A2P33402 732 aa12.66□□□□□ -0.38
COPS4-206ENST00000509093 CFAP100Q494V2 611 aa12.66□□□□□ -0.38
COPS4-206ENST00000509093 LINC00301Q8NCQ3 95 aa12.66□□□□□ -0.38
COPS4-206ENST00000509093 MSANTD4Q8NCY6 345 aa12.66□□□□□ -0.38
COPS4-206ENST00000509093 CHMP4CQ96CF2 233 aa12.66□□□□□ -0.38
COPS4-206ENST00000509093 BCS1LQ9Y276 419 aa12.66□□□□□ -0.38
COPS4-206ENST00000509093 NID2Q14112 1375 aa12.66□□□□□ -0.38
COPS4-206ENST00000509093 NFKBIEO00221 500 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 IARSP41252 1262 aaKnown RBP12.65□□□□□ -0.38
COPS4-206ENST00000509093 CHMP4BP1P59074 171 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 TCP10Q12799 353 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 TROAPQ12815 778 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 STK38Q15208 465 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 FOXR1Q6PIV2 292 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 SRGAP1Q7Z6B7 1085 aa12.65□□□□□ -0.38
COPS4-206ENST00000509093 ZNF444Q8N0Y2 327 aaPredicted RBP12.65□□□□□ -0.38
COPS4-206ENST00000509093 BAG1Q99933 345 aaPredicted RBP12.65□□□□□ -0.38
COPS4-206ENST00000509093 MRIQ9BWK5 157 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms