RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 TMEM266Q2M3C6 531 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 MINDY4Q4G0A6 757 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 SEPT14Q6ZU15 432 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 KCNH5Q8NCM2 988 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 RNPC3Q96LT9 517 aaKnown RBP4.41□□□□□ -1.7
NEDD4-209ENST00000508871 RUNDC3BQ96NL0 473 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 MAF1Q9H063 256 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 VPS45Q9NRW7 570 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 POLKQ9UBT6 870 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 FNDC3AQ9Y2H6 1198 aaKnown RBP4.41□□□□□ -1.7
NEDD4-209ENST00000508871 ZBED4O75132 1171 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 IDEP14735 1019 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 EPB42P16452 691 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 ETFBP38117 255 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 RENBPP51606 427 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 NMIQ13287 307 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-209ENST00000508871 PTK7Q13308 1070 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 ALDH1L2Q3SY69 923 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 CCDC38Q502W7 563 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 OTUD6BQ8N6M0 293 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 OR2W6PQ8NHA6 318 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 PXYLP1Q8TE99 480 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 UNC45AQ9H3U1 944 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 C6orf203Q9P0P8 240 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-209ENST00000508871 NRAPQ86VF7 1730 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.41□□□□□ -1.7
NEDD4-209ENST00000508871 SNX2O60749 519 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 CPNE3O75131 537 aaKnown RBP4.41□□□□□ -1.7
NEDD4-209ENST00000508871 TMOD1P28289 359 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 MCM2P49736 904 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 MAP3K12Q12852 859 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 E2F5Q15329 346 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 C17orf53Q8N3J3 647 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-209ENST00000508871 RIN3Q8TB24 985 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 TSPAN18Q96SJ8 248 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 IGFLR1Q9H665 355 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 PTPRHQ9HD43 1115 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 APPL1Q9UKG1 709 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 SAMM50Q9Y512 469 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 IBTKQ9P2D0 1353 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-209ENST00000508871 ELL2O00472 640 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-209ENST00000508871 NOP56O00567 594 aaKnown RBP4.41□□□□□ -1.7
NEDD4-209ENST00000508871 ATN1P54259 1190 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-209ENST00000508871 IKQ13123 557 aaPredicted RBP4.41□□□□□ -1.7
NEDD4-209ENST00000508871 PDE3AQ14432 1141 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 PRPF38BQ5VTL8 546 aaKnown RBP4.41□□□□□ -1.7
NEDD4-209ENST00000508871 TPTE2Q6XPS3 522 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 TCP11L2Q8N4U5 519 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 EHD4Q9H223 541 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 PPT2Q9UMR5 302 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 AGTPBP1Q9UPW5 1226 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 KIF3AQ9Y496 699 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 KIAA0232Q92628 1395 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 HARSP12081 509 aaKnown RBP4.41□□□□□ -1.7
NEDD4-209ENST00000508871 NEK2P51955 445 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 TMED1Q13445 227 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 DNAJC21Q5F1R6 531 aaKnown RBP4.41□□□□□ -1.7
NEDD4-209ENST00000508871 CIAPIN1Q6FI81 312 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 C16orf87Q6PH81 154 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 RFX8Q6ZV50 586 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 ZNF438Q7Z4V0 828 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 RAB11FIP4Q86YS3 637 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 AHI1Q8N157 1196 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 OR8H2Q8N162 312 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 GOLM1Q8NBJ4 401 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 CDHR1Q96JP9 859 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 CENPOQ9BU64 300 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 STIM2Q9P246 746 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 TAGLN3Q9UI15 199 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 ANAPC5Q9UJX4 755 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 LEMD3Q9Y2U8 911 aa4.41□□□□□ -1.7
NEDD4-209ENST00000508871 ZNF831Q5JPB2 1677 aa4.4□□□□□ -1.7
NEDD4-209ENST00000508871 MGEA5O60502 916 aa4.4□□□□□ -1.7
NEDD4-209ENST00000508871 RPN1P04843 607 aaKnown RBP4.4□□□□□ -1.7
NEDD4-209ENST00000508871 CNTFP26441 200 aa4.4□□□□□ -1.7
NEDD4-209ENST00000508871 PAFAH1B1P43034 410 aa4.4□□□□□ -1.7
NEDD4-209ENST00000508871 FOXK1P85037 733 aa4.4□□□□□ -1.7
NEDD4-209ENST00000508871 LLGL1Q15334 1064 aa4.4□□□□□ -1.7
NEDD4-209ENST00000508871 CCDC178Q5BJE1 867 aa4.4□□□□□ -1.7
NEDD4-209ENST00000508871 HAUS3Q68CZ6 603 aa4.4□□□□□ -1.7
NEDD4-209ENST00000508871 ATCAYQ86WG3 371 aa4.4□□□□□ -1.7
NEDD4-209ENST00000508871 GRAMD1CQ8IYS0 662 aa4.4□□□□□ -1.7
NEDD4-209ENST00000508871 IFNL3Q8IZI9 196 aa4.4□□□□□ -1.7
NEDD4-209ENST00000508871 SH3GLB2Q9NR46 395 aa4.4□□□□□ -1.7
NEDD4-209ENST00000508871 ARPC4-TTLL3A0A0A6YYG9 625 aa4.4□□□□□ -1.7
NEDD4-209ENST00000508871 IPO8O15397 1037 aaKnown RBP4.4□□□□□ -1.7
NEDD4-209ENST00000508871 HSPA6P17066 643 aa4.4□□□□□ -1.7
NEDD4-209ENST00000508871 VARSP26640 1264 aaKnown RBP4.4□□□□□ -1.7
NEDD4-209ENST00000508871 EN1Q05925 392 aaPredicted RBP4.4□□□□□ -1.7
NEDD4-209ENST00000508871 RNF168Q8IYW5 571 aaPredicted RBP4.4□□□□□ -1.7
NEDD4-209ENST00000508871 CEP57L1Q8IYX8 460 aa4.4□□□□□ -1.7
NEDD4-209ENST00000508871 KIF1BPQ96EK5 621 aa4.4□□□□□ -1.7
NEDD4-209ENST00000508871 CCDC8Q9H0W5 538 aaPredicted RBP4.4□□□□□ -1.7
NEDD4-209ENST00000508871 SEPT10Q9P0V9 454 aa4.4□□□□□ -1.7
NEDD4-209ENST00000508871 POLIQ9UNA4 740 aa4.4□□□□□ -1.7
NEDD4-209ENST00000508871 SALL2Q9Y467 1007 aaPredicted RBP4.4□□□□□ -1.7
NEDD4-209ENST00000508871 IGSF1Q8N6C5 1336 aa4.4□□□□□ -1.71
NEDD4-209ENST00000508871 MSH6P52701 1360 aa4.4□□□□□ -1.71
NEDD4-209ENST00000508871 PEX19P40855 299 aa4.4□□□□□ -1.71
NEDD4-209ENST00000508871 PDE6CP51160 858 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms