RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 TEX13BQ9BXU2 312 aa14.38□□□□□ -0.11
CLDND1-218ENST00000508503 NBPF3Q9H094 633 aa14.38□□□□□ -0.11
CLDND1-218ENST00000508503 SLC5A4Q9NY91 659 aa14.38□□□□□ -0.11
CLDND1-218ENST00000508503 TSPY2A6NKD2 308 aa14.37□□□□□ -0.11
CLDND1-218ENST00000508503 HIP1O00291 1037 aa14.37□□□□□ -0.11
CLDND1-218ENST00000508503 RAD21O60216 631 aa14.37□□□□□ -0.11
CLDND1-218ENST00000508503 MSCO60682 206 aa14.37□□□□□ -0.11
CLDND1-218ENST00000508503 ZBED4O75132 1171 aa14.37□□□□□ -0.11
CLDND1-218ENST00000508503 SLC34A2O95436 690 aa14.37□□□□□ -0.11
CLDND1-218ENST00000508503 CYBAP13498 195 aa14.37□□□□□ -0.11
CLDND1-218ENST00000508503 OAZ1P54368 228 aa14.37□□□□□ -0.11
CLDND1-218ENST00000508503 RCSD1Q6JBY9 416 aa14.37□□□□□ -0.11
CLDND1-218ENST00000508503 LRRC47Q8N1G4 583 aaKnown RBP14.37□□□□□ -0.11
CLDND1-218ENST00000508503 CHURC1Q8WUH1 139 aa14.37□□□□□ -0.11
CLDND1-218ENST00000508503 MAML3Q96JK9 1138 aa14.37□□□□□ -0.11
CLDND1-218ENST00000508503 RIPK3Q9Y572 518 aa14.37□□□□□ -0.11
CLDND1-218ENST00000508503 DNAJC25-GNG10A0A024R161 153 aa14.36□□□□□ -0.11
CLDND1-218ENST00000508503 RANBP6O60518 1105 aaKnown RBP14.36□□□□□ -0.11
CLDND1-218ENST00000508503 NMT2O60551 498 aa14.36□□□□□ -0.11
CLDND1-218ENST00000508503 NT5C2P49902 561 aa14.36□□□□□ -0.11
CLDND1-218ENST00000508503 AKNAD1Q5T1N1 836 aa14.36□□□□□ -0.11
CLDND1-218ENST00000508503 SAMD1Q6SPF0 538 aaPredicted RBP14.36□□□□□ -0.11
CLDND1-218ENST00000508503 STAG1Q8WVM7 1258 aa14.36□□□□□ -0.11
CLDND1-218ENST00000508503 TTC14Q96N46 770 aa14.36□□□□□ -0.11
CLDND1-218ENST00000508503 MMP19Q99542 508 aa14.36□□□□□ -0.11
CLDND1-218ENST00000508503 DDX20Q9UHI6 824 aaKnown RBP14.36□□□□□ -0.11
CLDND1-218ENST00000508503 NRBP1Q9UHY1 535 aa14.36□□□□□ -0.11
CLDND1-218ENST00000508503 NR2E3Q9Y5X4 410 aa14.36□□□□□ -0.11
CLDND1-218ENST00000508503 SMCHD1A6NHR9 2005 aa14.36□□□□□ -0.11
CLDND1-218ENST00000508503 ALPK3Q96L96 1907 aa14.35□□□□□ -0.11
CLDND1-218ENST00000508503 TMEM232C9JQI7 657 aa14.35□□□□□ -0.11
CLDND1-218ENST00000508503 MCCP23508 829 aa14.35□□□□□ -0.11
CLDND1-218ENST00000508503 KCTD2Q14681 263 aa14.35□□□□□ -0.11
CLDND1-218ENST00000508503 HABP4Q5JVS0 413 aaKnown RBP14.35□□□□□ -0.11
CLDND1-218ENST00000508503 SNRNP48Q6IEG0 339 aaKnown RBP14.35□□□□□ -0.11
CLDND1-218ENST00000508503 CWC27Q6UX04 472 aaKnown RBP14.35□□□□□ -0.11
CLDND1-218ENST00000508503 FAM160B2Q86V87 743 aa14.35□□□□□ -0.11
CLDND1-218ENST00000508503 KIFC2Q96AC6 838 aa14.35□□□□□ -0.11
CLDND1-218ENST00000508503 DSCC1Q9BVC3 393 aa14.35□□□□□ -0.11
CLDND1-218ENST00000508503 PRO3102Q9H379 93 aa14.35□□□□□ -0.11
CLDND1-218ENST00000508503 C11orf49Q9H6J7 331 aa14.35□□□□□ -0.11
CLDND1-218ENST00000508503 STX8Q9UNK0 236 aa14.35□□□□□ -0.11
CLDND1-218ENST00000508503 PFASO15067 1338 aa14.35□□□□□ -0.11
CLDND1-218ENST00000508503 SEPT4O43236 478 aa14.34□□□□□ -0.11
CLDND1-218ENST00000508503 GSPT1P15170 499 aaKnown RBP14.34□□□□□ -0.11
CLDND1-218ENST00000508503 SLC1A4P43007 532 aa14.34□□□□□ -0.11
CLDND1-218ENST00000508503 STAT2P52630 851 aa14.34□□□□□ -0.11
CLDND1-218ENST00000508503 IRX6P78412 446 aaPredicted RBP14.34□□□□□ -0.11
CLDND1-218ENST00000508503 TTC22Q5TAA0 569 aa14.34□□□□□ -0.11
CLDND1-218ENST00000508503 BTNL9Q6UXG8 535 aa14.34□□□□□ -0.11
CLDND1-218ENST00000508503 MFSD6Q6ZSS7 791 aa14.34□□□□□ -0.11
CLDND1-218ENST00000508503 MSL3Q8N5Y2 521 aaKnown RBP14.34□□□□□ -0.11
CLDND1-218ENST00000508503 CHST13Q8NET6 341 aa14.34□□□□□ -0.11
CLDND1-218ENST00000508503 TINF2Q9BSI4 451 aa14.34□□□□□ -0.11
CLDND1-218ENST00000508503 DIAPH3Q9NSV4 1193 aa14.34□□□□□ -0.11
CLDND1-218ENST00000508503 COLQQ9Y215 455 aaPredicted RBP14.34□□□□□ -0.11
CLDND1-218ENST00000508503 ZNF536O15090 1300 aa14.34□□□□□ -0.11
CLDND1-218ENST00000508503 PLXNA1Q9UIW2 1896 aa14.33□□□□□ -0.11
CLDND1-218ENST00000508503 TRIOBPQ9H2D6 2365 aa14.33□□□□□ -0.11
CLDND1-218ENST00000508503 ZNF213O14771 459 aa14.33□□□□□ -0.12
CLDND1-218ENST00000508503 EVI5O60447 810 aa14.33□□□□□ -0.12
CLDND1-218ENST00000508503 PGK2P07205 417 aa14.33□□□□□ -0.12
CLDND1-218ENST00000508503 TOP1P11387 765 aaKnown RBP14.33□□□□□ -0.12
CLDND1-218ENST00000508503 HAND2P61296 217 aa14.33□□□□□ -0.12
CLDND1-218ENST00000508503 MAMDC4Q6UXC1 1216 aa14.33□□□□□ -0.12
CLDND1-218ENST00000508503 ZNF467Q7Z7K2 595 aaPredicted RBP14.33□□□□□ -0.12
CLDND1-218ENST00000508503 TBC1D10CQ8IV04 446 aa14.33□□□□□ -0.12
CLDND1-218ENST00000508503 CPXCR1Q8N123 301 aa14.33□□□□□ -0.12
CLDND1-218ENST00000508503 DCAF4Q8WV16 495 aa14.33□□□□□ -0.12
CLDND1-218ENST00000508503 TMEM47Q9BQJ4 181 aa14.33□□□□□ -0.12
CLDND1-218ENST00000508503 RNF41Q9H4P4 317 aaPredicted RBP14.33□□□□□ -0.12
CLDND1-218ENST00000508503 RAVER2Q9HCJ3 691 aaKnown RBP14.33□□□□□ -0.12
CLDND1-218ENST00000508503 FBXO40Q9UH90 709 aa14.33□□□□□ -0.12
CLDND1-218ENST00000508503 FRMPD3Q5JV73 1810 aa14.33□□□□□ -0.12
CLDND1-218ENST00000508503 SZT2Q5T011 3432 aa14.32□□□□□ -0.12
CLDND1-218ENST00000508503 CNGA1P29973 690 aa14.32□□□□□ -0.12
CLDND1-218ENST00000508503 PRAMEF19Q5SWL8 479 aa14.32□□□□□ -0.12
CLDND1-218ENST00000508503 ANKS1AQ92625 1134 aa14.32□□□□□ -0.12
CLDND1-218ENST00000508503 IL25Q9H293 177 aa14.32□□□□□ -0.12
CLDND1-218ENST00000508503 PRR12Q9ULL5 1215 aa14.32□□□□□ -0.12
CLDND1-218ENST00000508503 DNM1LO00429 736 aa14.31□□□□□ -0.12
CLDND1-218ENST00000508503 ZNF865P0CJ78 1059 aaPredicted RBP14.31□□□□□ -0.12
CLDND1-218ENST00000508503 SNHG28P0DPA3 235 aa14.31□□□□□ -0.12
CLDND1-218ENST00000508503 TKFCQ3LXA3 575 aa14.31□□□□□ -0.12
CLDND1-218ENST00000508503 RRP12Q5JTH9 1297 aaKnown RBP14.31□□□□□ -0.12
CLDND1-218ENST00000508503 KCTD1Q719H9 257 aa14.31□□□□□ -0.12
CLDND1-218ENST00000508503 DGKHQ86XP1 1220 aa14.31□□□□□ -0.12
CLDND1-218ENST00000508503 ARRDC4Q8NCT1 418 aa14.31□□□□□ -0.12
CLDND1-218ENST00000508503 ESR2Q92731 530 aa14.31□□□□□ -0.12
CLDND1-218ENST00000508503 DDX11Q96FC9 970 aa14.31□□□□□ -0.12
CLDND1-218ENST00000508503 FGD4Q96M96 766 aa14.31□□□□□ -0.12
CLDND1-218ENST00000508503 TOMM22Q9NS69 142 aa14.31□□□□□ -0.12
CLDND1-218ENST00000508503 CTDP1Q9Y5B0 961 aaPredicted RBP14.31□□□□□ -0.12
CLDND1-218ENST00000508503 LAMA3Q16787 3333 aa14.3□□□□□ -0.12
CLDND1-218ENST00000508503 SNAI1O95863 264 aaPredicted RBP14.3□□□□□ -0.12
CLDND1-218ENST00000508503 CHMLP26374 656 aa14.3□□□□□ -0.12
CLDND1-218ENST00000508503 AGBL1Q96MI9 1066 aa14.3□□□□□ -0.12
CLDND1-218ENST00000508503 CTNNA3Q9UI47 895 aa14.3□□□□□ -0.12
CLDND1-218ENST00000508503 SYNGAP1Q96PV0 1343 aa14.3□□□□□ -0.12
CLDND1-218ENST00000508503 LAMA4Q16363 1823 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms