RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 SSX2IPQ9Y2D8 614 aa8.03□□□□□ -1.12
UBE2D3-224ENST00000508474 TACC3Q9Y6A5 838 aa8.03□□□□□ -1.12
UBE2D3-224ENST00000508474 ZMYM6O95789 1325 aa8.03□□□□□ -1.12
UBE2D3-224ENST00000508474 PABPN1LA6NDY0 278 aaKnown RBP8.03□□□□□ -1.12
UBE2D3-224ENST00000508474 SOWAHDA6NJG2 315 aa8.03□□□□□ -1.12
UBE2D3-224ENST00000508474 PGRMC1O00264 195 aaKnown RBP8.03□□□□□ -1.12
UBE2D3-224ENST00000508474 MGEA5O60502 916 aa8.03□□□□□ -1.12
UBE2D3-224ENST00000508474 DCTN3O75935 186 aa8.03□□□□□ -1.12
UBE2D3-224ENST00000508474 NDUFA10O95299 355 aa8.03□□□□□ -1.12
UBE2D3-224ENST00000508474 H2AFZP0C0S5 128 aa8.03□□□□□ -1.12
UBE2D3-224ENST00000508474 STAT1P42224 750 aa8.03□□□□□ -1.12
UBE2D3-224ENST00000508474 KRT24Q2M2I5 525 aa8.03□□□□□ -1.12
UBE2D3-224ENST00000508474 SLC30A9Q6PML9 568 aa8.03□□□□□ -1.12
UBE2D3-224ENST00000508474 TTLL7Q6ZT98 887 aa8.03□□□□□ -1.12
UBE2D3-224ENST00000508474 H2AFVQ71UI9 128 aa8.03□□□□□ -1.12
UBE2D3-224ENST00000508474 SCYL3Q8IZE3 742 aa8.03□□□□□ -1.12
UBE2D3-224ENST00000508474 EPSTI1Q96J88 318 aa8.03□□□□□ -1.12
UBE2D3-224ENST00000508474 NOVA2Q9UNW9 492 aaKnown RBP8.03□□□□□ -1.12
UBE2D3-224ENST00000508474 A0A1W2PP64 1363 aa8.02□□□□□ -1.12
UBE2D3-224ENST00000508474 TRIM66O15016 1216 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 MAPK13O15264 365 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 HLA-DOAP06340 250 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 SERPINB6P35237 376 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 PDE6CP51160 858 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 C10orf76Q5T2E6 689 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 CABP7Q86V35 215 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 GLT8D2Q9H1C3 349 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 BLZF1Q9H2G9 400 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 ZCCHC17Q9NP64 241 aaKnown RBP8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 DAAM1Q9Y4D1 1078 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 CLIC4Q9Y696 253 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 ADCY9O60503 1353 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 ANKRD65E5RJM6 399 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 ZMYND10O75800 440 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 IFNAR2P48551 515 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 TNNI2P48788 182 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 PPARDQ03181 441 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 LETM2Q2VYF4 491 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 SLC4A8Q2Y0W8 1093 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 PRR16Q569H4 304 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 LINC00301Q8NCQ3 95 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 NEK9Q8TD19 979 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 MRRFQ96E11 262 aaKnown RBP8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 NLRC4Q9NPP4 1024 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 MRC2Q9UBG0 1479 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 NPATQ14207 1427 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 PPP1R12AO14974 1030 aaPredicted RBP8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 RWDD2BP57060 319 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 ACTN3Q08043 901 aaPredicted RBP8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 CRYMQ14894 314 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 CWF19L2Q2TBE0 894 aaKnown RBP8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 V9GY48 417 aaPredicted RBP8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 PLB1Q6P1J6 1458 aa8.02□□□□□ -1.13
UBE2D3-224ENST00000508474 GOLGA8QA0A0J9YX86 632 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 GOLGA8OA6NCC3 632 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 GOLGA8NF8WBI6 632 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 MFAP3LO75121 409 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 RPN1P04843 607 aaKnown RBP8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 ZBED6P86452 979 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 DHX9Q08211 1270 aaKnown RBP8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 RESTQ13127 1097 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 NAA30Q147X3 362 aaPredicted RBP8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 WDR44Q5JSH3 913 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 ACRBPQ8NEB7 543 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 GABPB2Q8TAK5 448 aaPredicted RBP8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 U2AF1L4Q8WU68 220 aaKnown RBP8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 FGD4Q96M96 766 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 KIF21AQ7Z4S6 1674 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 A2MP01023 1474 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 ADCY8P40145 1251 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 PSMD7P51665 324 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 PHEXP78562 749 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 EHHADHQ08426 723 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 MYO1EQ12965 1108 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 PSMD6Q15008 389 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 CCDC93Q567U6 631 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 NCAPH2Q6IBW4 605 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 MAGEB6Q8N7X4 407 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 COG1Q8WTW3 980 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 CCDC97Q96F63 343 aaPredicted RBP8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 STAMBPL1Q96FJ0 436 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 DHTKD1Q96HY7 919 aaPredicted RBP8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 CUEDC2Q9H467 287 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 LRWD1Q9UFC0 647 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 ACEP12821 1306 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 CCDC188H7C350 402 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 EYA2O00167 538 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 GPAA1O43292 621 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 MYL1P05976 194 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 ATF2P15336 505 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 PDE6BP35913 854 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 USP14P54578 494 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 SCRN1Q12765 414 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 NONOQ15233 471 aaKnown RBP eCLIP8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 PHKBQ93100 1093 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 LZTS2Q9BRK4 669 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 EIF2AQ9BY44 585 aaKnown RBP8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 DONSONQ9NYP3 566 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 SPDYE3A6NKU9 549 aa8.01□□□□□ -1.13
UBE2D3-224ENST00000508474 SPECC1L-ADORA2AF8WAN1 911 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms