RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 FAM110CQ1W6H9 321 aa11.94□□□□□ -0.5
HTT-204ENST00000508321 NUP133Q8WUM0 1156 aa11.94□□□□□ -0.5
HTT-204ENST00000508321 ZIC5Q96T25 663 aa11.94□□□□□ -0.5
HTT-204ENST00000508321 SENP2Q9HC62 589 aa11.94□□□□□ -0.5
HTT-204ENST00000508321 ZNF236Q9UL36 1845 aa11.93□□□□□ -0.5
HTT-204ENST00000508321 GOLGA8AA7E2F4 631 aa11.93□□□□□ -0.5
HTT-204ENST00000508321 TMEM232C9JQI7 657 aa11.93□□□□□ -0.5
HTT-204ENST00000508321 DHX16O60231 1041 aaKnown RBP11.93□□□□□ -0.5
HTT-204ENST00000508321 TLR2O60603 784 aa11.93□□□□□ -0.5
HTT-204ENST00000508321 DSG3P32926 999 aa11.93□□□□□ -0.5
HTT-204ENST00000508321 APOBRQ0VD83 1088 aa11.93□□□□□ -0.5
HTT-204ENST00000508321 TRAF1Q13077 416 aa11.93□□□□□ -0.5
HTT-204ENST00000508321 IKQ13123 557 aaPredicted RBP11.93□□□□□ -0.5
HTT-204ENST00000508321 RTN1Q16799 776 aa11.93□□□□□ -0.5
HTT-204ENST00000508321 SYDE2Q5VT97 1194 aa11.93□□□□□ -0.5
HTT-204ENST00000508321 KCTD1Q719H9 257 aa11.93□□□□□ -0.5
HTT-204ENST00000508321 FANCBQ8NB91 859 aa11.93□□□□□ -0.5
HTT-204ENST00000508321 NUP88Q99567 741 aaPredicted RBP11.93□□□□□ -0.5
HTT-204ENST00000508321 SPZ1Q9BXG8 430 aa11.93□□□□□ -0.5
HTT-204ENST00000508321 GPHNQ9NQX3 736 aaPredicted RBP11.93□□□□□ -0.5
HTT-204ENST00000508321 SH2B1Q9NRF2 756 aaPredicted RBP11.93□□□□□ -0.5
HTT-204ENST00000508321 RBM27Q9P2N5 1060 aaKnown RBP11.93□□□□□ -0.5
HTT-204ENST00000508321 MAD2L2Q9UI95 211 aa11.93□□□□□ -0.5
HTT-204ENST00000508321 ADAMTS5Q9UNA0 930 aa11.93□□□□□ -0.5
HTT-204ENST00000508321 RABGAP1Q9Y3P9 1069 aa11.93□□□□□ -0.5
HTT-204ENST00000508321 MGAMO43451 1857 aa11.93□□□□□ -0.5
HTT-204ENST00000508321 FRMPD2Q68DX3 1309 aaPredicted RBP11.92□□□□□ -0.5
HTT-204ENST00000508321 ATP2A1O14983 1001 aa11.92□□□□□ -0.5
HTT-204ENST00000508321 CDKL5O76039 1030 aa11.92□□□□□ -0.5
HTT-204ENST00000508321 CCNA1P78396 465 aa11.92□□□□□ -0.5
HTT-204ENST00000508321 CRHR2Q13324 411 aa11.92□□□□□ -0.5
HTT-204ENST00000508321 CPLX2Q6PUV4 134 aaKnown RBP11.92□□□□□ -0.5
HTT-204ENST00000508321 TMTC3Q6ZXV5 915 aa11.92□□□□□ -0.5
HTT-204ENST00000508321 ZSCAN31Q96LW9 406 aaPredicted RBP11.92□□□□□ -0.5
HTT-204ENST00000508321 MYL10Q9BUA6 226 aa11.92□□□□□ -0.5
HTT-204ENST00000508321 RANBP17Q9H2T7 1088 aaKnown RBP11.92□□□□□ -0.5
HTT-204ENST00000508321 WBP1LQ9NX94 342 aa11.92□□□□□ -0.5
HTT-204ENST00000508321 RNF186Q9NXI6 227 aa11.92□□□□□ -0.5
HTT-204ENST00000508321 MORF4L1Q9UBU8 362 aa11.92□□□□□ -0.5
HTT-204ENST00000508321 BRPF3Q9ULD4 1205 aa11.92□□□□□ -0.5
HTT-204ENST00000508321 LIMCH1Q9UPQ0 1083 aa11.92□□□□□ -0.5
HTT-204ENST00000508321 MTMR7Q9Y216 660 aa11.92□□□□□ -0.5
HTT-204ENST00000508321 CTDP1Q9Y5B0 961 aaPredicted RBP11.92□□□□□ -0.5
HTT-204ENST00000508321 CASP8AP2Q9UKL3 1982 aa11.91□□□□□ -0.5
HTT-204ENST00000508321 KLRF2D3W0D1 207 aa11.91□□□□□ -0.5
HTT-204ENST00000508321 VWA5AO00534 786 aa11.91□□□□□ -0.5
HTT-204ENST00000508321 ZBED4O75132 1171 aa11.91□□□□□ -0.5
HTT-204ENST00000508321 CYP2C8P10632 490 aa11.91□□□□□ -0.5
HTT-204ENST00000508321 BCRP11274 1271 aa11.91□□□□□ -0.5
HTT-204ENST00000508321 PDIA3P30101 505 aaKnown RBP11.91□□□□□ -0.5
HTT-204ENST00000508321 RASGRP2Q7LDG7 609 aa11.91□□□□□ -0.5
HTT-204ENST00000508321 TEX13BQ9BXU2 312 aa11.91□□□□□ -0.5
HTT-204ENST00000508321 SLKQ9H2G2 1235 aaPredicted RBP11.91□□□□□ -0.5
HTT-204ENST00000508321 SLC38A10Q9HBR0 1119 aa11.91□□□□□ -0.5
HTT-204ENST00000508321 PRR12Q9ULL5 1215 aa11.91□□□□□ -0.5
HTT-204ENST00000508321 NAP1L2Q9ULW6 460 aaPredicted RBP11.91□□□□□ -0.5
HTT-204ENST00000508321 HPS5Q9UPZ3 1129 aa11.91□□□□□ -0.5
HTT-204ENST00000508321 PLXNB2O15031 1838 aa11.9□□□□□ -0.5
HTT-204ENST00000508321 hCG_1984214I3L0E3 225 aa11.9□□□□□ -0.5
HTT-204ENST00000508321 PFKFB2O60825 505 aa11.9□□□□□ -0.5
HTT-204ENST00000508321 GOLGA8HP0CJ92 632 aa11.9□□□□□ -0.5
HTT-204ENST00000508321 ZNF713Q8N859 430 aaPredicted RBP11.9□□□□□ -0.5
HTT-204ENST00000508321 SHCBP1Q8NEM2 672 aa11.9□□□□□ -0.5
HTT-204ENST00000508321 GPRC5AQ8NFJ5 357 aa11.9□□□□□ -0.5
HTT-204ENST00000508321 GTF3C6Q969F1 213 aa11.9□□□□□ -0.5
HTT-204ENST00000508321 KIFC2Q96AC6 838 aa11.9□□□□□ -0.5
HTT-204ENST00000508321 ATG4CQ96DT6 458 aa11.9□□□□□ -0.5
HTT-204ENST00000508321 MTMR8Q96EF0 704 aa11.9□□□□□ -0.5
HTT-204ENST00000508321 P2RX7Q99572 595 aaKnown RBP11.9□□□□□ -0.5
HTT-204ENST00000508321 MAF1Q9H063 256 aa11.9□□□□□ -0.5
HTT-204ENST00000508321 RIOX1Q9H6W3 641 aa11.9□□□□□ -0.5
HTT-204ENST00000508321 GPCPD1Q9NPB8 672 aa11.9□□□□□ -0.5
HTT-204ENST00000508321 FBXO28Q9NVF7 368 aa11.9□□□□□ -0.5
HTT-204ENST00000508321 SEC63Q9UGP8 760 aaKnown RBP11.9□□□□□ -0.5
HTT-204ENST00000508321 TPCN1Q9ULQ1 816 aa11.9□□□□□ -0.5
HTT-204ENST00000508321 CNTNAP5Q8WYK1 1306 aa11.89□□□□□ -0.51
HTT-204ENST00000508321 CPLX1O14810 134 aa11.89□□□□□ -0.51
HTT-204ENST00000508321 ZBTB5O15062 677 aa11.89□□□□□ -0.51
HTT-204ENST00000508321 FOXN1O15353 648 aa11.89□□□□□ -0.51
HTT-204ENST00000508321 TRPA1O75762 1119 aa11.89□□□□□ -0.51
HTT-204ENST00000508321 SLC25A27O95847 323 aa11.89□□□□□ -0.51
HTT-204ENST00000508321 ICAM1P05362 532 aa11.89□□□□□ -0.51
HTT-204ENST00000508321 RXRAP19793 462 aa11.89□□□□□ -0.51
HTT-204ENST00000508321 ERVK-9P63128 1117 aa11.89□□□□□ -0.51
HTT-204ENST00000508321 ERVK-24P63145 666 aa11.89□□□□□ -0.51
HTT-204ENST00000508321 CDC37Q16543 378 aaPredicted RBP11.89□□□□□ -0.51
HTT-204ENST00000508321 TKFCQ3LXA3 575 aa11.89□□□□□ -0.51
HTT-204ENST00000508321 TTBK2Q6IQ55 1244 aa11.89□□□□□ -0.51
HTT-204ENST00000508321 C17orf99Q6UX52 265 aa11.89□□□□□ -0.51
HTT-204ENST00000508321 TEX2Q8IWB9 1127 aa11.89□□□□□ -0.51
HTT-204ENST00000508321 ADGRF4Q8IZF3 695 aa11.89□□□□□ -0.51
HTT-204ENST00000508321 FAM177A1Q8N128 213 aaPredicted RBP11.89□□□□□ -0.51
HTT-204ENST00000508321 STAG2Q8N3U4 1231 aa11.89□□□□□ -0.51
HTT-204ENST00000508321 ANKRD13CQ8N6S4 541 aa11.89□□□□□ -0.51
HTT-204ENST00000508321 REPS2Q8NFH8 660 aa11.89□□□□□ -0.51
HTT-204ENST00000508321 RRP36Q96EU6 259 aaKnown RBP11.89□□□□□ -0.51
HTT-204ENST00000508321 ZNF214Q9UL59 606 aaPredicted RBP11.89□□□□□ -0.51
HTT-204ENST00000508321 STK36Q9NRP7 1315 aa11.88□□□□□ -0.51
HTT-204ENST00000508321 BAZ2BQ9UIF8 2168 aaKnown RBP11.88□□□□□ -0.51
HTT-204ENST00000508321 PLEKHA8P1O95397 391 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms