RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 SMNDC1O75940 238 aaKnown RBP eCLIP9.55□□□□□ -0.88
CCDC149-206ENST00000508236 CCT4P50991 539 aaKnown RBP9.55□□□□□ -0.88
CCDC149-206ENST00000508236 PTPN11Q06124 597 aaPredicted RBP9.55□□□□□ -0.88
CCDC149-206ENST00000508236 LRRFIP1Q32MZ4 808 aaKnown RBP9.55□□□□□ -0.88
CCDC149-206ENST00000508236 CEP135Q66GS9 1140 aa9.55□□□□□ -0.88
CCDC149-206ENST00000508236 SCARA3Q6AZY7 606 aa9.55□□□□□ -0.88
CCDC149-206ENST00000508236 FERMT3Q86UX7 667 aa9.55□□□□□ -0.88
CCDC149-206ENST00000508236 ZSWIM2Q8NEG5 633 aa9.55□□□□□ -0.88
CCDC149-206ENST00000508236 JDP2Q8WYK2 163 aa9.55□□□□□ -0.88
CCDC149-206ENST00000508236 TM9SF2Q99805 663 aa9.55□□□□□ -0.88
CCDC149-206ENST00000508236 RRAGDQ9NQL2 400 aaPredicted RBP9.55□□□□□ -0.88
CCDC149-206ENST00000508236 TSPYL4Q9UJ04 414 aa9.55□□□□□ -0.88
CCDC149-206ENST00000508236 ATP10DQ9P241 1426 aa9.55□□□□□ -0.88
CCDC149-206ENST00000508236 LTN1O94822 1766 aa9.55□□□□□ -0.88
CCDC149-206ENST00000508236 FAM208AQ9UK61 1670 aaKnown RBP9.55□□□□□ -0.88
CCDC149-206ENST00000508236 H7C1W4 665 aa9.54□□□□□ -0.88
CCDC149-206ENST00000508236 GUCY2CP25092 1073 aa9.54□□□□□ -0.88
CCDC149-206ENST00000508236 ZNF252P-AS1Q0IIN9 211 aa9.54□□□□□ -0.88
CCDC149-206ENST00000508236 KRT24Q2M2I5 525 aa9.54□□□□□ -0.88
CCDC149-206ENST00000508236 TTC22Q5TAA0 569 aa9.54□□□□□ -0.88
CCDC149-206ENST00000508236 MRM1Q6IN84 353 aaKnown RBP9.54□□□□□ -0.88
CCDC149-206ENST00000508236 TRIM46Q7Z4K8 759 aa9.54□□□□□ -0.88
CCDC149-206ENST00000508236 ABHD17AQ96GS6 310 aa9.54□□□□□ -0.88
CCDC149-206ENST00000508236 IER2Q9BTL4 223 aa9.54□□□□□ -0.88
CCDC149-206ENST00000508236 GTPBP4Q9BZE4 634 aaKnown RBP9.54□□□□□ -0.88
CCDC149-206ENST00000508236 HOMER2Q9NSB8 354 aa9.54□□□□□ -0.88
CCDC149-206ENST00000508236 NCOA3Q9Y6Q9 1424 aa9.54□□□□□ -0.88
CCDC149-206ENST00000508236 ZNF142P52746 1687 aaPredicted RBP9.54□□□□□ -0.88
CCDC149-206ENST00000508236 MSH6P52701 1360 aa9.53□□□□□ -0.88
CCDC149-206ENST00000508236 GNAT3A8MTJ3 354 aa9.53□□□□□ -0.88
CCDC149-206ENST00000508236 LETM1O95202 739 aaPredicted RBP9.53□□□□□ -0.88
CCDC149-206ENST00000508236 HOXC9P31274 260 aa9.53□□□□□ -0.88
CCDC149-206ENST00000508236 SLC20A2Q08357 652 aa9.53□□□□□ -0.88
CCDC149-206ENST00000508236 PCSK7Q16549 785 aa9.53□□□□□ -0.88
CCDC149-206ENST00000508236 ODR4Q5SWX8 454 aa9.53□□□□□ -0.88
CCDC149-206ENST00000508236 CEP85Q6P2H3 762 aa9.53□□□□□ -0.88
CCDC149-206ENST00000508236 EEPD1Q7L9B9 569 aa9.53□□□□□ -0.88
CCDC149-206ENST00000508236 VN1R5Q7Z5H4 357 aa9.53□□□□□ -0.88
CCDC149-206ENST00000508236 PRPF38AQ8NAV1 312 aaKnown RBP9.53□□□□□ -0.88
CCDC149-206ENST00000508236 ZFP42Q96MM3 310 aa9.53□□□□□ -0.88
CCDC149-206ENST00000508236 CEP89Q96ST8 783 aa9.53□□□□□ -0.88
CCDC149-206ENST00000508236 STK31Q9BXU1 1019 aa9.53□□□□□ -0.88
CCDC149-206ENST00000508236 IGFLR1Q9H665 355 aa9.53□□□□□ -0.88
CCDC149-206ENST00000508236 SOX13Q9UN79 622 aa9.53□□□□□ -0.88
CCDC149-206ENST00000508236 NWD1Q149M9 1564 aa9.53□□□□□ -0.88
CCDC149-206ENST00000508236 MEIS3P2A8K0S8 358 aa9.52□□□□□ -0.89
CCDC149-206ENST00000508236 KCNA6P17658 529 aa9.52□□□□□ -0.89
CCDC149-206ENST00000508236 EIF2AK2P19525 551 aaKnown RBP9.52□□□□□ -0.89
CCDC149-206ENST00000508236 CNGA1P29973 690 aa9.52□□□□□ -0.89
CCDC149-206ENST00000508236 DMTNQ08495 405 aa9.52□□□□□ -0.89
CCDC149-206ENST00000508236 C21orf62-AS1Q17RA5 79 aa9.52□□□□□ -0.89
CCDC149-206ENST00000508236 CCDC30Q5VVM6 783 aa9.52□□□□□ -0.89
CCDC149-206ENST00000508236 ADAMTSL4Q6UY14 1074 aa9.52□□□□□ -0.89
CCDC149-206ENST00000508236 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.52□□□□□ -0.89
CCDC149-206ENST00000508236 FMNL3Q8IVF7 1028 aa9.52□□□□□ -0.89
CCDC149-206ENST00000508236 ZSCAN1Q8NBB4 408 aa9.52□□□□□ -0.89
CCDC149-206ENST00000508236 MAP3K5Q99683 1374 aa9.51□□□□□ -0.89
CCDC149-206ENST00000508236 UPK3BL1B0FP48 263 aa9.51□□□□□ -0.89
CCDC149-206ENST00000508236 UPK3BL2E5RIL1 263 aa9.51□□□□□ -0.89
CCDC149-206ENST00000508236 MAP4K4O95819 1239 aaPredicted RBP9.51□□□□□ -0.89
CCDC149-206ENST00000508236 HSP90AB1P08238 724 aaKnown RBP9.51□□□□□ -0.89
CCDC149-206ENST00000508236 FAM153BP0C7A2 387 aa9.51□□□□□ -0.89
CCDC149-206ENST00000508236 PTPRAP18433 802 aa9.51□□□□□ -0.89
CCDC149-206ENST00000508236 PTMSP20962 102 aa9.51□□□□□ -0.89
CCDC149-206ENST00000508236 TMEM67Q5HYA8 995 aa9.51□□□□□ -0.89
CCDC149-206ENST00000508236 HGSNATQ68CP4 663 aa9.51□□□□□ -0.89
CCDC149-206ENST00000508236 CASC1Q6TDU7 716 aa9.51□□□□□ -0.89
CCDC149-206ENST00000508236 DHX37Q8IY37 1157 aaKnown RBP9.51□□□□□ -0.89
CCDC149-206ENST00000508236 DDX54Q8TDD1 881 aaKnown RBP9.51□□□□□ -0.89
CCDC149-206ENST00000508236 TMEM40Q8WWA1 233 aa9.51□□□□□ -0.89
CCDC149-206ENST00000508236 MEIS3Q99687 375 aa9.51□□□□□ -0.89
CCDC149-206ENST00000508236 SPATA9Q9BWV2 254 aa9.51□□□□□ -0.89
CCDC149-206ENST00000508236 DNAJB12Q9NXW2 375 aaKnown RBP9.51□□□□□ -0.89
CCDC149-206ENST00000508236 MIS18AQ9NYP9 233 aa9.51□□□□□ -0.89
CCDC149-206ENST00000508236 SLC12A7Q9Y666 1083 aa9.51□□□□□ -0.89
CCDC149-206ENST00000508236 PHRF1Q9P1Y6 1649 aaKnown RBP9.51□□□□□ -0.89
CCDC149-206ENST00000508236 SETD1BQ9UPS6 1966 aaKnown RBP9.51□□□□□ -0.89
CCDC149-206ENST00000508236 GNAI3P08754 354 aa9.5□□□□□ -0.89
CCDC149-206ENST00000508236 ESRRAP11474 423 aaPredicted RBP9.5□□□□□ -0.89
CCDC149-206ENST00000508236 GSPT1P15170 499 aaKnown RBP9.5□□□□□ -0.89
CCDC149-206ENST00000508236 DDIT3P35638 169 aa9.5□□□□□ -0.89
CCDC149-206ENST00000508236 TAF7Q15545 349 aaPredicted RBP9.5□□□□□ -0.89
CCDC149-206ENST00000508236 DBN1Q16643 649 aa9.5□□□□□ -0.89
CCDC149-206ENST00000508236 TM4SF20Q53R12 229 aa9.5□□□□□ -0.89
CCDC149-206ENST00000508236 FAM182BQ5T319 152 aa9.5□□□□□ -0.89
CCDC149-206ENST00000508236 MAP1SQ66K74 1059 aaPredicted RBP9.5□□□□□ -0.89
CCDC149-206ENST00000508236 MPRIPQ6WCQ1 1025 aa9.5□□□□□ -0.89
CCDC149-206ENST00000508236 G2E3Q7L622 706 aa9.5□□□□□ -0.89
CCDC149-206ENST00000508236 PDZD3Q86UT5 571 aa9.5□□□□□ -0.89
CCDC149-206ENST00000508236 ANKLE2Q86XL3 938 aa9.5□□□□□ -0.89
CCDC149-206ENST00000508236 JAMLQ86YT9 394 aa9.5□□□□□ -0.89
CCDC149-206ENST00000508236 TAB3Q8N5C8 712 aaPredicted RBP9.5□□□□□ -0.89
CCDC149-206ENST00000508236 NINJ1Q92982 152 aa9.5□□□□□ -0.89
CCDC149-206ENST00000508236 MFSD3Q96ES6 412 aa9.5□□□□□ -0.89
CCDC149-206ENST00000508236 KIF2CQ99661 725 aa9.5□□□□□ -0.89
CCDC149-206ENST00000508236 ADAM19Q9H013 955 aa9.5□□□□□ -0.89
CCDC149-206ENST00000508236 ATXN7L1Q9ULK2 861 aaPredicted RBP9.5□□□□□ -0.89
CCDC149-206ENST00000508236 ATP8A1Q9Y2Q0 1164 aa9.5□□□□□ -0.89
CCDC149-206ENST00000508236 RIPOR2Q9Y4F9 1068 aa9.5□□□□□ -0.89
CCDC149-206ENST00000508236 PXDNLA1KZ92 1463 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms