RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 DNM1Q05193 864 aaKnown RBP8.58□□□□□ -1.04
PDGFRA-206ENST00000508170 SF3B3Q15393 1217 aaKnown RBP8.58□□□□□ -1.04
PDGFRA-206ENST00000508170 SHROOM1Q2M3G4 852 aaPredicted RBP8.58□□□□□ -1.04
PDGFRA-206ENST00000508170 MUM1Q2TAK8 710 aa8.58□□□□□ -1.04
PDGFRA-206ENST00000508170 CCDC30Q5VVM6 783 aa8.58□□□□□ -1.04
PDGFRA-206ENST00000508170 FAM196AQ6ZSG2 479 aa8.58□□□□□ -1.04
PDGFRA-206ENST00000508170 SLC44A2Q8IWA5 706 aaPredicted RBP8.58□□□□□ -1.04
PDGFRA-206ENST00000508170 SLFN12Q8IYM2 578 aa8.58□□□□□ -1.04
PDGFRA-206ENST00000508170 ST13P5Q8NFI4 369 aaPredicted RBP8.58□□□□□ -1.04
PDGFRA-206ENST00000508170 SCG3Q8WXD2 468 aaKnown RBP8.58□□□□□ -1.04
PDGFRA-206ENST00000508170 RUSC1Q9BVN2 902 aa8.58□□□□□ -1.04
PDGFRA-206ENST00000508170 ADAM33Q9BZ11 813 aa8.58□□□□□ -1.04
PDGFRA-206ENST00000508170 TCF7L1Q9HCS4 588 aa8.58□□□□□ -1.04
PDGFRA-206ENST00000508170 C6orf203Q9P0P8 240 aaPredicted RBP8.58□□□□□ -1.04
PDGFRA-206ENST00000508170 ANKIB1Q9P2G1 1089 aa8.58□□□□□ -1.04
PDGFRA-206ENST00000508170 MAP4K5Q9Y4K4 846 aa8.58□□□□□ -1.04
PDGFRA-206ENST00000508170 MASP2O00187 686 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 PPEF1O14829 653 aaPredicted RBP8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 P4HA2O15460 535 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 BTF3P20290 206 aaKnown RBP8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 WTAPQ15007 396 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 ASIC2Q16515 512 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 TRIM68Q6AZZ1 485 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 FCHSD1Q86WN1 690 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 TEKT1Q969V4 418 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 ABCF3Q9NUQ8 709 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 ATP6V0A2Q9Y487 856 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 TM4SF4P48230 202 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 CSE1LP55060 971 aaKnown RBP8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 NLRP12P59046 1061 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 KCNC4Q03721 635 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 GRIN2CQ14957 1233 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 RRP12Q5JTH9 1297 aaKnown RBP8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 TLDC1Q6P9B6 456 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 EP400NLQ6ZTU2 488 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 ZNF75CPQ92670 426 aaPredicted RBP8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 TMEM74Q96NL1 305 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 VPS45Q9NRW7 570 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 MTRRQ9UBK8 725 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 CFAP45Q9UL16 551 aa8.57□□□□□ -1.04
PDGFRA-206ENST00000508170 C2orf81A6NN90 581 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 BRINP1O60477 761 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 SDSP20132 328 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 MX2P20592 715 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 GIPRP48546 466 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 EIF6P56537 245 aaKnown RBP8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 PPFIA1Q13136 1202 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 GPR155Q7Z3F1 870 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 BICD2Q8TD16 824 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 UBXN10Q96LJ8 280 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 KIF2CQ99661 725 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 LZTS2Q9BRK4 669 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 UNC45AQ9H3U1 944 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 BRD9Q9H8M2 597 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 AGO4Q9HCK5 861 aaKnown RBP8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 GOLGA3Q08378 1498 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 BAZ1BQ9UIG0 1483 aaKnown RBP8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 LRRC10BA6NIK2 292 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 TRIM75PA6NK02 468 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 GIPC1O14908 333 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 ADCY3O60266 1144 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 DDAH1O94760 285 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 KRT1P04264 644 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 CCNFP41002 786 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 STAT1P42224 750 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 PWP1Q13610 501 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 SLC10A6Q3KNW5 377 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 PDE12Q6L8Q7 609 aaKnown RBP8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 BRSK1Q8TDC3 778 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 ADAMTS18Q8TE60 1221 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 SSH3Q8TE77 659 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 KCTD13Q8WZ19 329 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 SLC39A7Q92504 469 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 WDR12Q9GZL7 423 aaKnown RBP8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 ARGLU1Q9NWB6 273 aaPredicted RBP8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 ANKRD6Q9Y2G4 727 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 CEP83Q9Y592 693 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 N6AMT1Q9Y5N5 214 aa8.56□□□□□ -1.04
PDGFRA-206ENST00000508170 C3orf80F5H4A9 247 aa8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 FRS3O43559 492 aa8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 DKC1O60832 514 aaKnown RBP eCLIP8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 PARP1P09874 1014 aaKnown RBP8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 AKR1B1P15121 316 aa8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 LIMK1P53667 647 aa8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 PIP4K2BP78356 416 aa8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 SKOR1P84550 965 aa8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 GTF2H3Q13889 308 aa8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 DNTTIP2Q5QJE6 756 aaKnown RBP8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 MRM1Q6IN84 353 aaKnown RBP8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 BNC2Q6ZN30 1099 aaPredicted RBP8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 SAPCD2Q86UD0 394 aa8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 ABTB2Q8N961 1025 aa8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 FNIP1Q8TF40 1166 aa8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 ASB2Q96Q27 587 aa8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 ALPK1Q96QP1 1244 aa8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 LSM14BQ9BX40 385 aaKnown RBP8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 KCNQ5Q9NR82 932 aa8.55□□□□□ -1.04
PDGFRA-206ENST00000508170 IRAK4Q9NWZ3 460 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms