RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 PATL2C9JE40 543 aaKnown RBP5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 C6orf229H3BNL8 230 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 ZBTB24O43167 697 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 PPFIA4O75335 1185 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 MYL1P05976 194 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 CSF1RP07333 972 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 CALM1P0DP23 149 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 CALM2P0DP24 149 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 CALM3P0DP25 149 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 PCP11498 1178 aaKnown RBP5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 PDE6AP16499 860 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 BMP6P22004 513 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 ARID4AP29374 1257 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 CDC27P30260 824 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 ADORA1P30542 326 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 KRT2P35908 639 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 PBX1P40424 430 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 USP8P40818 1118 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 PPP1R2P41236 205 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 TRAPPC10P48553 1259 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 AARSP49588 968 aaKnown RBP eCLIP5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 EIF5P55010 431 aaKnown RBP5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 FMR1Q06787 632 aaKnown RBP eCLIP5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 RBL2Q08999 1139 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 STIM1Q13586 685 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 CUL4BQ13620 913 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 MCM6Q14566 821 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 WTAPQ15007 396 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 TTC31Q49AM3 519 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 AKNAD1Q5T1N1 836 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 GBP6Q6ZN66 633 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 Q6ZNB5 142 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 CYB5R4Q7L1T6 521 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 FOXP4Q8IVH2 680 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 SLC35F6Q8N357 371 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 ZBTB38Q8NAP3 1195 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 STAG1Q8WVM7 1258 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 PHKBQ93100 1093 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 ZNF594Q96JF6 807 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 NUP88Q99567 741 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 UBAC1Q9BSL1 405 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 CRACR2AQ9BSW2 395 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 DESI2Q9BSY9 194 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 NUP58Q9BVL2 599 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 TSGA10Q9BZW7 698 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 ANKZF1Q9H8Y5 726 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 MRPL44Q9H9J2 332 aaKnown RBP5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 ABCB6Q9NP58 842 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 STRN4Q9NRL3 753 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 RBM28Q9NW13 759 aaKnown RBP5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 LIMA1Q9UHB6 759 aaKnown RBP5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 RSPH14Q9UHP6 348 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 PUF60Q9UHX1 559 aaKnown RBP5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 RWDD2AQ9UIY3 292 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 MYO6Q9UM54 1294 aa5.59□□□□□ -1.51
HMGB3P16-201ENST00000508037 MEGF6O75095 1541 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 MROH5Q6ZUA9 1318 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 ZNF532Q9HCE3 1301 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 TJP1Q07157 1748 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 NUP188Q5SRE5 1749 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 NWD2Q9ULI1 1742 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 A0A1W2PQC6 194 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 ANO9A1A5B4 782 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 MOXD2PA6NHM9 499 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 BTBD18B2RXH4 712 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 H3BQF6 201 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 H7C1D1 291 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 PSMD14O00487 310 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 NRG2O14511 850 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 N4BP3O15049 544 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 FANCGO15287 622 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 CYP27B1O15528 508 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 KRT86O43790 486 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 OPA1O60313 960 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 RANBP6O60518 1105 aaKnown RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 IDH1O75874 414 aaKnown RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 CLSTN1O94985 981 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 SLC5A1P13866 664 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 NDUFV2P19404 249 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 EEF1GP26641 437 aaKnown RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 HOXA7P31268 230 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 CASP14P31944 242 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 CYLC1P35663 651 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 RPIAP49247 311 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 NT5C2P49902 561 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 MMP16P51512 607 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 USP14P54578 494 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 ZC3H6P61129 1189 aaKnown RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 GOLGA8FQ08AF8 430 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 GOLGA8DPQ0D2H9 430 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 DPYDQ12882 1025 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 PAK1Q13153 545 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 PUM3Q15397 648 aaKnown RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 DNAJC21Q5F1R6 531 aaKnown RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 PLA2G2CQ5R387 149 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 ZNF697Q5TEC3 545 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 NBPF10Q6P3W6 841 aaKnown RBP5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 RAD9BQ6WBX8 426 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 LDHAL6AQ6ZMR3 332 aa5.58□□□□□ -1.52
HMGB3P16-201ENST00000508037 TTLL7Q6ZT98 887 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms