RNA–Protein interactions for RNA: ENST00000507714.1

TRIO-209, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-209ENST00000507714 CNKSR2Q8WXI2 1034 aa10.46□□□□□ -0.73
TRIO-209ENST00000507714 RPAP3Q9H6T3 665 aaPredicted RBP10.46□□□□□ -0.73
TRIO-209ENST00000507714 EMILIN3Q9NT22 766 aa10.46□□□□□ -0.73
TRIO-209ENST00000507714 HOXC10Q9NYD6 342 aa10.46□□□□□ -0.73
TRIO-209ENST00000507714 SEC63Q9UGP8 760 aaKnown RBP10.46□□□□□ -0.73
TRIO-209ENST00000507714 PNMA3Q9UL41 463 aa10.46□□□□□ -0.73
TRIO-209ENST00000507714 HPS5Q9UPZ3 1129 aa10.46□□□□□ -0.73
TRIO-209ENST00000507714 NID2Q14112 1375 aa10.46□□□□□ -0.74
TRIO-209ENST00000507714 FRMPD2Q68DX3 1309 aaPredicted RBP10.45□□□□□ -0.74
TRIO-209ENST00000507714 FOXN1O15353 648 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 CD2BP2O95400 341 aaKnown RBP10.45□□□□□ -0.74
TRIO-209ENST00000507714 GOLGA8HP0CJ92 632 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 PDIA4P13667 645 aaKnown RBP10.45□□□□□ -0.74
TRIO-209ENST00000507714 IFNAR1P17181 557 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 VCAM1P19320 739 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 ADD1P35611 737 aaKnown RBP10.45□□□□□ -0.74
TRIO-209ENST00000507714 IRX3P78415 501 aaPredicted RBP10.45□□□□□ -0.74
TRIO-209ENST00000507714 CUL4AQ13619 759 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 COG2Q14746 738 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 ARHGEF6Q15052 776 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 SYDE2Q5VT97 1194 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 TMTC3Q6ZXV5 915 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 KCTD1Q719H9 257 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 IFNL1Q8IU54 200 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 PRPF38AQ8NAV1 312 aaKnown RBP10.45□□□□□ -0.74
TRIO-209ENST00000507714 FAM184AQ8NB25 1140 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 RRP36Q96EU6 259 aaKnown RBP10.45□□□□□ -0.74
TRIO-209ENST00000507714 SPZ1Q9BXG8 430 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 ZFYVE28Q9HCC9 887 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 NCOA5Q9HCD5 579 aaKnown RBP10.45□□□□□ -0.74
TRIO-209ENST00000507714 RNF186Q9NXI6 227 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 MAD2L2Q9UI95 211 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 AGTPBP1Q9UPW5 1226 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 SMC3Q9UQE7 1217 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 SLC45A1Q9Y2W3 748 aa10.45□□□□□ -0.74
TRIO-209ENST00000507714 MYPNQ86TC9 1320 aa10.44□□□□□ -0.74
TRIO-209ENST00000507714 ZBED4O75132 1171 aa10.44□□□□□ -0.74
TRIO-209ENST00000507714 FLOT1O75955 427 aa10.44□□□□□ -0.74
TRIO-209ENST00000507714 XBP1P17861 261 aa10.44□□□□□ -0.74
TRIO-209ENST00000507714 PDCP20941 246 aa10.44□□□□□ -0.74
TRIO-209ENST00000507714 HOXA7P31268 230 aaPredicted RBP10.44□□□□□ -0.74
TRIO-209ENST00000507714 LBX1P52954 281 aa10.44□□□□□ -0.74
TRIO-209ENST00000507714 TAF1CQ15572 869 aaPredicted RBP10.44□□□□□ -0.74
TRIO-209ENST00000507714 BTNL9Q6UXG8 535 aa10.44□□□□□ -0.74
TRIO-209ENST00000507714 CCDC82Q8N4S0 544 aa10.44□□□□□ -0.74
TRIO-209ENST00000507714 GTF3C2Q8WUA4 911 aaPredicted RBP10.44□□□□□ -0.74
TRIO-209ENST00000507714 NUP88Q99567 741 aaPredicted RBP10.44□□□□□ -0.74
TRIO-209ENST00000507714 SLF1Q9BQI6 1058 aa10.44□□□□□ -0.74
TRIO-209ENST00000507714 SLC26A6Q9BXS9 759 aa10.44□□□□□ -0.74
TRIO-209ENST00000507714 RNF26Q9BY78 433 aaPredicted RBP10.44□□□□□ -0.74
TRIO-209ENST00000507714 CWC22Q9HCG8 908 aaKnown RBP10.44□□□□□ -0.74
TRIO-209ENST00000507714 VAT1LQ9HCJ6 419 aa10.44□□□□□ -0.74
TRIO-209ENST00000507714 ZCCHC17Q9NP64 241 aaKnown RBP10.44□□□□□ -0.74
TRIO-209ENST00000507714 PRDM10Q9NQV6 1147 aa10.44□□□□□ -0.74
TRIO-209ENST00000507714 STK36Q9NRP7 1315 aa10.43□□□□□ -0.74
TRIO-209ENST00000507714 PRPF3O43395 683 aaKnown RBP10.43□□□□□ -0.74
TRIO-209ENST00000507714 DEXIO95424 95 aa10.43□□□□□ -0.74
TRIO-209ENST00000507714 LARGE1O95461 756 aa10.43□□□□□ -0.74
TRIO-209ENST00000507714 CDC27P30260 824 aa10.43□□□□□ -0.74
TRIO-209ENST00000507714 GJA5P36382 358 aa10.43□□□□□ -0.74
TRIO-209ENST00000507714 TRIM29Q14134 588 aa10.43□□□□□ -0.74
TRIO-209ENST00000507714 KIF22Q14807 665 aa10.43□□□□□ -0.74
TRIO-209ENST00000507714 SAMD1Q6SPF0 538 aaPredicted RBP10.43□□□□□ -0.74
TRIO-209ENST00000507714 CATSPERGQ6ZRH7 1159 aa10.43□□□□□ -0.74
TRIO-209ENST00000507714 ANKRD23Q86SG2 305 aa10.43□□□□□ -0.74
TRIO-209ENST00000507714 STAG2Q8N3U4 1231 aa10.43□□□□□ -0.74
TRIO-209ENST00000507714 SRBD1Q8N5C6 995 aaKnown RBP10.43□□□□□ -0.74
TRIO-209ENST00000507714 CCDC12Q8WUD4 166 aaPredicted RBP10.43□□□□□ -0.74
TRIO-209ENST00000507714 KIFC2Q96AC6 838 aa10.43□□□□□ -0.74
TRIO-209ENST00000507714 IPO9Q96P70 1041 aaKnown RBP10.43□□□□□ -0.74
TRIO-209ENST00000507714 ZIC5Q96T25 663 aa10.43□□□□□ -0.74
TRIO-209ENST00000507714 PARK7Q99497 189 aaKnown RBP10.43□□□□□ -0.74
TRIO-209ENST00000507714 UBA5Q9GZZ9 404 aa10.43□□□□□ -0.74
TRIO-209ENST00000507714 RIOX1Q9H6W3 641 aa10.43□□□□□ -0.74
TRIO-209ENST00000507714 FAM217BQ9NTX9 383 aaPredicted RBP10.43□□□□□ -0.74
TRIO-209ENST00000507714 ORC3Q9UBD5 711 aaPredicted RBP10.43□□□□□ -0.74
TRIO-209ENST00000507714 PPP1R9AQ9ULJ8 1098 aa10.43□□□□□ -0.74
TRIO-209ENST00000507714 PRR12Q9ULL5 1215 aa10.43□□□□□ -0.74
TRIO-209ENST00000507714 V9GY48 417 aaPredicted RBP10.43□□□□□ -0.74
TRIO-209ENST00000507714 LOC285556D6RIA3 1793 aa10.43□□□□□ -0.74
TRIO-209ENST00000507714 CEP350Q5VT06 3117 aa10.43□□□□□ -0.74
TRIO-209ENST00000507714 PNMA6FA0A0J9YX94 578 aa10.42□□□□□ -0.74
TRIO-209ENST00000507714 PTPDC1A2A3K4 754 aa10.42□□□□□ -0.74
TRIO-209ENST00000507714 TESPA1A2RU30 521 aaPredicted RBP10.42□□□□□ -0.74
TRIO-209ENST00000507714 hCG_1984214I3L0E3 225 aa10.42□□□□□ -0.74
TRIO-209ENST00000507714 ZBTB5O15062 677 aa10.42□□□□□ -0.74
TRIO-209ENST00000507714 PLEKHA8P1O95397 391 aa10.42□□□□□ -0.74
TRIO-209ENST00000507714 FMNL1O95466 1100 aaPredicted RBP10.42□□□□□ -0.74
TRIO-209ENST00000507714 TBC1D8O95759 1140 aa10.42□□□□□ -0.74
TRIO-209ENST00000507714 HSPA8P11142 646 aaKnown RBP10.42□□□□□ -0.74
TRIO-209ENST00000507714 SLC16A2P36021 539 aa10.42□□□□□ -0.74
TRIO-209ENST00000507714 KIAA1755Q5JYT7 1200 aa10.42□□□□□ -0.74
TRIO-209ENST00000507714 TTBK2Q6IQ55 1244 aa10.42□□□□□ -0.74
TRIO-209ENST00000507714 ADGRF4Q8IZF3 695 aa10.42□□□□□ -0.74
TRIO-209ENST00000507714 FAM177A1Q8N128 213 aaPredicted RBP10.42□□□□□ -0.74
TRIO-209ENST00000507714 ZNF713Q8N859 430 aaPredicted RBP10.42□□□□□ -0.74
TRIO-209ENST00000507714 MB21D1Q8N884 522 aa10.42□□□□□ -0.74
TRIO-209ENST00000507714 SMCR8Q8TEV9 937 aaPredicted RBP10.42□□□□□ -0.74
TRIO-209ENST00000507714 MS4A4AQ96JQ5 239 aa10.42□□□□□ -0.74
TRIO-209ENST00000507714 TSKSQ9UJT2 592 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms