RNA–Protein interactions for RNA: ENST00000507469.5

SMG7-212, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-212ENST00000507469 USP49Q70CQ1 688 aa13.13□□□□□ -0.31
SMG7-212ENST00000507469 SECISBP2LQ93073 1101 aaKnown RBP13.13□□□□□ -0.31
SMG7-212ENST00000507469 SHTN1A0MZ66 631 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 TMCO5BA8MYB1 307 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 KIAA0754O94854 1291 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 CYP2D6P10635 497 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 HLTFQ14527 1009 aaKnown RBP eCLIP13.12□□□□□ -0.31
SMG7-212ENST00000507469 TSPYL1Q9H0U9 437 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 HAUS4Q9H6D7 363 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 SAR1BQ9Y6B6 198 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 NALCNQ8IZF0 1738 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 MFAP3LO75121 409 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 PNMA6AP0CW24 399 aaPredicted RBP13.12□□□□□ -0.31
SMG7-212ENST00000507469 NEK8Q86SG6 692 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 GPIHBP1Q8IV16 184 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 DYNLL2Q96FJ2 89 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 MAP3K14Q99558 947 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 PARD6BQ9BYG5 372 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 HPSEQ9Y251 543 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 JCADQ9P266 1359 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 LTN1O94822 1766 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 PRDX5P30044 214 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 GRIN1Q05586 938 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 CUL4BQ13620 913 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 RGS22Q8NE09 1264 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 FAM207AQ9NSI2 230 aaPredicted RBP13.12□□□□□ -0.31
SMG7-212ENST00000507469 ARL6IP4Q66PJ3 421 aaKnown RBP13.12□□□□□ -0.31
SMG7-212ENST00000507469 NBPF11Q86T75 865 aa13.12□□□□□ -0.31
SMG7-212ENST00000507469 RBM17Q96I25 401 aaKnown RBP13.12□□□□□ -0.31
SMG7-212ENST00000507469 ATP8B1O43520 1251 aa13.11□□□□□ -0.31
SMG7-212ENST00000507469 TBCAO75347 108 aaKnown RBP13.11□□□□□ -0.31
SMG7-212ENST00000507469 IVLP07476 585 aa13.11□□□□□ -0.31
SMG7-212ENST00000507469 CELF1Q92879 486 aaKnown RBP13.11□□□□□ -0.31
SMG7-212ENST00000507469 DCP1AQ9NPI6 582 aaPredicted RBP13.11□□□□□ -0.31
SMG7-212ENST00000507469 TMOD2Q9NZR1 351 aa13.11□□□□□ -0.31
SMG7-212ENST00000507469 MORC2Q9Y6X9 1032 aaPredicted RBP13.11□□□□□ -0.31
SMG7-212ENST00000507469 TCHHQ07283 1943 aa13.11□□□□□ -0.31
SMG7-212ENST00000507469 TUBGCP2Q9BSJ2 902 aa13.11□□□□□ -0.31
SMG7-212ENST00000507469 TOM1O60784 492 aa13.11□□□□□ -0.31
SMG7-212ENST00000507469 HSF2BPO75031 334 aa13.11□□□□□ -0.31
SMG7-212ENST00000507469 EEF1GP26641 437 aaKnown RBP13.11□□□□□ -0.31
SMG7-212ENST00000507469 NTRK3Q16288 839 aa13.11□□□□□ -0.31
SMG7-212ENST00000507469 PFKFB3Q16875 520 aaPredicted RBP13.11□□□□□ -0.31
SMG7-212ENST00000507469 MFSD14BQ5SR56 506 aa13.11□□□□□ -0.31
SMG7-212ENST00000507469 CCDC84Q86UT8 332 aaPredicted RBP13.11□□□□□ -0.31
SMG7-212ENST00000507469 ZNF219Q9P2Y4 722 aaPredicted RBP13.11□□□□□ -0.31
SMG7-212ENST00000507469 GDAQ9Y2T3 454 aa13.11□□□□□ -0.31
SMG7-212ENST00000507469 B4DLN1 442 aa13.11□□□□□ -0.31
SMG7-212ENST00000507469 BTDP43251 543 aa13.11□□□□□ -0.31
SMG7-212ENST00000507469 TCP11X2Q5H9J9 407 aa13.11□□□□□ -0.31
SMG7-212ENST00000507469 TYW1BQ6NUM6 668 aa13.11□□□□□ -0.31
SMG7-212ENST00000507469 CCDC65Q8IXS2 484 aa13.11□□□□□ -0.31
SMG7-212ENST00000507469 USP17L3A6NCW0 530 aa13.1□□□□□ -0.31
SMG7-212ENST00000507469 USP17L4A6NCW7 530 aa13.1□□□□□ -0.31
SMG7-212ENST00000507469 LAD1O00515 517 aa13.1□□□□□ -0.31
SMG7-212ENST00000507469 NCAPHQ15003 741 aa13.1□□□□□ -0.31
SMG7-212ENST00000507469 LONRF2Q1L5Z9 754 aa13.1□□□□□ -0.31
SMG7-212ENST00000507469 USP17L1Q7RTZ2 530 aa13.1□□□□□ -0.31
SMG7-212ENST00000507469 C2CD5Q86YS7 1000 aa13.1□□□□□ -0.31
SMG7-212ENST00000507469 FAM84BQ96KN1 310 aaPredicted RBP13.1□□□□□ -0.31
SMG7-212ENST00000507469 RSPH14Q9UHP6 348 aa13.1□□□□□ -0.31
SMG7-212ENST00000507469 DGKHQ86XP1 1220 aa13.1□□□□□ -0.31
SMG7-212ENST00000507469 SLC39A2Q9NP94 309 aa13.1□□□□□ -0.31
SMG7-212ENST00000507469 MYO1AQ9UBC5 1043 aa13.1□□□□□ -0.31
SMG7-212ENST00000507469 MAGEA1P43355 309 aa13.1□□□□□ -0.31
SMG7-212ENST00000507469 DIXDC1Q155Q3 683 aa13.1□□□□□ -0.31
SMG7-212ENST00000507469 WDR24Q96S15 920 aa13.1□□□□□ -0.31
SMG7-212ENST00000507469 PHF20Q9BVI0 1012 aa13.1□□□□□ -0.31
SMG7-212ENST00000507469 IFIH1Q9BYX4 1025 aaKnown RBP13.1□□□□□ -0.31
SMG7-212ENST00000507469 DISC1Q9NRI5 854 aa13.1□□□□□ -0.31
SMG7-212ENST00000507469 TERF2Q15554 542 aa13.09□□□□□ -0.31
SMG7-212ENST00000507469 IFI16Q16666 785 aaKnown RBP13.09□□□□□ -0.31
SMG7-212ENST00000507469 RRAGAQ7L523 313 aa13.09□□□□□ -0.31
SMG7-212ENST00000507469 UIMC1Q96RL1 719 aa13.09□□□□□ -0.31
SMG7-212ENST00000507469 CUEDC2Q9H467 287 aa13.09□□□□□ -0.31
SMG7-212ENST00000507469 SRP68Q9UHB9 627 aaKnown RBP13.09□□□□□ -0.31
SMG7-212ENST00000507469 DCCP43146 1447 aa13.09□□□□□ -0.31
SMG7-212ENST00000507469 ENC1O14682 589 aa13.09□□□□□ -0.31
SMG7-212ENST00000507469 FGFR2P21802 821 aa13.09□□□□□ -0.31
SMG7-212ENST00000507469 MTF1Q14872 753 aa13.09□□□□□ -0.31
SMG7-212ENST00000507469 DHTKD1Q96HY7 919 aaPredicted RBP13.09□□□□□ -0.31
SMG7-212ENST00000507469 CNOT6LQ96LI5 555 aaKnown RBP13.09□□□□□ -0.31
SMG7-212ENST00000507469 FRMPD2Q68DX3 1309 aaPredicted RBP13.09□□□□□ -0.31
SMG7-212ENST00000507469 CCDC151A5D8V7 595 aa13.09□□□□□ -0.31
SMG7-212ENST00000507469 CAMTA2O94983 1202 aa13.09□□□□□ -0.31
SMG7-212ENST00000507469 ATP2C1P98194 919 aaPredicted RBP13.09□□□□□ -0.31
SMG7-212ENST00000507469 RAPGEF1Q13905 1077 aa13.09□□□□□ -0.31
SMG7-212ENST00000507469 SRBD1Q8N5C6 995 aaKnown RBP13.09□□□□□ -0.31
SMG7-212ENST00000507469 PSMB7Q99436 277 aa13.09□□□□□ -0.31
SMG7-212ENST00000507469 MAGEF1Q9HAY2 307 aa13.09□□□□□ -0.31
SMG7-212ENST00000507469 ADGRG1Q9Y653 693 aa13.09□□□□□ -0.31
SMG7-212ENST00000507469 TCRBV5S4A2TA0A5A2 114 aa13.08□□□□□ -0.31
SMG7-212ENST00000507469 SPDYE3A6NKU9 549 aa13.08□□□□□ -0.31
SMG7-212ENST00000507469 ACTN4O43707 911 aaKnown RBP13.08□□□□□ -0.31
SMG7-212ENST00000507469 TOB1P50616 345 aaPredicted RBP13.08□□□□□ -0.31
SMG7-212ENST00000507469 TBC1D22AQ8WUA7 517 aa13.08□□□□□ -0.31
SMG7-212ENST00000507469 ZNF622Q969S3 477 aaKnown RBP eCLIP13.08□□□□□ -0.312e-9■□□□□ 10.5
SMG7-212ENST00000507469 AK8Q96MA6 479 aa13.08□□□□□ -0.31
SMG7-212ENST00000507469 EPC1Q9H2F5 836 aa13.08□□□□□ -0.31
SMG7-212ENST00000507469 TBC1D7Q9P0N9 293 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms