RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 EPHB3P54753 998 aa5.03□□□□□ -1.6
HMGB3P15-201ENST00000507326 PCBP3P57721 371 aaKnown RBP5.03□□□□□ -1.6
HMGB3P15-201ENST00000507326 SNW1Q13573 536 aaKnown RBP5.03□□□□□ -1.6
HMGB3P15-201ENST00000507326 MLECQ14165 292 aa5.03□□□□□ -1.6
HMGB3P15-201ENST00000507326 TMEM151BQ8IW70 566 aa5.03□□□□□ -1.6
HMGB3P15-201ENST00000507326 MARCH10Q8NA82 808 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P15-201ENST00000507326 DAGLBQ8NCG7 672 aa5.03□□□□□ -1.6
HMGB3P15-201ENST00000507326 HHIPL1Q96JK4 782 aa5.03□□□□□ -1.6
HMGB3P15-201ENST00000507326 SIGLEC10Q96LC7 697 aa5.03□□□□□ -1.6
HMGB3P15-201ENST00000507326 SIRT5Q9NXA8 310 aa5.03□□□□□ -1.6
HMGB3P15-201ENST00000507326 IRAK3Q9Y616 596 aa5.03□□□□□ -1.6
HMGB3P15-201ENST00000507326 POLR2BP30876 1174 aaKnown RBP5.02□□□□□ -1.61
HMGB3P15-201ENST00000507326 VIPR1P32241 457 aa5.02□□□□□ -1.61
HMGB3P15-201ENST00000507326 TAGLNQ01995 201 aaKnown RBP5.02□□□□□ -1.61
HMGB3P15-201ENST00000507326 NBPF9Q3BBW0 867 aa5.02□□□□□ -1.61
HMGB3P15-201ENST00000507326 BBS9Q3SYG4 887 aa5.02□□□□□ -1.61
HMGB3P15-201ENST00000507326 DNAJC14Q6Y2X3 702 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P15-201ENST00000507326 FAM196AQ6ZSG2 479 aa5.02□□□□□ -1.61
HMGB3P15-201ENST00000507326 FBXO33Q7Z6M2 555 aa5.02□□□□□ -1.61
HMGB3P15-201ENST00000507326 ZNF655Q8N720 491 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P15-201ENST00000507326 BRMS1Q9HCU9 246 aa5.02□□□□□ -1.61
HMGB3P15-201ENST00000507326 MRS2Q9HD23 443 aa5.02□□□□□ -1.61
HMGB3P15-201ENST00000507326 CRTAC1Q9NQ79 661 aa5.02□□□□□ -1.61
HMGB3P15-201ENST00000507326 PCDHB14Q9Y5E9 798 aa5.02□□□□□ -1.61
HMGB3P15-201ENST00000507326 FOXD2O60548 495 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P15-201ENST00000507326 PRAMEF1O95521 474 aa5.01□□□□□ -1.61
HMGB3P15-201ENST00000507326 PNLIPP16233 465 aa5.01□□□□□ -1.61
HMGB3P15-201ENST00000507326 AFF3P51826 1226 aaKnown RBP5.01□□□□□ -1.61
HMGB3P15-201ENST00000507326 KIR3DS1Q14943 382 aa5.01□□□□□ -1.61
HMGB3P15-201ENST00000507326 CWF19L2Q2TBE0 894 aaKnown RBP5.01□□□□□ -1.61
HMGB3P15-201ENST00000507326 NBPF12Q5TAG4 269 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P15-201ENST00000507326 LINC00116Q8NCU8 138 aa5.01□□□□□ -1.61
HMGB3P15-201ENST00000507326 ZNF512BQ96KM6 892 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P15-201ENST00000507326 PLCD4Q9BRC7 762 aa5.01□□□□□ -1.61
HMGB3P15-201ENST00000507326 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.01□□□□□ -1.61
HMGB3P15-201ENST00000507326 BCL11AQ9H165 835 aa5.01□□□□□ -1.61
HMGB3P15-201ENST00000507326 CNTD2Q9H8S5 307 aa5.01□□□□□ -1.61
HMGB3P15-201ENST00000507326 COPRSQ9NQ92 184 aa5.01□□□□□ -1.61
HMGB3P15-201ENST00000507326 KBTBD4Q9NVX7 518 aa5.01□□□□□ -1.61
HMGB3P15-201ENST00000507326 MINPP1Q9UNW1 487 aa5.01□□□□□ -1.61
HMGB3P15-201ENST00000507326 HRKO00198 91 aa5□□□□□ -1.61
HMGB3P15-201ENST00000507326 N4BP3O15049 544 aa5□□□□□ -1.61
HMGB3P15-201ENST00000507326 RTP1P59025 263 aa5□□□□□ -1.61
HMGB3P15-201ENST00000507326 NFIXQ14938 502 aa5□□□□□ -1.61
HMGB3P15-201ENST00000507326 OVOS1Q6IE37 1185 aa5□□□□□ -1.61
HMGB3P15-201ENST00000507326 FBXL19Q6PCT2 694 aa5□□□□□ -1.61
HMGB3P15-201ENST00000507326 TICAM2Q86XR7 235 aa5□□□□□ -1.61
HMGB3P15-201ENST00000507326 DACT3Q96B18 629 aaPredicted RBP5□□□□□ -1.61
HMGB3P15-201ENST00000507326 PRDM14Q9GZV8 571 aa5□□□□□ -1.61
HMGB3P15-201ENST00000507326 GMIPQ9P107 970 aa5□□□□□ -1.61
HMGB3P15-201ENST00000507326 MEIS1O00470 390 aa4.99□□□□□ -1.61
HMGB3P15-201ENST00000507326 SIGLEC6O43699 453 aa4.99□□□□□ -1.61
HMGB3P15-201ENST00000507326 SASH1O94885 1247 aa4.99□□□□□ -1.61
HMGB3P15-201ENST00000507326 SYN1P17600 705 aa4.99□□□□□ -1.61
HMGB3P15-201ENST00000507326 CDR1P51861 262 aa4.99□□□□□ -1.61
HMGB3P15-201ENST00000507326 YBX1P67809 324 aaKnown RBP4.99□□□□□ -1.61
HMGB3P15-201ENST00000507326 VMACQ2NL98 169 aa4.99□□□□□ -1.61
HMGB3P15-201ENST00000507326 FCRL2Q96LA5 508 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P15-201ENST00000507326 LRRC3Q9BY71 257 aa4.99□□□□□ -1.61
HMGB3P15-201ENST00000507326 EPB41L4AQ9HCS5 686 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P15-201ENST00000507326 RTEL1Q9NZ71 1219 aa4.99□□□□□ -1.61
HMGB3P15-201ENST00000507326 GPR55Q9Y2T6 319 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P15-201ENST00000507326 OTOL1A6NHN0 477 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P15-201ENST00000507326 FADS2P1A8MWK0 482 aa4.98□□□□□ -1.61
HMGB3P15-201ENST00000507326 CLEC3AO75596 197 aa4.98□□□□□ -1.61
HMGB3P15-201ENST00000507326 ERVFRD-1P60508 538 aa4.98□□□□□ -1.61
HMGB3P15-201ENST00000507326 HSF5Q4G112 596 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P15-201ENST00000507326 GALNT18Q6P9A2 607 aa4.98□□□□□ -1.61
HMGB3P15-201ENST00000507326 ERMP1Q7Z2K6 904 aa4.98□□□□□ -1.61
HMGB3P15-201ENST00000507326 FEZF2Q8TBJ5 459 aa4.98□□□□□ -1.61
HMGB3P15-201ENST00000507326 ATG4CQ96DT6 458 aa4.98□□□□□ -1.61
HMGB3P15-201ENST00000507326 DRC1Q96MC2 740 aa4.98□□□□□ -1.61
HMGB3P15-201ENST00000507326 XYLT2Q9H1B5 865 aa4.98□□□□□ -1.61
HMGB3P15-201ENST00000507326 CNNM2Q9H8M5 875 aa4.98□□□□□ -1.61
HMGB3P15-201ENST00000507326 CHST7Q9NS84 486 aa4.98□□□□□ -1.61
HMGB3P15-201ENST00000507326 TNFRSF10DQ9UBN6 386 aa4.98□□□□□ -1.61
HMGB3P15-201ENST00000507326 SUPT16HQ9Y5B9 1047 aaKnown RBP4.98□□□□□ -1.61
HMGB3P15-201ENST00000507326 TAF6LQ9Y6J9 622 aa4.98□□□□□ -1.61
HMGB3P15-201ENST00000507326 ROBO2Q9HCK4 1378 aa4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 WTIPA6NIX2 430 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 ABLIM1O14639 778 aa4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 IRS4O14654 1257 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 ATE1O95260 518 aa4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 MPOP05164 745 aa4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 ERCC3P19447 782 aa4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 EIF4A3P38919 411 aaKnown RBP4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 CRKP46108 304 aa4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 RAD51AP2Q09MP3 1159 aa4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 RAB3GAP1Q15042 981 aa4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 CDCP2Q5VXM1 449 aa4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 OLFML2BQ68BL8 750 aa4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 CNKSR3Q6P9H4 555 aa4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 TMC6Q7Z403 805 aa4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 TMEFF1Q8IYR6 380 aa4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 ZDHHC14Q8IZN3 488 aa4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 MZB1Q8WU39 189 aa4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 SPATA32Q96LK8 384 aa4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 CDADC1Q9BWV3 514 aa4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 GFOD1Q9NXC2 390 aa4.97□□□□□ -1.61
HMGB3P15-201ENST00000507326 KLHL14Q9P2G3 628 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms