RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 IFIT3O14879 490 aaKnown RBP23.29■■□□□ 1.32
DDR1-259ENST00000507046 ADCY3O60266 1144 aa23.29■■□□□ 1.32
DDR1-259ENST00000507046 ERCC3P19447 782 aa23.29■■□□□ 1.32
DDR1-259ENST00000507046 STAT3P40763 770 aa23.29■■□□□ 1.32
DDR1-259ENST00000507046 IFFO2Q5TF58 517 aa23.29■■□□□ 1.32
DDR1-259ENST00000507046 RIOX2Q8IUF8 465 aa23.29■■□□□ 1.32
DDR1-259ENST00000507046 MB21D2Q8IYB1 491 aaPredicted RBP23.29■■□□□ 1.32
DDR1-259ENST00000507046 REPS2Q8NFH8 660 aa23.29■■□□□ 1.32
DDR1-259ENST00000507046 TEX13BQ9BXU2 312 aa23.29■■□□□ 1.32
DDR1-259ENST00000507046 SLC38A10Q9HBR0 1119 aa23.29■■□□□ 1.32
DDR1-259ENST00000507046 GJD2Q9UKL4 321 aa23.29■■□□□ 1.32
DDR1-259ENST00000507046 ZNF214Q9UL59 606 aaPredicted RBP23.29■■□□□ 1.32
DDR1-259ENST00000507046 FRMPD2Q68DX3 1309 aaPredicted RBP23.29■■□□□ 1.32
DDR1-259ENST00000507046 SNHG28P0DPA3 235 aa23.28■■□□□ 1.32
DDR1-259ENST00000507046 ZKSCAN1P17029 563 aaPredicted RBP23.28■■□□□ 1.32
DDR1-259ENST00000507046 RGS2P41220 211 aa23.28■■□□□ 1.32
DDR1-259ENST00000507046 PXYLP1Q8TE99 480 aa23.28■■□□□ 1.32
DDR1-259ENST00000507046 SH3TC2Q8TF17 1288 aa23.28■■□□□ 1.32
DDR1-259ENST00000507046 SLC15A5A6NIM6 579 aa23.27■■□□□ 1.32
DDR1-259ENST00000507046 ATP2A1O14983 1001 aa23.27■■□□□ 1.32
DDR1-259ENST00000507046 PTPREP23469 700 aa23.27■■□□□ 1.32
DDR1-259ENST00000507046 OAZ1P54368 228 aa23.27■■□□□ 1.32
DDR1-259ENST00000507046 ZNF543Q08ER8 600 aa23.27■■□□□ 1.32
DDR1-259ENST00000507046 WTAPQ15007 396 aa23.27■■□□□ 1.32
DDR1-259ENST00000507046 SEC23AQ15436 765 aa23.27■■□□□ 1.32
DDR1-259ENST00000507046 MORN1Q5T089 497 aa23.27■■□□□ 1.32
DDR1-259ENST00000507046 GPATCH4Q5T3I0 446 aaKnown RBP23.27■■□□□ 1.32
DDR1-259ENST00000507046 SNRNP48Q6IEG0 339 aaKnown RBP23.27■■□□□ 1.32
DDR1-259ENST00000507046 CPXCR1Q8N123 301 aa23.27■■□□□ 1.32
DDR1-259ENST00000507046 ZNF333Q96JL9 665 aa23.27■■□□□ 1.32
DDR1-259ENST00000507046 GPCPD1Q9NPB8 672 aa23.27■■□□□ 1.32
DDR1-259ENST00000507046 BIN2Q9UBW5 565 aaPredicted RBP23.27■■□□□ 1.32
DDR1-259ENST00000507046 DOCK3Q8IZD9 2030 aa23.26■■□□□ 1.31
DDR1-259ENST00000507046 PLXNB2O15031 1838 aa23.26■■□□□ 1.31
DDR1-259ENST00000507046 STRNO43815 780 aa23.26■■□□□ 1.31
DDR1-259ENST00000507046 CYP2B6P20813 491 aa23.26■■□□□ 1.31
DDR1-259ENST00000507046 MCM5P33992 734 aa23.26■■□□□ 1.31
DDR1-259ENST00000507046 UBXN2AP68543 259 aa23.26■■□□□ 1.31
DDR1-259ENST00000507046 GRB14Q14449 540 aa23.26■■□□□ 1.31
DDR1-259ENST00000507046 BTNL9Q6UXG8 535 aa23.26■■□□□ 1.31
DDR1-259ENST00000507046 APBA2Q99767 749 aa23.26■■□□□ 1.31
DDR1-259ENST00000507046 MTA3Q9BTC8 594 aa23.26■■□□□ 1.31
DDR1-259ENST00000507046 PRR12Q9ULL5 1215 aa23.26■■□□□ 1.31
DDR1-259ENST00000507046 ZNF236Q9UL36 1845 aa23.26■■□□□ 1.31
DDR1-259ENST00000507046 ANTXR2P58335 489 aa23.25■■□□□ 1.31
DDR1-259ENST00000507046 MAP2K5Q13163 448 aa23.25■■□□□ 1.31
DDR1-259ENST00000507046 KRT32Q14532 448 aa23.25■■□□□ 1.31
DDR1-259ENST00000507046 ASPRV1Q53RT3 343 aa23.25■■□□□ 1.31
DDR1-259ENST00000507046 TMEM67Q5HYA8 995 aa23.25■■□□□ 1.31
DDR1-259ENST00000507046 SYDE2Q5VT97 1194 aa23.25■■□□□ 1.31
DDR1-259ENST00000507046 CHST3Q7LGC8 479 aa23.25■■□□□ 1.31
DDR1-259ENST00000507046 TRMT44Q8IYL2 757 aaKnown RBP23.25■■□□□ 1.31
DDR1-259ENST00000507046 RAVER2Q9HCJ3 691 aaKnown RBP23.25■■□□□ 1.31
DDR1-259ENST00000507046 EPB41L2O43491 1005 aaKnown RBP23.24■■□□□ 1.31
DDR1-259ENST00000507046 PRC1O43663 620 aa23.24■■□□□ 1.31
DDR1-259ENST00000507046 FCER1AP12319 257 aa23.24■■□□□ 1.31
DDR1-259ENST00000507046 XRCC5P13010 732 aaKnown RBP23.24■■□□□ 1.31
DDR1-259ENST00000507046 ELNP15502 786 aa23.24■■□□□ 1.31
DDR1-259ENST00000507046 SLC16A2P36021 539 aa23.24■■□□□ 1.31
DDR1-259ENST00000507046 TTBK2Q6IQ55 1244 aa23.24■■□□□ 1.31
DDR1-259ENST00000507046 ABRAQ8N0Z2 381 aa23.24■■□□□ 1.31
DDR1-259ENST00000507046 USP6NLQ92738 828 aa23.24■■□□□ 1.31
DDR1-259ENST00000507046 HTTP42858 3142 aa23.23■■□□□ 1.31
DDR1-259ENST00000507046 PARP1P09874 1014 aaKnown RBP23.23■■□□□ 1.31
DDR1-259ENST00000507046 SLC4A3P48751 1232 aa23.23■■□□□ 1.31
DDR1-259ENST00000507046 TSGA10IPQ3SY00 556 aa23.23■■□□□ 1.31
DDR1-259ENST00000507046 TMEM87BQ96K49 555 aa23.23■■□□□ 1.31
DDR1-259ENST00000507046 NEK1Q96PY6 1258 aa23.23■■□□□ 1.31
DDR1-259ENST00000507046 MMP19Q99542 508 aa23.23■■□□□ 1.31
DDR1-259ENST00000507046 HMGCRP04035 888 aa23.22■■□□□ 1.31
DDR1-259ENST00000507046 GOLGA8HP0CJ92 632 aa23.22■■□□□ 1.31
DDR1-259ENST00000507046 ADORA2AP29274 412 aa23.22■■□□□ 1.31
DDR1-259ENST00000507046 HSPA4P34932 840 aa23.22■■□□□ 1.31
DDR1-259ENST00000507046 KCTD2Q14681 263 aa23.22■■□□□ 1.31
DDR1-259ENST00000507046 CCDC174Q6PII3 467 aa23.22■■□□□ 1.31
DDR1-259ENST00000507046 DPP9Q86TI2 863 aa23.22■■□□□ 1.31
DDR1-259ENST00000507046 TMEM106CQ9BVX2 250 aa23.22■■□□□ 1.31
DDR1-259ENST00000507046 RANBP17Q9H2T7 1088 aaKnown RBP23.22■■□□□ 1.31
DDR1-259ENST00000507046 SLC5A4Q9NY91 659 aa23.22■■□□□ 1.31
DDR1-259ENST00000507046 FBXO40Q9UH90 709 aa23.22■■□□□ 1.31
DDR1-259ENST00000507046 INHAP05111 366 aa23.21■■□□□ 1.31
DDR1-259ENST00000507046 CATIPQ7Z7H3 387 aa23.21■■□□□ 1.31
DDR1-259ENST00000507046 RASEFQ8IZ41 740 aa23.21■■□□□ 1.31
DDR1-259ENST00000507046 IGDCC4Q8TDY8 1250 aa23.21■■□□□ 1.31
DDR1-259ENST00000507046 MYCP01106 439 aaPredicted RBP23.2■■□□□ 1.3
DDR1-259ENST00000507046 HOXC6P09630 235 aa23.2■■□□□ 1.3
DDR1-259ENST00000507046 SOX10P56693 466 aa23.2■■□□□ 1.3
DDR1-259ENST00000507046 TKFCQ3LXA3 575 aa23.2■■□□□ 1.3
DDR1-259ENST00000507046 TMTC2Q8N394 836 aa23.2■■□□□ 1.3
DDR1-259ENST00000507046 CHST13Q8NET6 341 aa23.2■■□□□ 1.3
DDR1-259ENST00000507046 TRIB2Q92519 343 aa23.2■■□□□ 1.3
DDR1-259ENST00000507046 LY9Q9HBG7 655 aa23.2■■□□□ 1.3
DDR1-259ENST00000507046 PNMA2Q9UL42 364 aa23.2■■□□□ 1.3
DDR1-259ENST00000507046 RIPK3Q9Y572 518 aa23.2■■□□□ 1.3
DDR1-259ENST00000507046 ZNF536O15090 1300 aa23.19■■□□□ 1.3
DDR1-259ENST00000507046 WDR19Q8NEZ3 1342 aa23.19■■□□□ 1.3
DDR1-259ENST00000507046 SH2B2O14492 632 aaPredicted RBP23.19■■□□□ 1.3
DDR1-259ENST00000507046 EIF5BO60841 1220 aaKnown RBP23.19■■□□□ 1.3
DDR1-259ENST00000507046 HMGB1P09429 215 aaKnown RBP23.19■■□□□ 1.3
DDR1-259ENST00000507046 SNAP25P60880 206 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms