RNA–Protein interactions for RNA: ENST00000506734.5

SMN2-206, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 1,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-206ENST00000506734 HOMER1Q86YM7 354 aa21.22■□□□□ 0.99
SMN2-206ENST00000506734 TEPSINQ96N21 525 aa21.22■□□□□ 0.99
SMN2-206ENST00000506734 ZBTB21Q9ULJ3 1066 aa21.22■□□□□ 0.99
SMN2-206ENST00000506734 PCDHB6Q9Y5E3 794 aa21.22■□□□□ 0.99
SMN2-206ENST00000506734 FAM205CA6NFA0 338 aa21.21■□□□□ 0.99
SMN2-206ENST00000506734 TRIM75PA6NK02 468 aa21.21■□□□□ 0.99
SMN2-206ENST00000506734 H7C1D1 291 aa21.21■□□□□ 0.99
SMN2-206ENST00000506734 CUTAO60888 179 aa21.21■□□□□ 0.99
SMN2-206ENST00000506734 BMP15O95972 392 aa21.21■□□□□ 0.99
SMN2-206ENST00000506734 MARCKSP29966 332 aaPredicted RBP21.21■□□□□ 0.99
SMN2-206ENST00000506734 ADGRF4Q8IZF3 695 aa21.21■□□□□ 0.99
SMN2-206ENST00000506734 TSPY26PQ9H489 355 aa21.21■□□□□ 0.99
SMN2-206ENST00000506734 JMJD4Q9H9V9 463 aa21.21■□□□□ 0.99
SMN2-206ENST00000506734 VAT1LQ9HCJ6 419 aa21.21■□□□□ 0.99
SMN2-206ENST00000506734 PNMA6FA0A0J9YX94 578 aa21.2■□□□□ 0.98
SMN2-206ENST00000506734 FAM237AA0A1B0GTK4 181 aa21.2■□□□□ 0.98
SMN2-206ENST00000506734 F5H6K3 240 aa21.2■□□□□ 0.98
SMN2-206ENST00000506734 SLC1A4P43007 532 aa21.2■□□□□ 0.98
SMN2-206ENST00000506734 NAPAP54920 295 aa21.2■□□□□ 0.98
SMN2-206ENST00000506734 KLRC3Q07444 240 aa21.2■□□□□ 0.98
SMN2-206ENST00000506734 PPP1R18Q6NYC8 613 aa21.2■□□□□ 0.98
SMN2-206ENST00000506734 FMR1NBQ8N0W7 255 aaPredicted RBP21.2■□□□□ 0.98
SMN2-206ENST00000506734 GPRC5DQ9NZD1 345 aa21.2■□□□□ 0.98
SMN2-206ENST00000506734 HACL1Q9UJ83 578 aa21.2■□□□□ 0.98
SMN2-206ENST00000506734 XRCC6P12956 609 aaKnown RBP eCLIP21.19■□□□□ 0.98
SMN2-206ENST00000506734 CAP2P40123 477 aa21.19■□□□□ 0.98
SMN2-206ENST00000506734 MAP3K11Q16584 847 aa21.19■□□□□ 0.98
SMN2-206ENST00000506734 TTBK2Q6IQ55 1244 aa21.19■□□□□ 0.98
SMN2-206ENST00000506734 PIK3AP1Q6ZUJ8 805 aa21.19■□□□□ 0.98
SMN2-206ENST00000506734 KCTD1Q719H9 257 aa21.19■□□□□ 0.98
SMN2-206ENST00000506734 KRI1Q8N9T8 703 aaKnown RBP21.19■□□□□ 0.98
SMN2-206ENST00000506734 FUCA2Q9BTY2 467 aa21.19■□□□□ 0.98
SMN2-206ENST00000506734 TNMDQ9H2S6 317 aa21.19■□□□□ 0.98
SMN2-206ENST00000506734 ARHGEF10LQ9HCE6 1279 aa21.19■□□□□ 0.98
SMN2-206ENST00000506734 C6orf50Q9HD87 102 aa21.19■□□□□ 0.98
SMN2-206ENST00000506734 A0A1W2PRG0 241 aa21.19■□□□□ 0.98
SMN2-206ENST00000506734 ADAMTS3O15072 1205 aa21.19■□□□□ 0.98
SMN2-206ENST00000506734 NDUFB10O96000 172 aa21.19■□□□□ 0.98
SMN2-206ENST00000506734 PTPREP23469 700 aa21.19■□□□□ 0.98
SMN2-206ENST00000506734 GNA11P29992 359 aa21.19■□□□□ 0.98
SMN2-206ENST00000506734 NOM1Q5C9Z4 860 aaKnown RBP21.19■□□□□ 0.98
SMN2-206ENST00000506734 MIGA2Q7L4E1 593 aa21.19■□□□□ 0.98
SMN2-206ENST00000506734 PCDHA6Q9UN73 950 aa21.19■□□□□ 0.98
SMN2-206ENST00000506734 TMX2Q9Y320 296 aa21.19■□□□□ 0.98
SMN2-206ENST00000506734 PCDHA8Q9Y5H6 950 aa21.19■□□□□ 0.98
SMN2-206ENST00000506734 ZBTB5O15062 677 aa21.18■□□□□ 0.98
SMN2-206ENST00000506734 CTAGE5O15320 804 aa21.18■□□□□ 0.98
SMN2-206ENST00000506734 NDUFA8P51970 172 aa21.18■□□□□ 0.98
SMN2-206ENST00000506734 TTC38Q5R3I4 469 aa21.18■□□□□ 0.98
SMN2-206ENST00000506734 RESP18Q5W5W9 173 aa21.18■□□□□ 0.98
SMN2-206ENST00000506734 GINM1Q9NU53 330 aa21.18■□□□□ 0.98
SMN2-206ENST00000506734 FBXO2Q9UK22 296 aaPredicted RBP21.18■□□□□ 0.98
SMN2-206ENST00000506734 SRPRBQ9Y5M8 271 aaKnown RBP21.18■□□□□ 0.98
SMN2-206ENST00000506734 ASTN2O75129 1339 aaPredicted RBP21.17■□□□□ 0.98
SMN2-206ENST00000506734 A0A1B0GVL5 298 aa21.17■□□□□ 0.98
SMN2-206ENST00000506734 SMCO2A6NFE2 343 aa21.17■□□□□ 0.98
SMN2-206ENST00000506734 PHF20L1A8MW92 1017 aa21.17■□□□□ 0.98
SMN2-206ENST00000506734 KINO60870 393 aaKnown RBP21.17■□□□□ 0.98
SMN2-206ENST00000506734 SHC4Q6S5L8 630 aa21.17■□□□□ 0.98
SMN2-206ENST00000506734 APOBEC3FQ8IUX4 373 aaKnown RBP21.17■□□□□ 0.98
SMN2-206ENST00000506734 ZNF579Q8NAF0 562 aaKnown RBP21.17■□□□□ 0.98
SMN2-206ENST00000506734 RBSNQ9H1K0 784 aa21.17■□□□□ 0.98
SMN2-206ENST00000506734 HPSEQ9Y251 543 aa21.17■□□□□ 0.98
SMN2-206ENST00000506734 ASNSP08243 561 aa21.16■□□□□ 0.98
SMN2-206ENST00000506734 PFKFB1P16118 471 aa21.16■□□□□ 0.98
SMN2-206ENST00000506734 SLC16A2P36021 539 aa21.16■□□□□ 0.98
SMN2-206ENST00000506734 CAMK4Q16566 473 aa21.16■□□□□ 0.98
SMN2-206ENST00000506734 BTNL9Q6UXG8 535 aa21.16■□□□□ 0.98
SMN2-206ENST00000506734 DEFB129Q9H1M3 183 aa21.16■□□□□ 0.98
SMN2-206ENST00000506734 CCDC194A0A1B0GVG4 234 aa21.15■□□□□ 0.98
SMN2-206ENST00000506734 USP17L10C9JJH3 530 aa21.15■□□□□ 0.98
SMN2-206ENST00000506734 BMP3P12645 472 aa21.15■□□□□ 0.98
SMN2-206ENST00000506734 ATP2B1P20020 1258 aa21.15■□□□□ 0.98
SMN2-206ENST00000506734 KRT25Q7Z3Z0 450 aa21.15■□□□□ 0.98
SMN2-206ENST00000506734 SH2D4AQ9H788 454 aa21.15■□□□□ 0.98
SMN2-206ENST00000506734 GOPCQ9HD26 462 aa21.15■□□□□ 0.98
SMN2-206ENST00000506734 ATAD5Q96QE3 1844 aa21.15■□□□□ 0.98
SMN2-206ENST00000506734 WNT7AO00755 349 aa21.14■□□□□ 0.98
SMN2-206ENST00000506734 RAD21O60216 631 aa21.14■□□□□ 0.98
SMN2-206ENST00000506734 PPP1R11O60927 126 aaPredicted RBP21.14■□□□□ 0.98
SMN2-206ENST00000506734 YBX3P16989 372 aaKnown RBP eCLIP21.14■□□□□ 0.98
SMN2-206ENST00000506734 TRPM4Q8TD43 1214 aa21.14■□□□□ 0.98
SMN2-206ENST00000506734 RASGRP4Q8TDF6 673 aa21.14■□□□□ 0.98
SMN2-206ENST00000506734 ACER1Q8TDN7 264 aa21.14■□□□□ 0.98
SMN2-206ENST00000506734 CLIC6Q96NY7 704 aa21.14■□□□□ 0.98
SMN2-206ENST00000506734 UTRNP46939 3433 aa21.14■□□□□ 0.97
SMN2-206ENST00000506734 CCDC192P0DO97 292 aa21.14■□□□□ 0.97
SMN2-206ENST00000506734 ECE1P42892 770 aa21.14■□□□□ 0.97
SMN2-206ENST00000506734 ATP2C1P98194 919 aaPredicted RBP21.14■□□□□ 0.97
SMN2-206ENST00000506734 FERMT2Q96AC1 680 aa21.14■□□□□ 0.97
SMN2-206ENST00000506734 COA7Q96BR5 231 aa21.14■□□□□ 0.97
SMN2-206ENST00000506734 HOOK2Q96ED9 719 aa21.14■□□□□ 0.97
SMN2-206ENST00000506734 TIGD1Q96MW7 591 aa21.14■□□□□ 0.97
SMN2-206ENST00000506734 SCAF8Q9UPN6 1271 aaKnown RBP21.14■□□□□ 0.97
SMN2-206ENST00000506734 ADCY7P51828 1080 aa21.13■□□□□ 0.97
SMN2-206ENST00000506734 ZNF174Q15697 407 aa21.13■□□□□ 0.97
SMN2-206ENST00000506734 RNF181Q9P0P0 153 aa21.13■□□□□ 0.97
SMN2-206ENST00000506734 PPP2R3BQ9Y5P8 575 aa21.13■□□□□ 0.97
SMN2-206ENST00000506734 CTNND1O60716 968 aaKnown RBP21.12■□□□□ 0.97
SMN2-206ENST00000506734 ZNF202O95125 648 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms