RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 FKBP4Q02790 459 aaKnown RBP eCLIP17.79■□□□□ 0.44
SCLT1-208ENST00000506368 PAK1Q13153 545 aa17.79■□□□□ 0.44
SCLT1-208ENST00000506368 PPP2R5BQ15173 497 aa17.79■□□□□ 0.44
SCLT1-208ENST00000506368 MEA1Q16626 185 aa17.79■□□□□ 0.44
SCLT1-208ENST00000506368 KIAA1328Q86T90 577 aa17.79■□□□□ 0.44
SCLT1-208ENST00000506368 PURBQ96QR8 312 aaKnown RBP17.79■□□□□ 0.44
SCLT1-208ENST00000506368 CNNM2Q9H8M5 875 aa17.79■□□□□ 0.44
SCLT1-208ENST00000506368 LY9Q9HBG7 655 aa17.79■□□□□ 0.44
SCLT1-208ENST00000506368 FAM217BQ9NTX9 383 aaPredicted RBP17.79■□□□□ 0.44
SCLT1-208ENST00000506368 CAPN11Q9UMQ6 739 aa17.79■□□□□ 0.44
SCLT1-208ENST00000506368 TRIM37O94972 964 aa17.78■□□□□ 0.44
SCLT1-208ENST00000506368 ABL1P00519 1130 aa17.78■□□□□ 0.44
SCLT1-208ENST00000506368 ALX1Q15699 326 aa17.78■□□□□ 0.44
SCLT1-208ENST00000506368 KDM7AQ6ZMT4 941 aa17.78■□□□□ 0.44
SCLT1-208ENST00000506368 CYB5R4Q7L1T6 521 aa17.78■□□□□ 0.44
SCLT1-208ENST00000506368 TAX1BP1Q86VP1 789 aa17.78■□□□□ 0.44
SCLT1-208ENST00000506368 MAGEC3Q8TD91 643 aa17.78■□□□□ 0.44
SCLT1-208ENST00000506368 DCAF5Q96JK2 942 aa17.78■□□□□ 0.44
SCLT1-208ENST00000506368 ACTR5Q9H9F9 607 aaPredicted RBP17.78■□□□□ 0.44
SCLT1-208ENST00000506368 KCNJ18B7U540 433 aa17.78■□□□□ 0.44
SCLT1-208ENST00000506368 XBP1P17861 261 aa17.78■□□□□ 0.44
SCLT1-208ENST00000506368 EEF1GP26641 437 aaKnown RBP17.78■□□□□ 0.44
SCLT1-208ENST00000506368 STX17P56962 302 aa17.78■□□□□ 0.44
SCLT1-208ENST00000506368 CDK17Q00537 523 aa17.78■□□□□ 0.44
SCLT1-208ENST00000506368 GRIN1Q05586 938 aa17.78■□□□□ 0.44
SCLT1-208ENST00000506368 KCNJ12Q14500 433 aa17.78■□□□□ 0.44
SCLT1-208ENST00000506368 PREPLQ4J6C6 727 aaPredicted RBP17.78■□□□□ 0.44
SCLT1-208ENST00000506368 SND1Q7KZF4 910 aaKnown RBP eCLIP17.78■□□□□ 0.44
SCLT1-208ENST00000506368 GRAMD1CQ8IYS0 662 aa17.78■□□□□ 0.44
SCLT1-208ENST00000506368 CCDC155Q8N6L0 562 aa17.78■□□□□ 0.44
SCLT1-208ENST00000506368 TRIM58Q8NG06 486 aa17.78■□□□□ 0.44
SCLT1-208ENST00000506368 TRIM75PA6NK02 468 aa17.77■□□□□ 0.44
SCLT1-208ENST00000506368 CALRP27797 417 aaKnown RBP17.77■□□□□ 0.44
SCLT1-208ENST00000506368 TMEM67Q5HYA8 995 aa17.77■□□□□ 0.44
SCLT1-208ENST00000506368 FAM196AQ6ZSG2 479 aa17.77■□□□□ 0.44
SCLT1-208ENST00000506368 TMTC2Q8N394 836 aa17.77■□□□□ 0.44
SCLT1-208ENST00000506368 CEP120Q8N960 986 aa17.77■□□□□ 0.44
SCLT1-208ENST00000506368 ZNF512BQ96KM6 892 aaPredicted RBP17.77■□□□□ 0.44
SCLT1-208ENST00000506368 PUS7LQ9H0K6 701 aaKnown RBP17.77■□□□□ 0.44
SCLT1-208ENST00000506368 EPN3Q9H201 632 aa17.77■□□□□ 0.44
SCLT1-208ENST00000506368 CWC25Q9NXE8 425 aaPredicted RBP17.77■□□□□ 0.44
SCLT1-208ENST00000506368 CTNND2Q9UQB3 1225 aa17.77■□□□□ 0.44
SCLT1-208ENST00000506368 PCDHB6Q9Y5E3 794 aa17.77■□□□□ 0.44
SCLT1-208ENST00000506368 ERCC3P19447 782 aa17.76■□□□□ 0.43
SCLT1-208ENST00000506368 CCT6AP40227 531 aaKnown RBP17.76■□□□□ 0.43
SCLT1-208ENST00000506368 HERVK_113P62684 666 aa17.76■□□□□ 0.43
SCLT1-208ENST00000506368 UBE3CQ15386 1083 aa17.76■□□□□ 0.43
SCLT1-208ENST00000506368 VCPKMTQ9H867 229 aa17.76■□□□□ 0.43
SCLT1-208ENST00000506368 ENC1O14682 589 aa17.76■□□□□ 0.43
SCLT1-208ENST00000506368 TCP1P17987 556 aaKnown RBP17.76■□□□□ 0.43
SCLT1-208ENST00000506368 UBXN1Q04323 297 aa17.76■□□□□ 0.43
SCLT1-208ENST00000506368 WLSQ5T9L3 541 aa17.76■□□□□ 0.43
SCLT1-208ENST00000506368 ZNF658Q5TYW1 1059 aaPredicted RBP17.76■□□□□ 0.43
SCLT1-208ENST00000506368 TBC1D10CQ8IV04 446 aa17.76■□□□□ 0.43
SCLT1-208ENST00000506368 TIAM2Q8IVF5 1701 aa17.76■□□□□ 0.43
SCLT1-208ENST00000506368 CD302Q8IX05 232 aa17.76■□□□□ 0.43
SCLT1-208ENST00000506368 NOC3LQ8WTT2 800 aaKnown RBP17.76■□□□□ 0.43
SCLT1-208ENST00000506368 CHP1Q99653 195 aa17.76■□□□□ 0.43
SCLT1-208ENST00000506368 KRT23Q9C075 422 aa17.76■□□□□ 0.43
SCLT1-208ENST00000506368 SEC31BQ9NQW1 1179 aa17.76■□□□□ 0.43
SCLT1-208ENST00000506368 HDAC6Q9UBN7 1215 aa17.76■□□□□ 0.43
SCLT1-208ENST00000506368 TJP1Q07157 1748 aa17.75■□□□□ 0.43
SCLT1-208ENST00000506368 GOLGA6L7A0A1B0GV03 622 aa17.75■□□□□ 0.43
SCLT1-208ENST00000506368 LGALS16A8MUM7 142 aa17.75■□□□□ 0.43
SCLT1-208ENST00000506368 GTPBP6O43824 516 aaPredicted RBP17.75■□□□□ 0.43
SCLT1-208ENST00000506368 MYBL2P10244 700 aa17.75■□□□□ 0.43
SCLT1-208ENST00000506368 IDEP14735 1019 aa17.75■□□□□ 0.43
SCLT1-208ENST00000506368 MB21D1Q8N884 522 aa17.75■□□□□ 0.43
SCLT1-208ENST00000506368 VPS16Q9H269 839 aa17.75■□□□□ 0.43
SCLT1-208ENST00000506368 SNX12Q9UMY4 172 aa17.75■□□□□ 0.43
SCLT1-208ENST00000506368 NF2P35240 595 aa17.75■□□□□ 0.43
SCLT1-208ENST00000506368 ADD2P35612 726 aa17.75■□□□□ 0.43
SCLT1-208ENST00000506368 TDO2P48775 406 aa17.75■□□□□ 0.43
SCLT1-208ENST00000506368 CDR1P51861 262 aa17.75■□□□□ 0.43
SCLT1-208ENST00000506368 KIF5AQ12840 1032 aa17.75■□□□□ 0.43
SCLT1-208ENST00000506368 TTC5Q8N0Z6 440 aa17.75■□□□□ 0.43
SCLT1-208ENST00000506368 PIGBQ92521 554 aa17.75■□□□□ 0.43
SCLT1-208ENST00000506368 RNF14Q9UBS8 474 aa17.75■□□□□ 0.43
SCLT1-208ENST00000506368 MCM8Q9UJA3 840 aa17.75■□□□□ 0.43
SCLT1-208ENST00000506368 NHSQ6T4R5 1651 aa17.74■□□□□ 0.43
SCLT1-208ENST00000506368 USO1O60763 962 aaKnown RBP17.74■□□□□ 0.43
SCLT1-208ENST00000506368 ELF1P32519 619 aa17.74■□□□□ 0.43
SCLT1-208ENST00000506368 AFMP43652 599 aa17.74■□□□□ 0.43
SCLT1-208ENST00000506368 DNM2P50570 870 aa17.74■□□□□ 0.43
SCLT1-208ENST00000506368 NAP1L1P55209 391 aaKnown RBP17.74■□□□□ 0.43
SCLT1-208ENST00000506368 CABP4P57796 275 aa17.74■□□□□ 0.43
SCLT1-208ENST00000506368 ACTN3Q08043 901 aaPredicted RBP17.74■□□□□ 0.43
SCLT1-208ENST00000506368 RTN1Q16799 776 aa17.74■□□□□ 0.43
SCLT1-208ENST00000506368 RRAGBQ5VZM2 374 aa17.74■□□□□ 0.43
SCLT1-208ENST00000506368 MREGQ8N565 214 aa17.74■□□□□ 0.43
SCLT1-208ENST00000506368 ARFGAP2Q8N6H7 521 aa17.74■□□□□ 0.43
SCLT1-208ENST00000506368 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.74■□□□□ 0.43
SCLT1-208ENST00000506368 CAPZA3Q96KX2 299 aa17.74■□□□□ 0.43
SCLT1-208ENST00000506368 JPH2Q9BR39 696 aaPredicted RBP17.74■□□□□ 0.43
SCLT1-208ENST00000506368 BTAF1O14981 1849 aa17.74■□□□□ 0.43
SCLT1-208ENST00000506368 TTC26A0AVF1 554 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 TACC1O75410 805 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 VAV2P52735 878 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 SATB1Q01826 763 aa17.73■□□□□ 0.43
SCLT1-208ENST00000506368 ZKSCAN4Q969J2 545 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms