RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 RIOX2Q8IUF8 465 aa19.58■□□□□ 0.72
SNCA-209ENST00000506244 ENAHQ8N8S7 591 aaPredicted RBP19.58■□□□□ 0.72
SNCA-209ENST00000506244 SH3TC2Q8TF17 1288 aa19.58■□□□□ 0.72
SNCA-209ENST00000506244 ANKS1AQ92625 1134 aa19.58■□□□□ 0.72
SNCA-209ENST00000506244 GJD2Q9UKL4 321 aa19.58■□□□□ 0.72
SNCA-209ENST00000506244 ZNF214Q9UL59 606 aaPredicted RBP19.58■□□□□ 0.72
SNCA-209ENST00000506244 PLXNB2O15031 1838 aa19.58■□□□□ 0.72
SNCA-209ENST00000506244 DOCK3Q8IZD9 2030 aa19.58■□□□□ 0.72
SNCA-209ENST00000506244 ATP2A1O14983 1001 aa19.57■□□□□ 0.72
SNCA-209ENST00000506244 PDHBP11177 359 aa19.57■□□□□ 0.72
SNCA-209ENST00000506244 XRCC5P13010 732 aaKnown RBP19.57■□□□□ 0.72
SNCA-209ENST00000506244 STAT3P40763 770 aa19.57■□□□□ 0.72
SNCA-209ENST00000506244 GRB14Q14449 540 aa19.57■□□□□ 0.72
SNCA-209ENST00000506244 MORN1Q5T089 497 aa19.57■□□□□ 0.72
SNCA-209ENST00000506244 GPATCH4Q5T3I0 446 aaKnown RBP19.57■□□□□ 0.72
SNCA-209ENST00000506244 IFIT1BQ5T764 474 aaKnown RBP19.57■□□□□ 0.72
SNCA-209ENST00000506244 KCTD1Q719H9 257 aa19.57■□□□□ 0.72
SNCA-209ENST00000506244 ABRAQ8N0Z2 381 aa19.57■□□□□ 0.72
SNCA-209ENST00000506244 PNMA1Q8ND90 353 aa19.57■□□□□ 0.72
SNCA-209ENST00000506244 REPS2Q8NFH8 660 aa19.57■□□□□ 0.72
SNCA-209ENST00000506244 SLC38A10Q9HBR0 1119 aa19.57■□□□□ 0.72
SNCA-209ENST00000506244 SLC5A4Q9NY91 659 aa19.57■□□□□ 0.72
SNCA-209ENST00000506244 SLC27A2O14975 620 aa19.56■□□□□ 0.72
SNCA-209ENST00000506244 REC8O95072 547 aa19.56■□□□□ 0.72
SNCA-209ENST00000506244 HMGCRP04035 888 aa19.56■□□□□ 0.72
SNCA-209ENST00000506244 SNHG28P0DPA3 235 aa19.56■□□□□ 0.72
SNCA-209ENST00000506244 PTPREP23469 700 aa19.56■□□□□ 0.72
SNCA-209ENST00000506244 MAP2K5Q13163 448 aa19.56■□□□□ 0.72
SNCA-209ENST00000506244 CREB3L3Q68CJ9 461 aa19.56■□□□□ 0.72
SNCA-209ENST00000506244 SNRNP48Q6IEG0 339 aaKnown RBP19.56■□□□□ 0.72
SNCA-209ENST00000506244 NKX2-3Q8TAU0 364 aa19.56■□□□□ 0.72
SNCA-209ENST00000506244 TMEM106CQ9BVX2 250 aa19.56■□□□□ 0.72
SNCA-209ENST00000506244 RBBP6Q7Z6E9 1792 aaKnown RBP19.56■□□□□ 0.72
SNCA-209ENST00000506244 ELNP15502 786 aa19.55■□□□□ 0.72
SNCA-209ENST00000506244 ZKSCAN1P17029 563 aaPredicted RBP19.55■□□□□ 0.72
SNCA-209ENST00000506244 CYP2B6P20813 491 aa19.55■□□□□ 0.72
SNCA-209ENST00000506244 ZNF543Q08ER8 600 aa19.55■□□□□ 0.72
SNCA-209ENST00000506244 NECTIN1Q15223 517 aa19.55■□□□□ 0.72
SNCA-209ENST00000506244 USP6NLQ92738 828 aa19.55■□□□□ 0.72
SNCA-209ENST00000506244 IFIT3O14879 490 aaKnown RBP19.54■□□□□ 0.72
SNCA-209ENST00000506244 INHAP05111 366 aa19.54■□□□□ 0.72
SNCA-209ENST00000506244 FCER1AP12319 257 aa19.54■□□□□ 0.72
SNCA-209ENST00000506244 SOX10P56693 466 aa19.54■□□□□ 0.72
SNCA-209ENST00000506244 ASPRV1Q53RT3 343 aa19.54■□□□□ 0.72
SNCA-209ENST00000506244 BTNL9Q6UXG8 535 aa19.54■□□□□ 0.72
SNCA-209ENST00000506244 STOX1Q6ZVD7 989 aa19.54■□□□□ 0.72
SNCA-209ENST00000506244 CYB5R4Q7L1T6 521 aa19.54■□□□□ 0.72
SNCA-209ENST00000506244 RASGRP2Q7LDG7 609 aa19.54■□□□□ 0.72
SNCA-209ENST00000506244 MTA3Q9BTC8 594 aa19.54■□□□□ 0.72
SNCA-209ENST00000506244 FBXO40Q9UH90 709 aa19.54■□□□□ 0.72
SNCA-209ENST00000506244 PNMA2Q9UL42 364 aa19.54■□□□□ 0.72
SNCA-209ENST00000506244 FRMPD2Q68DX3 1309 aaPredicted RBP19.53■□□□□ 0.72
SNCA-209ENST00000506244 HOXC6P09630 235 aa19.53■□□□□ 0.72
SNCA-209ENST00000506244 ADORA2AP29274 412 aa19.53■□□□□ 0.72
SNCA-209ENST00000506244 KRT32Q14532 448 aa19.53■□□□□ 0.72
SNCA-209ENST00000506244 KCTD2Q14681 263 aa19.53■□□□□ 0.72
SNCA-209ENST00000506244 SYDE2Q5VT97 1194 aa19.53■□□□□ 0.72
SNCA-209ENST00000506244 MB21D2Q8IYB1 491 aaPredicted RBP19.53■□□□□ 0.72
SNCA-209ENST00000506244 CPXCR1Q8N123 301 aa19.53■□□□□ 0.72
SNCA-209ENST00000506244 CHMP4CQ96CF2 233 aa19.53■□□□□ 0.72
SNCA-209ENST00000506244 MMP19Q99542 508 aa19.53■□□□□ 0.72
SNCA-209ENST00000506244 PRR12Q9ULL5 1215 aa19.53■□□□□ 0.72
SNCA-209ENST00000506244 TAF6LQ9Y6J9 622 aa19.53■□□□□ 0.72
SNCA-209ENST00000506244 EPB41L2O43491 1005 aaKnown RBP19.52■□□□□ 0.72
SNCA-209ENST00000506244 MCM5P33992 734 aa19.52■□□□□ 0.72
SNCA-209ENST00000506244 WTAPQ15007 396 aa19.52■□□□□ 0.72
SNCA-209ENST00000506244 SEC23AQ15436 765 aa19.52■□□□□ 0.72
SNCA-209ENST00000506244 TKFCQ3LXA3 575 aa19.52■□□□□ 0.72
SNCA-209ENST00000506244 TMEM67Q5HYA8 995 aa19.52■□□□□ 0.72
SNCA-209ENST00000506244 DPP9Q86TI2 863 aa19.52■□□□□ 0.72
SNCA-209ENST00000506244 CHST13Q8NET6 341 aa19.52■□□□□ 0.72
SNCA-209ENST00000506244 RAVER2Q9HCJ3 691 aaKnown RBP19.52■□□□□ 0.72
SNCA-209ENST00000506244 GPCPD1Q9NPB8 672 aa19.52■□□□□ 0.72
SNCA-209ENST00000506244 PARP1P09874 1014 aaKnown RBP19.51■□□□□ 0.71
SNCA-209ENST00000506244 TRIB2Q92519 343 aa19.51■□□□□ 0.71
SNCA-209ENST00000506244 TMEM87BQ96K49 555 aa19.51■□□□□ 0.71
SNCA-209ENST00000506244 RANBP17Q9H2T7 1088 aaKnown RBP19.51■□□□□ 0.71
SNCA-209ENST00000506244 CCL5P13501 91 aa19.5■□□□□ 0.71
SNCA-209ENST00000506244 MFSD14CQ5VZR4 134 aa19.5■□□□□ 0.71
SNCA-209ENST00000506244 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.5■□□□□ 0.71
SNCA-209ENST00000506244 PRC1O43663 620 aa19.49■□□□□ 0.71
SNCA-209ENST00000506244 EIF5BO60841 1220 aaKnown RBP19.49■□□□□ 0.71
SNCA-209ENST00000506244 MYCP01106 439 aaPredicted RBP19.49■□□□□ 0.71
SNCA-209ENST00000506244 ICAM1P05362 532 aa19.49■□□□□ 0.71
SNCA-209ENST00000506244 CAPN2P17655 700 aa19.49■□□□□ 0.71
SNCA-209ENST00000506244 SLC16A2P36021 539 aa19.49■□□□□ 0.71
SNCA-209ENST00000506244 SLC4A3P48751 1232 aa19.49■□□□□ 0.71
SNCA-209ENST00000506244 ANTXR2P58335 489 aa19.49■□□□□ 0.71
SNCA-209ENST00000506244 TSGA10IPQ3SY00 556 aa19.49■□□□□ 0.71
SNCA-209ENST00000506244 OLFML2BQ68BL8 750 aa19.49■□□□□ 0.71
SNCA-209ENST00000506244 TTBK2Q6IQ55 1244 aa19.49■□□□□ 0.71
SNCA-209ENST00000506244 CCDC174Q6PII3 467 aa19.49■□□□□ 0.71
SNCA-209ENST00000506244 CATIPQ7Z7H3 387 aa19.49■□□□□ 0.71
SNCA-209ENST00000506244 TMTC2Q8N394 836 aa19.49■□□□□ 0.71
SNCA-209ENST00000506244 RNF208Q9H0X6 261 aa19.49■□□□□ 0.71
SNCA-209ENST00000506244 ACAD9Q9H845 621 aa19.49■□□□□ 0.71
SNCA-209ENST00000506244 CCPG1Q9ULG6 757 aa19.49■□□□□ 0.71
SNCA-209ENST00000506244 CENPFP49454 3210 aa19.49■□□□□ 0.71
SNCA-209ENST00000506244 HMGB1P09429 215 aaKnown RBP19.48■□□□□ 0.71
SNCA-209ENST00000506244 MTFR1Q15390 333 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms