RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 SPATA5Q8NB90 893 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 LPIN2Q92539 896 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 NSUN4Q96CB9 384 aaKnown RBP6.95□□□□□ -1.3
SCLT1-207ENST00000506233 AIFM3Q96NN9 605 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 PDRG1Q9NUG6 133 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 POLIQ9UNA4 740 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 MROH7-TTC4A0A0A0MT08 1334 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 A6NHS1 94 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 TOM1O60784 492 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 DNM1Q05193 864 aaKnown RBP6.95□□□□□ -1.3
SCLT1-207ENST00000506233 APOBRQ0VD83 1088 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 BIRC2Q13490 618 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 PUM3Q15397 648 aaKnown RBP6.95□□□□□ -1.3
SCLT1-207ENST00000506233 SOGA3Q5TF21 947 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 IL17RBQ9NRM6 502 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 TRMT112Q9UI30 125 aaKnown RBP6.95□□□□□ -1.3
SCLT1-207ENST00000506233 UBAP1LF5GYI3 381 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 SH2B2O14492 632 aaPredicted RBP6.95□□□□□ -1.3
SCLT1-207ENST00000506233 KCNA3P22001 575 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 GYG1P46976 350 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 PTPAQ15257 358 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 ATP2B3Q16720 1220 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 PDXDC2PQ6P474 469 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 RASGRP2Q7LDG7 609 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 APPBP2Q92624 585 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 EMID1Q96A84 441 aaPredicted RBP6.95□□□□□ -1.3
SCLT1-207ENST00000506233 RPS6KL1Q9Y6S9 549 aa6.95□□□□□ -1.3
SCLT1-207ENST00000506233 OTOFQ9HC10 1997 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 STX6O43752 255 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 LIG1P18858 919 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 ANKS3Q6ZW76 656 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 CKAP2LQ8IYA6 745 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 GPR101Q96P66 508 aaPredicted RBP6.94□□□□□ -1.3
SCLT1-207ENST00000506233 FSD1Q9BTV5 496 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 UTP14AQ9BVJ6 771 aaKnown RBP6.94□□□□□ -1.3
SCLT1-207ENST00000506233 MAF1Q9H063 256 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 POLLQ9UGP5 575 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 MYH7BA7E2Y1 1941 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 IFIT1P09914 478 aaKnown RBP6.94□□□□□ -1.3
SCLT1-207ENST00000506233 PTK2Q05397 1052 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 IFIT5Q13325 482 aaKnown RBP6.94□□□□□ -1.3
SCLT1-207ENST00000506233 C16orf46Q6P387 395 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 GJD3Q8N144 294 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 DDX11Q96FC9 970 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 ZSWIM5Q9P217 1185 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 SLURP2P0DP57 97 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 HOXA10P31260 410 aaPredicted RBP6.94□□□□□ -1.3
SCLT1-207ENST00000506233 ATP2B2Q01814 1243 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 AXDND1Q5T1B0 1012 aaPredicted RBP6.94□□□□□ -1.3
SCLT1-207ENST00000506233 MCTP1Q6DN14 999 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 LDHAL6AQ6ZMR3 332 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 SAMD7Q7Z3H4 446 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 CELF2-AS1Q8N7Q2 184 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 NEK1Q96PY6 1258 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 DEPDC7Q96QD5 511 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 PGAP2Q9UHJ9 254 aa6.94□□□□□ -1.3
SCLT1-207ENST00000506233 NIP7Q9Y221 180 aaKnown RBP eCLIP6.94□□□□□ -1.3
SCLT1-207ENST00000506233 ELP1O95163 1332 aa6.93□□□□□ -1.3
SCLT1-207ENST00000506233 DICER1Q9UPY3 1922 aaKnown RBP6.93□□□□□ -1.3
SCLT1-207ENST00000506233 FAM237AA0A1B0GTK4 181 aa6.93□□□□□ -1.3
SCLT1-207ENST00000506233 CCDC189A1A4V9 331 aa6.93□□□□□ -1.3
SCLT1-207ENST00000506233 RNF40O75150 1001 aa6.93□□□□□ -1.3
SCLT1-207ENST00000506233 EPHA4P54764 986 aa6.93□□□□□ -1.3
SCLT1-207ENST00000506233 DALRD3Q5D0E6 543 aaKnown RBP6.93□□□□□ -1.3
SCLT1-207ENST00000506233 SGMS1Q86VZ5 419 aa6.93□□□□□ -1.3
SCLT1-207ENST00000506233 CERS5Q8N5B7 392 aa6.93□□□□□ -1.3
SCLT1-207ENST00000506233 USB1Q9BQ65 265 aaKnown RBP6.93□□□□□ -1.3
SCLT1-207ENST00000506233 QTRT2Q9H974 415 aaKnown RBP6.93□□□□□ -1.3
SCLT1-207ENST00000506233 CNTN3Q9P232 1028 aa6.93□□□□□ -1.3
SCLT1-207ENST00000506233 CYP2D7A0A087X1C5 515 aa6.93□□□□□ -1.3
SCLT1-207ENST00000506233 BMP6P22004 513 aa6.93□□□□□ -1.3
SCLT1-207ENST00000506233 PTPREP23469 700 aa6.93□□□□□ -1.3
SCLT1-207ENST00000506233 DYNLL1P63167 89 aaKnown RBP6.93□□□□□ -1.3
SCLT1-207ENST00000506233 GRIPAP1Q4V328 841 aa6.93□□□□□ -1.3
SCLT1-207ENST00000506233 GPR153Q6NV75 609 aa6.93□□□□□ -1.3
SCLT1-207ENST00000506233 DHX32Q7L7V1 743 aaKnown RBP6.93□□□□□ -1.3
SCLT1-207ENST00000506233 SLC39A7Q92504 469 aa6.93□□□□□ -1.3
SCLT1-207ENST00000506233 ZNF274Q96GC6 653 aaPredicted RBP6.93□□□□□ -1.3
SCLT1-207ENST00000506233 CITED4Q96RK1 184 aa6.93□□□□□ -1.3
SCLT1-207ENST00000506233 REV3LO60673 3130 aa6.93□□□□□ -1.3
SCLT1-207ENST00000506233 MCM2P49736 904 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 PRELPP51888 382 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 SQSTM1Q13501 440 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 PARP10Q53GL7 1025 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 KIF6Q6ZMV9 814 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 KIAA0907Q7Z7F0 614 aaPredicted RBP6.92□□□□□ -1.3
SCLT1-207ENST00000506233 PRPF38AQ8NAV1 312 aaKnown RBP6.92□□□□□ -1.3
SCLT1-207ENST00000506233 KCNQ5Q9NR82 932 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 PRC1O43663 620 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 WDHD1O75717 1129 aaPredicted RBP6.92□□□□□ -1.3
SCLT1-207ENST00000506233 IL1R1P14778 569 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 GRIN1Q05586 938 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 IL17AQ16552 155 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 ZFYVE27Q5T4F4 411 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 CTR9Q6PD62 1173 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 SH3BP5LQ7L8J4 393 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 FERMT3Q86UX7 667 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 COL23A1Q86Y22 540 aaPredicted RBP6.92□□□□□ -1.3
SCLT1-207ENST00000506233 IFNL3Q8IZI9 196 aa6.92□□□□□ -1.3
SCLT1-207ENST00000506233 DNAJC7Q99615 494 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms