RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 PPP1R9AQ9ULJ8 1098 aa9.89□□□□□ -0.83
SNF8-204ENST00000506104 ZBED4O75132 1171 aa9.88□□□□□ -0.83
SNF8-204ENST00000506104 RAB11FIP3O75154 756 aa9.88□□□□□ -0.83
SNF8-204ENST00000506104 COPB2P35606 906 aa9.88□□□□□ -0.83
SNF8-204ENST00000506104 ACLYP53396 1101 aa9.88□□□□□ -0.83
SNF8-204ENST00000506104 SNX17Q15036 470 aa9.88□□□□□ -0.83
SNF8-204ENST00000506104 KCNA10Q16322 511 aa9.88□□□□□ -0.83
SNF8-204ENST00000506104 ZNF792Q3KQV3 632 aa9.88□□□□□ -0.83
SNF8-204ENST00000506104 ZSCAN25Q6NSZ9 544 aa9.88□□□□□ -0.83
SNF8-204ENST00000506104 CTR9Q6PD62 1173 aa9.88□□□□□ -0.83
SNF8-204ENST00000506104 ANKRD35Q8N283 1001 aa9.88□□□□□ -0.83
SNF8-204ENST00000506104 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.88□□□□□ -0.83
SNF8-204ENST00000506104 SPC25Q9HBM1 224 aa9.88□□□□□ -0.83
SNF8-204ENST00000506104 RAVER2Q9HCJ3 691 aaKnown RBP9.88□□□□□ -0.83
SNF8-204ENST00000506104 CLIP2Q9UDT6 1046 aa9.88□□□□□ -0.83
SNF8-204ENST00000506104 MTMR7Q9Y216 660 aa9.88□□□□□ -0.83
SNF8-204ENST00000506104 GBF1Q92538 1859 aa9.87□□□□□ -0.83
SNF8-204ENST00000506104 ZBED9Q6R2W3 1325 aa9.87□□□□□ -0.83
SNF8-204ENST00000506104 SYNRGQ9UMZ2 1314 aa9.87□□□□□ -0.83
SNF8-204ENST00000506104 CUL9Q8IWT3 2517 aa9.87□□□□□ -0.83
SNF8-204ENST00000506104 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.87□□□□□ -0.83
SNF8-204ENST00000506104 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.87□□□□□ -0.83
SNF8-204ENST00000506104 GRXCR1A8MXD5 290 aa9.87□□□□□ -0.83
SNF8-204ENST00000506104 PRDM1O75626 825 aa9.87□□□□□ -0.83
SNF8-204ENST00000506104 ZNF865P0CJ78 1059 aaPredicted RBP9.87□□□□□ -0.83
SNF8-204ENST00000506104 ACRP10323 421 aa9.87□□□□□ -0.83
SNF8-204ENST00000506104 ATP5JP18859 108 aa9.87□□□□□ -0.83
SNF8-204ENST00000506104 IGFBP4P22692 258 aa9.87□□□□□ -0.83
SNF8-204ENST00000506104 DNAJB2P25686 324 aa9.87□□□□□ -0.83
SNF8-204ENST00000506104 TDO2P48775 406 aa9.87□□□□□ -0.83
SNF8-204ENST00000506104 IRX5P78411 483 aaPredicted RBP9.87□□□□□ -0.83
SNF8-204ENST00000506104 GRIN2CQ14957 1233 aa9.87□□□□□ -0.83
SNF8-204ENST00000506104 CCDC85BQ15834 202 aaPredicted RBP9.87□□□□□ -0.83
SNF8-204ENST00000506104 RPAP2Q8IXW5 612 aaPredicted RBP9.87□□□□□ -0.83
SNF8-204ENST00000506104 ZNF444Q8N0Y2 327 aaPredicted RBP9.87□□□□□ -0.83
SNF8-204ENST00000506104 MICALL1Q8N3F8 863 aa9.87□□□□□ -0.83
SNF8-204ENST00000506104 GLT1D1Q96MS3 346 aa9.87□□□□□ -0.83
SNF8-204ENST00000506104 GAS2L1Q99501 681 aaPredicted RBP9.87□□□□□ -0.83
SNF8-204ENST00000506104 HAUS7Q99871 368 aa9.87□□□□□ -0.83
SNF8-204ENST00000506104 PUS7LQ9H0K6 701 aaKnown RBP9.87□□□□□ -0.83
SNF8-204ENST00000506104 ARPP21Q9UBL0 812 aaPredicted RBP9.87□□□□□ -0.83
SNF8-204ENST00000506104 NRBP1Q9UHY1 535 aa9.87□□□□□ -0.83
SNF8-204ENST00000506104 DDX19BQ9UMR2 479 aa9.87□□□□□ -0.83
SNF8-204ENST00000506104 MYADML2A6NDP7 307 aa9.86□□□□□ -0.83
SNF8-204ENST00000506104 KIAA0355O15063 1070 aa9.86□□□□□ -0.83
SNF8-204ENST00000506104 TLR3O15455 904 aaKnown RBP9.86□□□□□ -0.83
SNF8-204ENST00000506104 NDUFB10O96000 172 aa9.86□□□□□ -0.83
SNF8-204ENST00000506104 FAAP100Q0VG06 881 aa9.86□□□□□ -0.83
SNF8-204ENST00000506104 GNASQ5JWF2 1037 aa9.86□□□□□ -0.83
SNF8-204ENST00000506104 CCDC174Q6PII3 467 aa9.86□□□□□ -0.83
SNF8-204ENST00000506104 LRRC47Q8N1G4 583 aaKnown RBP9.86□□□□□ -0.83
SNF8-204ENST00000506104 IL27Q8NEV9 243 aa9.86□□□□□ -0.83
SNF8-204ENST00000506104 SYMPKQ92797 1274 aaKnown RBP9.86□□□□□ -0.83
SNF8-204ENST00000506104 TIFAQ96CG3 184 aa9.86□□□□□ -0.83
SNF8-204ENST00000506104 TEX13BQ9BXU2 312 aa9.86□□□□□ -0.83
SNF8-204ENST00000506104 ZNF576Q9H609 170 aa9.86□□□□□ -0.83
SNF8-204ENST00000506104 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.86□□□□□ -0.83
SNF8-204ENST00000506104 ZNF214Q9UL59 606 aaPredicted RBP9.86□□□□□ -0.83
SNF8-204ENST00000506104 DIS3Q9Y2L1 958 aaKnown RBP9.86□□□□□ -0.83
SNF8-204ENST00000506104 RIPK3Q9Y572 518 aa9.86□□□□□ -0.83
SNF8-204ENST00000506104 COL6A3P12111 3177 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 F5H6K3 240 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 ADAMTS4O75173 837 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 SNAI1O95863 264 aaPredicted RBP9.85□□□□□ -0.83
SNF8-204ENST00000506104 TIMP1P01033 207 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 IGHA2P01877 340 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 ASGR1P07306 291 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 BEX3Q00994 111 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 KLRC3Q07444 240 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 PPIGQ13427 754 aaKnown RBP eCLIP9.85□□□□□ -0.832e-10■□□□□ 9.9
SNF8-204ENST00000506104 ACVR2BQ13705 512 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 UBE3CQ15386 1083 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 CCDC144BQ3MJ40 725 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 C1orf53Q5VUE5 145 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 TSHZ3Q63HK5 1081 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 MIER1Q8N108 512 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 TMEM199Q8N511 208 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 PRPF38AQ8NAV1 312 aaKnown RBP9.85□□□□□ -0.83
SNF8-204ENST00000506104 PCSK9Q8NBP7 692 aaKnown RBP9.85□□□□□ -0.83
SNF8-204ENST00000506104 GPATCH3Q96I76 525 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.85□□□□□ -0.83
SNF8-204ENST00000506104 TSEN34Q9BSV6 310 aaKnown RBP9.85□□□□□ -0.83
SNF8-204ENST00000506104 LRRCC1Q9C099 1032 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 PRDM12Q9H4Q4 367 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 PRDM6Q9NQX0 595 aa9.85□□□□□ -0.83
SNF8-204ENST00000506104 TCF20Q9UGU0 1960 aaKnown RBP9.84□□□□□ -0.83
SNF8-204ENST00000506104 MROH7Q68CQ1 1323 aa9.84□□□□□ -0.83
SNF8-204ENST00000506104 A0A0U1RQG5 324 aaPredicted RBP9.84□□□□□ -0.83
SNF8-204ENST00000506104 MOXD2PA6NHM9 499 aa9.84□□□□□ -0.83
SNF8-204ENST00000506104 DUSP11O75319 330 aaKnown RBP9.84□□□□□ -0.83
SNF8-204ENST00000506104 CSF2RAP15509 400 aa9.84□□□□□ -0.83
SNF8-204ENST00000506104 RASA1P20936 1047 aa9.84□□□□□ -0.83
SNF8-204ENST00000506104 CYP2C18P33260 490 aa9.84□□□□□ -0.83
SNF8-204ENST00000506104 PBX2P40425 430 aa9.84□□□□□ -0.83
SNF8-204ENST00000506104 SNAP25P60880 206 aa9.84□□□□□ -0.83
SNF8-204ENST00000506104 SLFN13Q68D06 897 aa9.84□□□□□ -0.83
SNF8-204ENST00000506104 ARMCX2Q7L311 632 aa9.84□□□□□ -0.83
SNF8-204ENST00000506104 EEPD1Q7L9B9 569 aa9.84□□□□□ -0.83
SNF8-204ENST00000506104 SIRT2Q8IXJ6 389 aa9.84□□□□□ -0.83
SNF8-204ENST00000506104 USP38Q8NB14 1042 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms