RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 STRNO43815 780 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 FRAT2O75474 233 aaPredicted RBP4.29□□□□□ -1.72
TCOF1-208ENST00000506063 EYA4O95677 639 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 LMNAP02545 664 aaKnown RBP4.29□□□□□ -1.72
TCOF1-208ENST00000506063 HSPA5P11021 654 aaKnown RBP4.29□□□□□ -1.72
TCOF1-208ENST00000506063 AKR1A1P14550 325 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 ICAM3P32942 547 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 RHBDL3P58872 404 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 DEFB103AP81534 67 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 TCTN1Q2MV58 587 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 NBPF20Q3BBV1 942 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 DUSP27Q5VZP5 1158 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 CATSPERGQ6ZRH7 1159 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 BANK1Q8NDB2 785 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 CDCA7LQ96GN5 454 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 MSLNLQ96KJ4 702 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 GLT1D1Q96MS3 346 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 TGS1Q96RS0 853 aaKnown RBP4.29□□□□□ -1.72
TCOF1-208ENST00000506063 C17orf80Q9BSJ5 609 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 PUS3Q9BZE2 481 aaKnown RBP4.29□□□□□ -1.72
TCOF1-208ENST00000506063 CLDND1Q9NY35 253 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 TMOD4Q9NZQ9 345 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 TIMELESSQ9UNS1 1208 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 FREM2Q5SZK8 3169 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 CACNA1FO60840 1977 aa4.29□□□□□ -1.72
TCOF1-208ENST00000506063 KIAA1671Q9BY89 1806 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 ASTN1O14525 1302 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 A0A1B0GUL7 405 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 DCDC2BA2VCK2 349 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 PI4KAP2A4QPH2 592 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 USP17L10C9JJH3 530 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 TAF4O00268 1085 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 TLR3O15455 904 aaKnown RBP4.28□□□□□ -1.72
TCOF1-208ENST00000506063 DUSP11O75319 330 aaKnown RBP4.28□□□□□ -1.72
TCOF1-208ENST00000506063 NPM3O75607 178 aaKnown RBP4.28□□□□□ -1.72
TCOF1-208ENST00000506063 SNAI1O95863 264 aaPredicted RBP4.28□□□□□ -1.72
TCOF1-208ENST00000506063 ERCC3P19447 782 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 TGM1P22735 817 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 GTF2F1P35269 517 aaKnown RBP eCLIP4.28□□□□□ -1.72
TCOF1-208ENST00000506063 WDR5P61964 334 aaKnown RBP4.28□□□□□ -1.72
TCOF1-208ENST00000506063 HYAL1Q12794 435 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 IFIT5Q13325 482 aaKnown RBP4.28□□□□□ -1.72
TCOF1-208ENST00000506063 PTPN21Q16825 1174 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 ZNF792Q3KQV3 632 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 TIGD5Q53EQ6 642 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 CWF19L1Q69YN2 538 aaKnown RBP4.28□□□□□ -1.72
TCOF1-208ENST00000506063 KSR2Q6VAB6 950 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 DEFB128Q7Z7B8 93 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 ZSCAN29Q8IWY8 852 aaPredicted RBP4.28□□□□□ -1.72
TCOF1-208ENST00000506063 ABRAQ8N0Z2 381 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 PI4KAP1Q8N8J0 262 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 SUMF1Q8NBK3 374 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 SHCBP1Q8NEM2 672 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 ZNF384Q8TF68 577 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 CHAMP1Q96JM3 812 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 CFAP53Q96M91 514 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 TINF2Q9BSI4 451 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 AS3MTQ9HBK9 375 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 AKAP13Q12802 2813 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 TENM4Q6N022 2769 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 PTPN13Q12923 2485 aa4.28□□□□□ -1.72
TCOF1-208ENST00000506063 RALGAPA1Q6GYQ0 2036 aa4.28□□□□□ -1.73
TCOF1-208ENST00000506063 MROH5Q6ZUA9 1318 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 NAV1Q8NEY1 1877 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 KIF28PB7ZC32 967 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 USP17L15C9J2P7 530 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 USP17L13C9JLJ4 530 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 USP17L11C9JVI0 530 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 USP17L18D6R9N7 530 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 USP17L22D6RA61 530 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 USP17L17D6RBQ6 530 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 USP17L19D6RCP7 530 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 USP17L20D6RJB6 530 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 LINC01565O15544 149 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 GJB5O95377 273 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 PROS1P07225 676 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 VCAM1P19320 739 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 FGFR2P21802 821 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 PMLP29590 882 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 PPP2R1AP30153 589 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 GJA9P57773 515 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 SHC2P98077 582 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 USP17L24Q0WX57 530 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 MKRN4PQ13434 485 aaPredicted RBP4.27□□□□□ -1.73
TCOF1-208ENST00000506063 ANGPT1Q15389 498 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 ASTLQ6HA08 431 aaPredicted RBP4.27□□□□□ -1.73
TCOF1-208ENST00000506063 LRSAM1Q6UWE0 723 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 LDHAL6AQ6ZMR3 332 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 METTL16Q86W50 562 aaKnown RBP4.27□□□□□ -1.73
TCOF1-208ENST00000506063 PCSK9Q8NBP7 692 aaKnown RBP4.27□□□□□ -1.73
TCOF1-208ENST00000506063 SMRP1Q8NCR6 262 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 FBXO22Q8NEZ5 403 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 CYP2W1Q8TAV3 490 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 SP7Q8TDD2 431 aaPredicted RBP4.27□□□□□ -1.73
TCOF1-208ENST00000506063 RUBCNQ92622 972 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 SPATC1LQ9H0A9 340 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 SEMA4AQ9H3S1 761 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 SMOC2Q9H3U7 446 aa4.27□□□□□ -1.73
TCOF1-208ENST00000506063 NSUN3Q9H649 340 aaKnown RBP4.27□□□□□ -1.73
TCOF1-208ENST00000506063 CWC22Q9HCG8 908 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms