RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 ARFGAP3Q9NP61 516 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 ZCCHC17Q9NP64 241 aaKnown RBP8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 ABHD10Q9NUJ1 306 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 RMND1Q9NWS8 449 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 LIMA1Q9UHB6 759 aaKnown RBP8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 STX8Q9UNK0 236 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 MYH13Q9UKX3 1938 aa8.6□□□□□ -1.03
PPARGC1A-204ENST00000506055 CTAGE9A4FU28 777 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 ZPR1O75312 459 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 TBC1D8O95759 1140 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 TFRCP02786 760 aaKnown RBP8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 GOLGA8HP0CJ92 632 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 KRT9P35527 623 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 ERVK-24P63145 666 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 DIXDC1Q155Q3 683 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 INF2Q27J81 1249 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 C12orf60Q5U649 245 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 TPTE2Q6XPS3 522 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 TMTC1Q8IUR5 882 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 SH3RF3Q8TEJ3 882 aaPredicted RBP8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 NYXQ9GZU5 481 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 DISC1Q9NRI5 854 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 SPATA31A5Q5VU36 1347 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 SPATA31A7Q8IWB4 1347 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 LDHBP07195 334 aaKnown RBP8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 UBA7P41226 1012 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 WWC2Q6AWC2 1192 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 CYP26C1Q6V0L0 522 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 SRGAP1Q7Z6B7 1085 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 DGKHQ86XP1 1220 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 SLC35F6Q8N357 371 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 SLC44A5Q8NCS7 719 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 TGFBRAP1Q8WUH2 860 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 CCDC51Q96ER9 411 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 SLF1Q9BQI6 1058 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 TMEM60Q9H2L4 133 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 CPVLQ9H3G5 476 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 SAP30BPQ9UHR5 308 aaKnown RBP8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 MAD2L2Q9UI95 211 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 PCDHA6Q9UN73 950 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 PCDHA8Q9Y5H6 950 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 ITIH6Q6UXX5 1313 aa8.59□□□□□ -1.03
PPARGC1A-204ENST00000506055 GNPATO15228 680 aa8.58□□□□□ -1.04
PPARGC1A-204ENST00000506055 PARP1P09874 1014 aaKnown RBP8.58□□□□□ -1.04
PPARGC1A-204ENST00000506055 PMS1P54277 932 aaKnown RBP8.58□□□□□ -1.04
PPARGC1A-204ENST00000506055 SPAG1Q07617 926 aa8.58□□□□□ -1.04
PPARGC1A-204ENST00000506055 SPTY2D1Q68D10 685 aaPredicted RBP8.58□□□□□ -1.04
PPARGC1A-204ENST00000506055 ZNF444Q8N0Y2 327 aaPredicted RBP8.58□□□□□ -1.04
PPARGC1A-204ENST00000506055 CHP1Q99653 195 aa8.58□□□□□ -1.04
PPARGC1A-204ENST00000506055 SH3GLB2Q9NR46 395 aa8.58□□□□□ -1.04
PPARGC1A-204ENST00000506055 CDC23Q9UJX2 597 aa8.58□□□□□ -1.04
PPARGC1A-204ENST00000506055 TTF2Q9UNY4 1162 aaKnown RBP8.58□□□□□ -1.04
PPARGC1A-204ENST00000506055 A0A1B0GUL6 1792 aa8.58□□□□□ -1.04
PPARGC1A-204ENST00000506055 LAMB2P55268 1798 aa8.58□□□□□ -1.04
PPARGC1A-204ENST00000506055 H7C1D1 291 aa8.58□□□□□ -1.04
PPARGC1A-204ENST00000506055 CYTH3O43739 400 aa8.58□□□□□ -1.04
PPARGC1A-204ENST00000506055 NAALADL2Q58DX5 795 aa8.58□□□□□ -1.04
PPARGC1A-204ENST00000506055 IRF2BP1Q8IU81 584 aa8.58□□□□□ -1.04
PPARGC1A-204ENST00000506055 ROBO1Q9Y6N7 1651 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 TTC26A0AVF1 554 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 SMC1AQ14683 1233 aaKnown RBP8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 GRIK5Q16478 980 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 SLC35G1Q2M3R5 365 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 AMOTL1Q8IY63 956 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 ADSSL1Q8N142 457 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 TRIM47Q96LD4 638 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 GPR101Q96P66 508 aaPredicted RBP8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 MKRN1Q9UHC7 482 aaKnown RBP8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 NARFQ9UHQ1 456 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 GUCA1BQ9UMX6 200 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 ATP8B1O43520 1251 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 CCNT1O60563 726 aaKnown RBP8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 RHOXF2BP0C7M4 288 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 TM4SF1P30408 202 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 GRM4Q14833 912 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 LONRF2Q1L5Z9 754 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 MAPKAPK5Q8IW41 473 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 CEP112Q8N8E3 955 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 TMEM47Q9BQJ4 181 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 RHOXF2Q9BQY4 288 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 FUT8Q9BYC5 575 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 VAT1LQ9HCJ6 419 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 TRIM10Q9UDY6 481 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 LUC7L2Q9Y383 392 aaKnown RBP8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 PDS5AQ29RF7 1337 aaKnown RBP8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 SCN7AQ01118 1682 aa8.57□□□□□ -1.04
PPARGC1A-204ENST00000506055 KLRF2D3W0D1 207 aa8.56□□□□□ -1.04
PPARGC1A-204ENST00000506055 M0R2N6 131 aa8.56□□□□□ -1.04
PPARGC1A-204ENST00000506055 STXBP3O00186 592 aa8.56□□□□□ -1.04
PPARGC1A-204ENST00000506055 BAG3O95817 575 aa8.56□□□□□ -1.04
PPARGC1A-204ENST00000506055 OAS2P29728 719 aaKnown RBP8.56□□□□□ -1.04
PPARGC1A-204ENST00000506055 GNAQP50148 359 aa8.56□□□□□ -1.04
PPARGC1A-204ENST00000506055 TRIM14Q14142 442 aa8.56□□□□□ -1.04
PPARGC1A-204ENST00000506055 TSR1Q2NL82 804 aaKnown RBP8.56□□□□□ -1.04
PPARGC1A-204ENST00000506055 LETM2Q2VYF4 491 aa8.56□□□□□ -1.04
PPARGC1A-204ENST00000506055 BARGINQ6ZT62 677 aa8.56□□□□□ -1.04
PPARGC1A-204ENST00000506055 AMIGO3Q86WK7 504 aa8.56□□□□□ -1.04
PPARGC1A-204ENST00000506055 MB21D1Q8N884 522 aa8.56□□□□□ -1.04
PPARGC1A-204ENST00000506055 NAPGQ99747 312 aaPredicted RBP8.56□□□□□ -1.04
PPARGC1A-204ENST00000506055 ANKZF1Q9H8Y5 726 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms