RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 CETPP11597 493 aa13.18□□□□□ -0.3
SGCA-205ENST00000505964 IFNAR1P17181 557 aa13.18□□□□□ -0.3
SGCA-205ENST00000505964 CDC27P30260 824 aa13.18□□□□□ -0.3
SGCA-205ENST00000505964 KIF5BP33176 963 aa13.18□□□□□ -0.3
SGCA-205ENST00000505964 ICA1Q05084 483 aa13.18□□□□□ -0.3
SGCA-205ENST00000505964 GRM4Q14833 912 aa13.18□□□□□ -0.3
SGCA-205ENST00000505964 NUP133Q8WUM0 1156 aa13.18□□□□□ -0.3
SGCA-205ENST00000505964 TRIM47Q96LD4 638 aa13.18□□□□□ -0.3
SGCA-205ENST00000505964 MYL10Q9BUA6 226 aa13.18□□□□□ -0.3
SGCA-205ENST00000505964 NCOA5Q9HCD5 579 aaKnown RBP13.18□□□□□ -0.3
SGCA-205ENST00000505964 FOXD4L1Q9NU39 408 aa13.18□□□□□ -0.3
SGCA-205ENST00000505964 CHMP5Q9NZZ3 219 aa13.18□□□□□ -0.3
SGCA-205ENST00000505964 CLIP2Q9UDT6 1046 aa13.18□□□□□ -0.3
SGCA-205ENST00000505964 KIF3AQ9Y496 699 aa13.18□□□□□ -0.3
SGCA-205ENST00000505964 DNAH12Q6ZR08 3092 aa13.17□□□□□ -0.3
SGCA-205ENST00000505964 EEF2P13639 858 aaKnown RBP13.17□□□□□ -0.3
SGCA-205ENST00000505964 RXRAP19793 462 aa13.17□□□□□ -0.3
SGCA-205ENST00000505964 PDCP20941 246 aa13.17□□□□□ -0.3
SGCA-205ENST00000505964 GJB2P29033 226 aa13.17□□□□□ -0.3
SGCA-205ENST00000505964 ADD1P35611 737 aaKnown RBP13.17□□□□□ -0.3
SGCA-205ENST00000505964 PSMC4P43686 418 aa13.17□□□□□ -0.3
SGCA-205ENST00000505964 GNAQP50148 359 aa13.17□□□□□ -0.3
SGCA-205ENST00000505964 JAG1P78504 1218 aa13.17□□□□□ -0.3
SGCA-205ENST00000505964 SNAPC2Q13487 334 aa13.17□□□□□ -0.3
SGCA-205ENST00000505964 NTRK3Q16288 839 aa13.17□□□□□ -0.3
SGCA-205ENST00000505964 ERO1BQ86YB8 467 aa13.17□□□□□ -0.3
SGCA-205ENST00000505964 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
SGCA-205ENST00000505964 RGS22Q8NE09 1264 aa13.17□□□□□ -0.3
SGCA-205ENST00000505964 ARHGEF10LQ9HCE6 1279 aa13.17□□□□□ -0.3
SGCA-205ENST00000505964 BIN2Q9UBW5 565 aaPredicted RBP13.17□□□□□ -0.3
SGCA-205ENST00000505964 EYSQ5T1H1 3165 aa13.17□□□□□ -0.3
SGCA-205ENST00000505964 PTPRFP10586 1907 aa13.17□□□□□ -0.3
SGCA-205ENST00000505964 STK36Q9NRP7 1315 aa13.16□□□□□ -0.3
SGCA-205ENST00000505964 BAZ2BQ9UIF8 2168 aaKnown RBP13.16□□□□□ -0.3
SGCA-205ENST00000505964 PTPDC1A2A3K4 754 aa13.16□□□□□ -0.3
SGCA-205ENST00000505964 PALM3A6NDB9 673 aaPredicted RBP13.16□□□□□ -0.3
SGCA-205ENST00000505964 FMNL1O95466 1100 aaPredicted RBP13.16□□□□□ -0.3
SGCA-205ENST00000505964 SNHG28P0DPA3 235 aa13.16□□□□□ -0.3
SGCA-205ENST00000505964 CCL5P13501 91 aa13.16□□□□□ -0.3
SGCA-205ENST00000505964 OSBPP22059 807 aa13.16□□□□□ -0.3
SGCA-205ENST00000505964 SMARCA1P28370 1054 aa13.16□□□□□ -0.3
SGCA-205ENST00000505964 GRK4P32298 578 aa13.16□□□□□ -0.3
SGCA-205ENST00000505964 NUCB2P80303 420 aa13.16□□□□□ -0.3
SGCA-205ENST00000505964 RAB3GAP1Q15042 981 aa13.16□□□□□ -0.3
SGCA-205ENST00000505964 NOL9Q5SY16 702 aaKnown RBP13.16□□□□□ -0.3
SGCA-205ENST00000505964 C17orf99Q6UX52 265 aa13.16□□□□□ -0.3
SGCA-205ENST00000505964 SIAH1Q8IUQ4 282 aa13.16□□□□□ -0.3
SGCA-205ENST00000505964 CCDC144CPQ8IYA2 1237 aa13.16□□□□□ -0.3
SGCA-205ENST00000505964 SCYL3Q8IZE3 742 aa13.16□□□□□ -0.3
SGCA-205ENST00000505964 GMCL1P1Q8NEA9 526 aa13.16□□□□□ -0.3
SGCA-205ENST00000505964 RAET1EQ8TD07 263 aa13.16□□□□□ -0.3
SGCA-205ENST00000505964 LZTS2Q9BRK4 669 aa13.16□□□□□ -0.3
SGCA-205ENST00000505964 SH2D4AQ9H788 454 aa13.16□□□□□ -0.3
SGCA-205ENST00000505964 SRRDQ9UH36 339 aa13.16□□□□□ -0.3
SGCA-205ENST00000505964 MYPNQ86TC9 1320 aa13.15□□□□□ -0.3
SGCA-205ENST00000505964 SOX1O00570 391 aaPredicted RBP13.15□□□□□ -0.3
SGCA-205ENST00000505964 JAK2O60674 1132 aa13.15□□□□□ -0.3
SGCA-205ENST00000505964 PARP1P09874 1014 aaKnown RBP13.15□□□□□ -0.3
SGCA-205ENST00000505964 PDHBP11177 359 aa13.15□□□□□ -0.3
SGCA-205ENST00000505964 PPIL2Q13356 520 aa13.15□□□□□ -0.3
SGCA-205ENST00000505964 SHROOM1Q2M3G4 852 aaPredicted RBP13.15□□□□□ -0.3
SGCA-205ENST00000505964 ASPRV1Q53RT3 343 aa13.15□□□□□ -0.3
SGCA-205ENST00000505964 TMTC3Q6ZXV5 915 aa13.15□□□□□ -0.3
SGCA-205ENST00000505964 UBE2Q1Q7Z7E8 422 aa13.15□□□□□ -0.3
SGCA-205ENST00000505964 CLEC10AQ8IUN9 316 aa13.15□□□□□ -0.3
SGCA-205ENST00000505964 TRIM22Q8IYM9 498 aa13.15□□□□□ -0.3
SGCA-205ENST00000505964 LRRC47Q8N1G4 583 aaKnown RBP13.15□□□□□ -0.3
SGCA-205ENST00000505964 FAM184AQ8NB25 1140 aa13.15□□□□□ -0.3
SGCA-205ENST00000505964 DCAF4Q8WV16 495 aa13.15□□□□□ -0.3
SGCA-205ENST00000505964 LRCH3Q96II8 777 aa13.15□□□□□ -0.3
SGCA-205ENST00000505964 RNF26Q9BY78 433 aaPredicted RBP13.15□□□□□ -0.3
SGCA-205ENST00000505964 RNF208Q9H0X6 261 aa13.15□□□□□ -0.3
SGCA-205ENST00000505964 PRO3102Q9H379 93 aa13.15□□□□□ -0.3
SGCA-205ENST00000505964 TMX2Q9Y320 296 aa13.15□□□□□ -0.3
SGCA-205ENST00000505964 VCANP13611 3396 aa13.15□□□□□ -0.3
SGCA-205ENST00000505964 MYH15Q9Y2K3 1946 aa13.14□□□□□ -0.31
SGCA-205ENST00000505964 USP17L5A8MUK1 530 aa13.14□□□□□ -0.31
SGCA-205ENST00000505964 GNRH1P01148 92 aa13.14□□□□□ -0.31
SGCA-205ENST00000505964 FDPSP14324 419 aaKnown RBP13.14□□□□□ -0.31
SGCA-205ENST00000505964 INPP5BP32019 993 aa13.14□□□□□ -0.31
SGCA-205ENST00000505964 GJA8P48165 433 aa13.14□□□□□ -0.31
SGCA-205ENST00000505964 PRMT2P55345 433 aa13.14□□□□□ -0.31
SGCA-205ENST00000505964 ATP2B2Q01814 1243 aa13.14□□□□□ -0.31
SGCA-205ENST00000505964 SSRP1Q08945 709 aaKnown RBP13.14□□□□□ -0.31
SGCA-205ENST00000505964 FUT2Q10981 343 aa13.14□□□□□ -0.31
SGCA-205ENST00000505964 GPATCH4Q5T3I0 446 aaKnown RBP13.14□□□□□ -0.31
SGCA-205ENST00000505964 WASF1Q92558 559 aa13.14□□□□□ -0.31
SGCA-205ENST00000505964 HTATIP2Q9BUP3 242 aa13.14□□□□□ -0.31
SGCA-205ENST00000505964 ZCCHC17Q9NP64 241 aaKnown RBP13.14□□□□□ -0.31
SGCA-205ENST00000505964 ORC3Q9UBD5 711 aaPredicted RBP13.14□□□□□ -0.31
SGCA-205ENST00000505964 MAD2L2Q9UI95 211 aa13.14□□□□□ -0.31
SGCA-205ENST00000505964 A0A1W2PRG0 241 aa13.13□□□□□ -0.31
SGCA-205ENST00000505964 PDHXO00330 501 aa13.13□□□□□ -0.31
SGCA-205ENST00000505964 PRPF3O43395 683 aaKnown RBP13.13□□□□□ -0.31
SGCA-205ENST00000505964 FARP2O94887 1054 aaPredicted RBP13.13□□□□□ -0.31
SGCA-205ENST00000505964 GJB1P08034 283 aa13.13□□□□□ -0.31
SGCA-205ENST00000505964 PRKCZQ05513 592 aa13.13□□□□□ -0.31
SGCA-205ENST00000505964 DDX11Q96FC9 970 aa13.13□□□□□ -0.31
SGCA-205ENST00000505964 GMCL1Q96IK5 515 aa13.13□□□□□ -0.31
SGCA-205ENST00000505964 WDR18Q9BV38 432 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms