RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 VWA3AA6NCI4 1184 aa19.63■□□□□ 0.73
TRAPPC11-204ENST00000505676 CCDC93Q567U6 631 aa19.63■□□□□ 0.73
TRAPPC11-204ENST00000505676 C4orf32Q8N8J7 132 aa19.63■□□□□ 0.73
TRAPPC11-204ENST00000505676 TRIM34Q9BYJ4 488 aa19.63■□□□□ 0.73
TRAPPC11-204ENST00000505676 MAGEF1Q9HAY2 307 aa19.63■□□□□ 0.73
TRAPPC11-204ENST00000505676 ATRNL1Q5VV63 1379 aa19.62■□□□□ 0.73
TRAPPC11-204ENST00000505676 PTGS1P23219 599 aa19.62■□□□□ 0.73
TRAPPC11-204ENST00000505676 EN1Q05925 392 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC11-204ENST00000505676 ZNF543Q08ER8 600 aa19.62■□□□□ 0.73
TRAPPC11-204ENST00000505676 TYW1BQ6NUM6 668 aa19.62■□□□□ 0.73
TRAPPC11-204ENST00000505676 DTHD1Q6ZMT9 781 aa19.62■□□□□ 0.73
TRAPPC11-204ENST00000505676 ENOX1Q8TC92 643 aaKnown RBP19.62■□□□□ 0.73
TRAPPC11-204ENST00000505676 MKL1Q969V6 931 aa19.62■□□□□ 0.73
TRAPPC11-204ENST00000505676 DHX58Q96C10 678 aa19.62■□□□□ 0.73
TRAPPC11-204ENST00000505676 KCNF1Q9H3M0 494 aa19.62■□□□□ 0.73
TRAPPC11-204ENST00000505676 NYAP2Q9P242 653 aa19.62■□□□□ 0.73
TRAPPC11-204ENST00000505676 SMCO2A6NFE2 343 aa19.61■□□□□ 0.73
TRAPPC11-204ENST00000505676 USP17L5A8MUK1 530 aa19.61■□□□□ 0.73
TRAPPC11-204ENST00000505676 NRDCO43847 1150 aa19.61■□□□□ 0.73
TRAPPC11-204ENST00000505676 MXD3Q9BW11 206 aa19.61■□□□□ 0.73
TRAPPC11-204ENST00000505676 KANSL2Q9H9L4 492 aa19.61■□□□□ 0.73
TRAPPC11-204ENST00000505676 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC11-204ENST00000505676 GOLGA8HP0CJ92 632 aa19.61■□□□□ 0.73
TRAPPC11-204ENST00000505676 VEGFAP15692 232 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC11-204ENST00000505676 CHRNA5P30532 468 aa19.61■□□□□ 0.73
TRAPPC11-204ENST00000505676 KIAA0825Q8IV33 1275 aa19.61■□□□□ 0.73
TRAPPC11-204ENST00000505676 CCDC150Q8NCX0 1101 aa19.61■□□□□ 0.73
TRAPPC11-204ENST00000505676 PAGE5Q96GU1 130 aa19.61■□□□□ 0.73
TRAPPC11-204ENST00000505676 EPSTI1Q96J88 318 aa19.61■□□□□ 0.73
TRAPPC11-204ENST00000505676 GTPBP4Q9BZE4 634 aaKnown RBP19.61■□□□□ 0.73
TRAPPC11-204ENST00000505676 CUEDC2Q9H467 287 aa19.61■□□□□ 0.73
TRAPPC11-204ENST00000505676 RMND1Q9NWS8 449 aa19.61■□□□□ 0.73
TRAPPC11-204ENST00000505676 RGS17Q9UGC6 210 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC11-204ENST00000505676 PSME4Q14997 1843 aa19.6■□□□□ 0.73
TRAPPC11-204ENST00000505676 PNMA6FA0A0J9YX94 578 aa19.6■□□□□ 0.73
TRAPPC11-204ENST00000505676 PDILTQ8N807 584 aa19.6■□□□□ 0.73
TRAPPC11-204ENST00000505676 TTLL6Q8N841 843 aa19.6■□□□□ 0.73
TRAPPC11-204ENST00000505676 DCAF4Q8WV16 495 aa19.6■□□□□ 0.73
TRAPPC11-204ENST00000505676 CCSER1Q9C0I3 900 aa19.6■□□□□ 0.73
TRAPPC11-204ENST00000505676 PPIP5K2O43314 1243 aa19.6■□□□□ 0.73
TRAPPC11-204ENST00000505676 RBM5P52756 815 aaKnown RBP eCLIP19.6■□□□□ 0.73
TRAPPC11-204ENST00000505676 E2F4Q16254 413 aa19.6■□□□□ 0.73
TRAPPC11-204ENST00000505676 POTEAQ6S8J7 498 aa19.6■□□□□ 0.73
TRAPPC11-204ENST00000505676 NEK8Q86SG6 692 aa19.6■□□□□ 0.73
TRAPPC11-204ENST00000505676 REXO1Q8N1G1 1221 aaKnown RBP19.6■□□□□ 0.73
TRAPPC11-204ENST00000505676 ZNF830Q96NB3 372 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC11-204ENST00000505676 A0A087WWV3 80 aa19.59■□□□□ 0.73
TRAPPC11-204ENST00000505676 WNT7AO00755 349 aa19.59■□□□□ 0.73
TRAPPC11-204ENST00000505676 AOC3Q16853 763 aa19.59■□□□□ 0.73
TRAPPC11-204ENST00000505676 NOM1Q5C9Z4 860 aaKnown RBP19.59■□□□□ 0.73
TRAPPC11-204ENST00000505676 TATDN1Q6P1N9 297 aa19.59■□□□□ 0.73
TRAPPC11-204ENST00000505676 TMEM179Q6ZVK1 233 aa19.59■□□□□ 0.73
TRAPPC11-204ENST00000505676 USP49Q70CQ1 688 aa19.59■□□□□ 0.73
TRAPPC11-204ENST00000505676 TEX2Q8IWB9 1127 aa19.59■□□□□ 0.73
TRAPPC11-204ENST00000505676 PIGSQ96S52 555 aa19.59■□□□□ 0.73
TRAPPC11-204ENST00000505676 NAP1L4Q99733 375 aaKnown RBP19.59■□□□□ 0.73
TRAPPC11-204ENST00000505676 GTPBP6O43824 516 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC11-204ENST00000505676 TPM2P07951 284 aa19.59■□□□□ 0.73
TRAPPC11-204ENST00000505676 FANCCQ00597 558 aa19.59■□□□□ 0.73
TRAPPC11-204ENST00000505676 NFIAQ12857 509 aa19.59■□□□□ 0.73
TRAPPC11-204ENST00000505676 DPYDQ12882 1025 aa19.59■□□□□ 0.73
TRAPPC11-204ENST00000505676 MCTP2Q6DN12 878 aa19.59■□□□□ 0.73
TRAPPC11-204ENST00000505676 TMOD2Q9NZR1 351 aa19.59■□□□□ 0.73
TRAPPC11-204ENST00000505676 MTMR7Q9Y216 660 aa19.59■□□□□ 0.73
TRAPPC11-204ENST00000505676 ADCY7P51828 1080 aa19.58■□□□□ 0.73
TRAPPC11-204ENST00000505676 CERKLQ49MI3 558 aaPredicted RBP19.58■□□□□ 0.73
TRAPPC11-204ENST00000505676 LRRC8AQ8IWT6 810 aa19.58■□□□□ 0.73
TRAPPC11-204ENST00000505676 LRRC47Q8N1G4 583 aaKnown RBP19.58■□□□□ 0.73
TRAPPC11-204ENST00000505676 FAM198AQ9UFP1 575 aa19.58■□□□□ 0.73
TRAPPC11-204ENST00000505676 HDAC9Q9UKV0 1011 aa19.58■□□□□ 0.73
TRAPPC11-204ENST00000505676 SCN9AQ15858 1988 aa19.58■□□□□ 0.72
TRAPPC11-204ENST00000505676 ADAMTSL1Q8N6G6 1762 aa19.58■□□□□ 0.72
TRAPPC11-204ENST00000505676 PRR29P0C7W0 189 aa19.57■□□□□ 0.72
TRAPPC11-204ENST00000505676 MMP14P50281 582 aa19.57■□□□□ 0.72
TRAPPC11-204ENST00000505676 INF2Q27J81 1249 aa19.57■□□□□ 0.72
TRAPPC11-204ENST00000505676 HOMER1Q86YM7 354 aa19.57■□□□□ 0.72
TRAPPC11-204ENST00000505676 MTMR8Q96EF0 704 aa19.57■□□□□ 0.72
TRAPPC11-204ENST00000505676 NAP1L5Q96NT1 182 aaPredicted RBP19.57■□□□□ 0.72
TRAPPC11-204ENST00000505676 IFNKQ9P0W0 207 aa19.57■□□□□ 0.72
TRAPPC11-204ENST00000505676 MPHOSPH10O00566 681 aaKnown RBP19.57■□□□□ 0.72
TRAPPC11-204ENST00000505676 FOXN1O15353 648 aa19.57■□□□□ 0.72
TRAPPC11-204ENST00000505676 OR52Z1P0C646 297 aa19.57■□□□□ 0.72
TRAPPC11-204ENST00000505676 XPO4Q9C0E2 1151 aaKnown RBP19.57■□□□□ 0.72
TRAPPC11-204ENST00000505676 A0A087X0B3 334 aa19.56■□□□□ 0.72
TRAPPC11-204ENST00000505676 PDXDC2PQ6P474 469 aa19.56■□□□□ 0.72
TRAPPC11-204ENST00000505676 DISC1Q9NRI5 854 aa19.56■□□□□ 0.72
TRAPPC11-204ENST00000505676 HERC5Q9UII4 1024 aaKnown RBP19.56■□□□□ 0.72
TRAPPC11-204ENST00000505676 EP400Q96L91 3159 aa19.56■□□□□ 0.72
TRAPPC11-204ENST00000505676 BAZ2BQ9UIF8 2168 aaKnown RBP19.56■□□□□ 0.72
TRAPPC11-204ENST00000505676 BMP6P22004 513 aa19.56■□□□□ 0.72
TRAPPC11-204ENST00000505676 HOXA7P31268 230 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC11-204ENST00000505676 KCNJ6P48051 423 aa19.56■□□□□ 0.72
TRAPPC11-204ENST00000505676 RASGRP4Q8TDF6 673 aa19.56■□□□□ 0.72
TRAPPC11-204ENST00000505676 RIC8AQ9NPQ8 531 aa19.56■□□□□ 0.72
TRAPPC11-204ENST00000505676 FRMPD2Q68DX3 1309 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 ZBTB5O15062 677 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 SERPINC1P01008 464 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 LMOD1P29536 600 aaPredicted RBP19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 UBA7P41226 1012 aa19.55■□□□□ 0.72
TRAPPC11-204ENST00000505676 MRPL12P52815 198 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms