RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 HDXQ7Z353 690 aa5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 SMYD4Q8IYR2 804 aaPredicted RBP5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 LRRC47Q8N1G4 583 aaKnown RBP5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 WDR89Q96FK6 387 aaPredicted RBP5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 ACSBG1Q96GR2 724 aa5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 C20orf173Q96LM9 149 aa5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 CEP89Q96ST8 783 aa5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 PHAXQ9H814 394 aaKnown RBP5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 PRDM7Q9NQW5 492 aa5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 CACNA2D2Q9NY47 1150 aa5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 GMIPQ9P107 970 aa5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 PCDHA4Q9UN74 947 aa5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 TACC3Q9Y6A5 838 aa5.34□□□□□ -1.55
TRAPPC13-208ENST00000505553 ZNF862O60290 1169 aa5.33□□□□□ -1.56
TRAPPC13-208ENST00000505553 PDGFRBP09619 1106 aa5.33□□□□□ -1.56
TRAPPC13-208ENST00000505553 HCLS1P14317 486 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC13-208ENST00000505553 OXCT1P55809 520 aa5.33□□□□□ -1.56
TRAPPC13-208ENST00000505553 PDE4BQ07343 736 aa5.33□□□□□ -1.56
TRAPPC13-208ENST00000505553 IKZF1Q13422 519 aa5.33□□□□□ -1.56
TRAPPC13-208ENST00000505553 KIF4BQ2VIQ3 1234 aa5.33□□□□□ -1.56
TRAPPC13-208ENST00000505553 DALRD3Q5D0E6 543 aaKnown RBP5.33□□□□□ -1.56
TRAPPC13-208ENST00000505553 FYB2Q5VWT5 728 aa5.33□□□□□ -1.56
TRAPPC13-208ENST00000505553 VHLLQ6RSH7 139 aa5.33□□□□□ -1.56
TRAPPC13-208ENST00000505553 SPATA9Q9BWV2 254 aa5.33□□□□□ -1.56
TRAPPC13-208ENST00000505553 SSU72Q9NP77 194 aaKnown RBP5.33□□□□□ -1.56
TRAPPC13-208ENST00000505553 CD320Q9NPF0 282 aa5.33□□□□□ -1.56
TRAPPC13-208ENST00000505553 CHPF2Q9P2E5 772 aa5.33□□□□□ -1.56
TRAPPC13-208ENST00000505553 PCOLCE2Q9UKZ9 415 aa5.33□□□□□ -1.56
TRAPPC13-208ENST00000505553 B2RBV5 119 aa5.32□□□□□ -1.56
TRAPPC13-208ENST00000505553 GFRA2O00451 464 aa5.32□□□□□ -1.56
TRAPPC13-208ENST00000505553 NUAK1O60285 661 aa5.32□□□□□ -1.56
TRAPPC13-208ENST00000505553 WIPI1Q5MNZ9 446 aaPredicted RBP5.32□□□□□ -1.56
TRAPPC13-208ENST00000505553 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.32□□□□□ -1.56
TRAPPC13-208ENST00000505553 ATG14Q6ZNE5 492 aa5.32□□□□□ -1.56
TRAPPC13-208ENST00000505553 CYFIP1Q7L576 1253 aa5.32□□□□□ -1.56
TRAPPC13-208ENST00000505553 FERMT3Q86UX7 667 aa5.32□□□□□ -1.56
TRAPPC13-208ENST00000505553 PRPF38AQ8NAV1 312 aaKnown RBP5.32□□□□□ -1.56
TRAPPC13-208ENST00000505553 BORCS6Q96GS4 357 aa5.32□□□□□ -1.56
TRAPPC13-208ENST00000505553 DIRC2Q96SL1 478 aa5.32□□□□□ -1.56
TRAPPC13-208ENST00000505553 NSUN3Q9H649 340 aaKnown RBP5.32□□□□□ -1.56
TRAPPC13-208ENST00000505553 ANTXR1Q9H6X2 564 aa5.32□□□□□ -1.56
TRAPPC13-208ENST00000505553 PARD6AQ9NPB6 346 aa5.32□□□□□ -1.56
TRAPPC13-208ENST00000505553 DISC1Q9NRI5 854 aa5.32□□□□□ -1.56
TRAPPC13-208ENST00000505553 PLAGL2Q9UPG8 496 aa5.32□□□□□ -1.56
TRAPPC13-208ENST00000505553 CD2APQ9Y5K6 639 aa5.32□□□□□ -1.56
TRAPPC13-208ENST00000505553 AGRPO00253 132 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 FOXD2O60548 495 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 NME1P15531 152 aaKnown RBP5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 SYN1P17600 705 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 CNGA1P29973 690 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 TTLL4Q14679 1199 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 MRM1Q6IN84 353 aaKnown RBP5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 UNC5AQ6ZN44 842 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 ZBTB38Q8NAP3 1195 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 GPBAR1Q8TDU6 330 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 CHAC2Q8WUX2 184 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 STAG1Q8WVM7 1258 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 NINJ1Q92982 152 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 ATG4CQ96DT6 458 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 MFSD3Q96ES6 412 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 HOMER2Q9NSB8 354 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 REV1Q9UBZ9 1251 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 SLC22A31A6NKX4 558 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 UPK3BL1B0FP48 263 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 UPK3BL2E5RIL1 263 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 TNFRSF10CO14798 259 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 FAM153BP0C7A2 387 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 MED14OSP0DP75 135 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 NAT2P11245 290 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 PLCG1P19174 1290 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 CDCP2Q5VXM1 449 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 OVOS1Q6IE37 1185 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 MPRIPQ6WCQ1 1025 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 NLRC3Q7RTR2 1065 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 NIM1KQ8IY84 436 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 ELMO3Q96BJ8 720 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 PLPPR2Q96GM1 343 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 SGSM3Q96HU1 749 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 PCGF6Q9BYE7 350 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 CNNM2Q9H8M5 875 aa5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 G3BP2Q9UN86 482 aaKnown RBP5.31□□□□□ -1.56
TRAPPC13-208ENST00000505553 SUSD5O60279 629 aa5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 RFPL3O75679 317 aa5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 ITIH2P19823 946 aa5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 GLDCP23378 1020 aa5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 SLC7A5Q01650 507 aa5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 BBS9Q3SYG4 887 aa5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 TM4SF20Q53R12 229 aa5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 CT47A1Q5JQC4 288 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 TMEM201Q5SNT2 666 aa5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 KIAA1211LQ6NV74 962 aa5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 LRFN4Q6PJG9 635 aa5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 CCDC136Q96JN2 1154 aa5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 IPO9Q96P70 1041 aaKnown RBP5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 EPB41L4BQ9H329 900 aa5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 ZCCHC4Q9H5U6 513 aa5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 CAAP1Q9H8G2 361 aa5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 ADAM30Q9UKF2 790 aa5.3□□□□□ -1.56
TRAPPC13-208ENST00000505553 FAN1Q9Y2M0 1017 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms