RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 SYNPO2Q9UMS6 1093 aa19.85■□□□□ 0.77
SYNE4-207ENST00000505054 STX8Q9UNK0 236 aa19.85■□□□□ 0.77
SYNE4-207ENST00000505054 F5H6K3 240 aa19.84■□□□□ 0.77
SYNE4-207ENST00000505054 WDR46O15213 610 aaKnown RBP19.84■□□□□ 0.77
SYNE4-207ENST00000505054 NDUFB10O96000 172 aa19.84■□□□□ 0.77
SYNE4-207ENST00000505054 KLRC3Q07444 240 aa19.84■□□□□ 0.77
SYNE4-207ENST00000505054 CACNB2Q08289 660 aaPredicted RBP19.84■□□□□ 0.77
SYNE4-207ENST00000505054 LRIT3Q3SXY7 679 aa19.84■□□□□ 0.77
SYNE4-207ENST00000505054 PPP4R3BQ5MIZ7 849 aa19.84■□□□□ 0.77
SYNE4-207ENST00000505054 MORN1Q5T089 497 aa19.84■□□□□ 0.77
SYNE4-207ENST00000505054 RCSD1Q6JBY9 416 aa19.84■□□□□ 0.77
SYNE4-207ENST00000505054 POTEEQ6S8J3 1075 aa19.84■□□□□ 0.77
SYNE4-207ENST00000505054 PLEKHH3Q7Z736 793 aa19.84■□□□□ 0.77
SYNE4-207ENST00000505054 TDHQ8IZJ6 230 aa19.84■□□□□ 0.77
SYNE4-207ENST00000505054 ZKSCAN3Q9BRR0 538 aa19.84■□□□□ 0.77
SYNE4-207ENST00000505054 ZSWIM5Q9P217 1185 aa19.84■□□□□ 0.77
SYNE4-207ENST00000505054 RAD21O60216 631 aa19.83■□□□□ 0.77
SYNE4-207ENST00000505054 COL6A1P12109 1028 aa19.83■□□□□ 0.77
SYNE4-207ENST00000505054 Q3C1V9 767 aa19.83■□□□□ 0.77
SYNE4-207ENST00000505054 CYB5R4Q7L1T6 521 aa19.83■□□□□ 0.77
SYNE4-207ENST00000505054 GMCL1P1Q8NEA9 526 aa19.83■□□□□ 0.77
SYNE4-207ENST00000505054 NUP88Q99567 741 aaPredicted RBP19.83■□□□□ 0.77
SYNE4-207ENST00000505054 ZNF236Q9UL36 1845 aa19.83■□□□□ 0.76
SYNE4-207ENST00000505054 REC8O95072 547 aa19.82■□□□□ 0.76
SYNE4-207ENST00000505054 CCL14Q16627 93 aa19.82■□□□□ 0.76
SYNE4-207ENST00000505054 FAM83BQ5T0W9 1011 aa19.82■□□□□ 0.76
SYNE4-207ENST00000505054 TMEM47Q9BQJ4 181 aa19.82■□□□□ 0.76
SYNE4-207ENST00000505054 TANGO6Q9C0B7 1094 aa19.82■□□□□ 0.76
SYNE4-207ENST00000505054 RABGAP1Q9Y3P9 1069 aa19.82■□□□□ 0.76
SYNE4-207ENST00000505054 MYH4Q9Y623 1939 aa19.82■□□□□ 0.76
SYNE4-207ENST00000505054 SPDYE16A6NNV3 312 aaPredicted RBP19.81■□□□□ 0.76
SYNE4-207ENST00000505054 DLL1O00548 723 aa19.81■□□□□ 0.76
SYNE4-207ENST00000505054 TOP1P11387 765 aaKnown RBP19.81■□□□□ 0.76
SYNE4-207ENST00000505054 CCND3P30281 292 aaPredicted RBP19.81■□□□□ 0.76
SYNE4-207ENST00000505054 CCNA1P78396 465 aa19.81■□□□□ 0.76
SYNE4-207ENST00000505054 TRDNQ13061 729 aa19.81■□□□□ 0.76
SYNE4-207ENST00000505054 COL9A3Q14050 684 aaPredicted RBP19.81■□□□□ 0.76
SYNE4-207ENST00000505054 SLFN13Q68D06 897 aa19.81■□□□□ 0.76
SYNE4-207ENST00000505054 RASGRP2Q7LDG7 609 aa19.81■□□□□ 0.76
SYNE4-207ENST00000505054 IQCA1Q86XH1 822 aa19.81■□□□□ 0.76
SYNE4-207ENST00000505054 MB21D2Q8IYB1 491 aaPredicted RBP19.81■□□□□ 0.76
SYNE4-207ENST00000505054 RASEFQ8IZ41 740 aa19.81■□□□□ 0.76
SYNE4-207ENST00000505054 NCOA7Q8NI08 942 aa19.81■□□□□ 0.76
SYNE4-207ENST00000505054 ZSCAN10Q96SZ4 725 aaPredicted RBP19.81■□□□□ 0.76
SYNE4-207ENST00000505054 UBE2OQ9C0C9 1292 aaKnown RBP19.81■□□□□ 0.76
SYNE4-207ENST00000505054 CWC22Q9HCG8 908 aaKnown RBP19.81■□□□□ 0.76
SYNE4-207ENST00000505054 TNKSO95271 1327 aa19.8■□□□□ 0.76
SYNE4-207ENST00000505054 A0A0G2JMZ2 1700 aa19.8■□□□□ 0.76
SYNE4-207ENST00000505054 ANTXR2P58335 489 aa19.8■□□□□ 0.76
SYNE4-207ENST00000505054 MAP2K5Q13163 448 aa19.8■□□□□ 0.76
SYNE4-207ENST00000505054 LHX8Q68G74 356 aa19.8■□□□□ 0.76
SYNE4-207ENST00000505054 RALYLQ86SE5 291 aaKnown RBP19.8■□□□□ 0.76
SYNE4-207ENST00000505054 DGKHQ86XP1 1220 aa19.8■□□□□ 0.76
SYNE4-207ENST00000505054 DEFB123Q8N688 67 aa19.8■□□□□ 0.76
SYNE4-207ENST00000505054 ENAHQ8N8S7 591 aaPredicted RBP19.8■□□□□ 0.76
SYNE4-207ENST00000505054 TTC14Q96N46 770 aa19.8■□□□□ 0.76
SYNE4-207ENST00000505054 FBXO28Q9NVF7 368 aa19.8■□□□□ 0.76
SYNE4-207ENST00000505054 RLFQ13129 1914 aa19.79■□□□□ 0.76
SYNE4-207ENST00000505054 CNMDO75829 334 aa19.79■□□□□ 0.76
SYNE4-207ENST00000505054 FLOT1O75955 427 aa19.79■□□□□ 0.76
SYNE4-207ENST00000505054 RNF20Q5VTR2 975 aa19.79■□□□□ 0.76
SYNE4-207ENST00000505054 LBX2Q6XYB7 198 aa19.79■□□□□ 0.76
SYNE4-207ENST00000505054 ANKS1AQ92625 1134 aa19.79■□□□□ 0.76
SYNE4-207ENST00000505054 KCNB2Q92953 911 aa19.79■□□□□ 0.76
SYNE4-207ENST00000505054 GMCL1Q96IK5 515 aa19.79■□□□□ 0.76
SYNE4-207ENST00000505054 UBAC1Q9BSL1 405 aa19.79■□□□□ 0.76
SYNE4-207ENST00000505054 DSG3P32926 999 aa19.78■□□□□ 0.76
SYNE4-207ENST00000505054 HSPA4P34932 840 aa19.78■□□□□ 0.76
SYNE4-207ENST00000505054 COG2Q14746 738 aa19.78■□□□□ 0.76
SYNE4-207ENST00000505054 SEC23AQ15436 765 aa19.78■□□□□ 0.76
SYNE4-207ENST00000505054 LRRC26Q2I0M4 334 aa19.78■□□□□ 0.76
SYNE4-207ENST00000505054 CCDC178Q5BJE1 867 aa19.78■□□□□ 0.76
SYNE4-207ENST00000505054 CHMP4CQ96CF2 233 aa19.78■□□□□ 0.76
SYNE4-207ENST00000505054 ATG4CQ96DT6 458 aa19.78■□□□□ 0.76
SYNE4-207ENST00000505054 LTBP2Q14767 1821 aa19.78■□□□□ 0.76
SYNE4-207ENST00000505054 SLC15A5A6NIM6 579 aa19.77■□□□□ 0.76
SYNE4-207ENST00000505054 EPB41L2O43491 1005 aaKnown RBP19.77■□□□□ 0.76
SYNE4-207ENST00000505054 MCCP23508 829 aa19.77■□□□□ 0.76
SYNE4-207ENST00000505054 TSGA10IPQ3SY00 556 aa19.77■□□□□ 0.76
SYNE4-207ENST00000505054 MFSD14CQ5VZR4 134 aa19.77■□□□□ 0.76
SYNE4-207ENST00000505054 CHST3Q7LGC8 479 aa19.77■□□□□ 0.76
SYNE4-207ENST00000505054 MTMR7Q9Y216 660 aa19.77■□□□□ 0.76
SYNE4-207ENST00000505054 PARP14Q460N5 1801 aa19.76■□□□□ 0.75
SYNE4-207ENST00000505054 BMP3P12645 472 aa19.76■□□□□ 0.75
SYNE4-207ENST00000505054 SLC1A4P43007 532 aa19.76■□□□□ 0.75
SYNE4-207ENST00000505054 ADCK5Q3MIX3 580 aa19.76■□□□□ 0.75
SYNE4-207ENST00000505054 WDR78Q5VTH9 848 aa19.76■□□□□ 0.75
SYNE4-207ENST00000505054 Q7L0L9 218 aa19.76■□□□□ 0.75
SYNE4-207ENST00000505054 USP26Q9BXU7 913 aa19.76■□□□□ 0.75
SYNE4-207ENST00000505054 HOXC10Q9NYD6 342 aa19.76■□□□□ 0.75
SYNE4-207ENST00000505054 BTBD7Q9P203 1132 aa19.76■□□□□ 0.75
SYNE4-207ENST00000505054 PPP1R9AQ9ULJ8 1098 aa19.76■□□□□ 0.75
SYNE4-207ENST00000505054 STXBP5LQ9Y2K9 1186 aa19.76■□□□□ 0.75
SYNE4-207ENST00000505054 IVNS1ABPQ9Y6Y0 642 aa19.76■□□□□ 0.75
SYNE4-207ENST00000505054 DNAH12Q6ZR08 3092 aa19.75■□□□□ 0.75
SYNE4-207ENST00000505054 MSCO60682 206 aa19.75■□□□□ 0.75
SYNE4-207ENST00000505054 SNHG28P0DPA3 235 aa19.75■□□□□ 0.75
SYNE4-207ENST00000505054 PDHBP11177 359 aa19.75■□□□□ 0.75
SYNE4-207ENST00000505054 PTPREP23469 700 aa19.75■□□□□ 0.75
SYNE4-207ENST00000505054 GRB14Q14449 540 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 4107.7 ms