RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 RGS2P41220 211 aa10.37□□□□□ -0.75
CDH6-202ENST00000504835 RPIAP49247 311 aa10.37□□□□□ -0.75
CDH6-202ENST00000504835 OS9Q13438 667 aaPredicted RBP10.37□□□□□ -0.75
CDH6-202ENST00000504835 ZKSCAN2Q63HK3 967 aa10.37□□□□□ -0.75
CDH6-202ENST00000504835 TDHQ8IZJ6 230 aa10.37□□□□□ -0.75
CDH6-202ENST00000504835 SPSB2Q99619 263 aa10.37□□□□□ -0.75
CDH6-202ENST00000504835 APBA2Q99767 749 aa10.37□□□□□ -0.75
CDH6-202ENST00000504835 TRIM34Q9BYJ4 488 aa10.37□□□□□ -0.75
CDH6-202ENST00000504835 BTBD7Q9P203 1132 aa10.37□□□□□ -0.75
CDH6-202ENST00000504835 CDH23Q9H251 3354 aa10.36□□□□□ -0.75
CDH6-202ENST00000504835 DLL1O00548 723 aa10.36□□□□□ -0.75
CDH6-202ENST00000504835 IGSF3O75054 1194 aa10.36□□□□□ -0.75
CDH6-202ENST00000504835 CD2BP2O95400 341 aaKnown RBP10.36□□□□□ -0.75
CDH6-202ENST00000504835 IGHA2P01877 340 aa10.36□□□□□ -0.75
CDH6-202ENST00000504835 SHMT1P34896 483 aa10.36□□□□□ -0.75
CDH6-202ENST00000504835 MAP2K5Q13163 448 aa10.36□□□□□ -0.75
CDH6-202ENST00000504835 PDE3AQ14432 1141 aa10.36□□□□□ -0.75
CDH6-202ENST00000504835 CATSPERGQ6ZRH7 1159 aa10.36□□□□□ -0.75
CDH6-202ENST00000504835 TRMT44Q8IYL2 757 aaKnown RBP10.36□□□□□ -0.75
CDH6-202ENST00000504835 MAGEB6Q8N7X4 407 aa10.36□□□□□ -0.75
CDH6-202ENST00000504835 NPLOC4Q8TAT6 608 aa10.36□□□□□ -0.75
CDH6-202ENST00000504835 GTF3C2Q8WUA4 911 aaPredicted RBP10.36□□□□□ -0.75
CDH6-202ENST00000504835 EHD4Q9H223 541 aa10.36□□□□□ -0.75
CDH6-202ENST00000504835 RABGAP1Q9Y3P9 1069 aa10.36□□□□□ -0.75
CDH6-202ENST00000504835 USP17L15C9J2P7 530 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 USP17L13C9JLJ4 530 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 USP17L11C9JVI0 530 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 USP17L18D6R9N7 530 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 USP17L22D6RA61 530 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 USP17L17D6RBQ6 530 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 USP17L19D6RCP7 530 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 USP17L20D6RJB6 530 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 IDH1O75874 414 aaKnown RBP10.35□□□□□ -0.75
CDH6-202ENST00000504835 VCAM1P19320 739 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 PLCD1P51178 756 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 INSM1Q01101 510 aaPredicted RBP10.35□□□□□ -0.75
CDH6-202ENST00000504835 USP17L24Q0WX57 530 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 CYP4X1Q8N118 509 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 DEFB123Q8N688 67 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 TRPV1Q8NER1 839 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 RIOK1Q9BRS2 568 aaKnown RBP10.35□□□□□ -0.75
CDH6-202ENST00000504835 UBE2OQ9C0C9 1292 aaKnown RBP10.35□□□□□ -0.75
CDH6-202ENST00000504835 KIAA1683Q9H0B3 1180 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 SERPINB13Q9UIV8 391 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 GREB1LQ9C091 1923 aaPredicted RBP10.35□□□□□ -0.75
CDH6-202ENST00000504835 USP5P45974 858 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 GABPAQ06546 454 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 GRB14Q14449 540 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 RAB3GAP1Q15042 981 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 LBX2Q6XYB7 198 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 EDC3Q96F86 508 aaKnown RBP10.35□□□□□ -0.75
CDH6-202ENST00000504835 FEZ1Q99689 392 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 MTMR10Q9NXD2 777 aa10.35□□□□□ -0.75
CDH6-202ENST00000504835 VCANP13611 3396 aa10.34□□□□□ -0.75
CDH6-202ENST00000504835 A0A1W2PRG0 241 aa10.34□□□□□ -0.75
CDH6-202ENST00000504835 SLC15A5A6NIM6 579 aa10.34□□□□□ -0.75
CDH6-202ENST00000504835 HOXC6P09630 235 aa10.34□□□□□ -0.75
CDH6-202ENST00000504835 MDM2Q00987 491 aaPredicted RBP10.34□□□□□ -0.75
CDH6-202ENST00000504835 ABCB5Q2M3G0 1257 aa10.34□□□□□ -0.75
CDH6-202ENST00000504835 CERKLQ49MI3 558 aaPredicted RBP10.34□□□□□ -0.75
CDH6-202ENST00000504835 KIAA1755Q5JYT7 1200 aa10.34□□□□□ -0.75
CDH6-202ENST00000504835 CEP85Q6P2H3 762 aa10.34□□□□□ -0.75
CDH6-202ENST00000504835 EXOC6BQ9Y2D4 811 aa10.34□□□□□ -0.75
CDH6-202ENST00000504835 MCM3APO60318 1980 aa10.34□□□□□ -0.75
CDH6-202ENST00000504835 MYH4Q9Y623 1939 aa10.33□□□□□ -0.76
CDH6-202ENST00000504835 CYP2C19P33261 490 aa10.33□□□□□ -0.76
CDH6-202ENST00000504835 USP14P54578 494 aa10.33□□□□□ -0.76
CDH6-202ENST00000504835 SEPT2Q15019 361 aa10.33□□□□□ -0.76
CDH6-202ENST00000504835 ITPRIPQ8IWB1 547 aa10.33□□□□□ -0.76
CDH6-202ENST00000504835 CCAR1Q8IX12 1150 aaKnown RBP10.33□□□□□ -0.76
CDH6-202ENST00000504835 RPAP3Q9H6T3 665 aaPredicted RBP10.33□□□□□ -0.76
CDH6-202ENST00000504835 TOR4AQ9NXH8 423 aa10.33□□□□□ -0.76
CDH6-202ENST00000504835 GMPR2Q9P2T1 348 aaKnown RBP10.33□□□□□ -0.76
CDH6-202ENST00000504835 DDX20Q9UHI6 824 aaKnown RBP10.33□□□□□ -0.76
CDH6-202ENST00000504835 STXBP5LQ9Y2K9 1186 aa10.33□□□□□ -0.76
CDH6-202ENST00000504835 CYBAP13498 195 aa10.32□□□□□ -0.76
CDH6-202ENST00000504835 CCNA1P78396 465 aa10.32□□□□□ -0.76
CDH6-202ENST00000504835 WDR78Q5VTH9 848 aa10.32□□□□□ -0.76
CDH6-202ENST00000504835 TTC6Q86TZ1 520 aa10.32□□□□□ -0.76
CDH6-202ENST00000504835 AACSQ86V21 672 aa10.32□□□□□ -0.76
CDH6-202ENST00000504835 CERS3Q8IU89 383 aa10.32□□□□□ -0.76
CDH6-202ENST00000504835 SENP6Q9GZR1 1112 aaPredicted RBP10.32□□□□□ -0.76
CDH6-202ENST00000504835 SPTBN5Q9NRC6 3674 aaKnown RBP10.32□□□□□ -0.76
CDH6-202ENST00000504835 MAGEB6P1A0A0J9YX57 407 aa10.31□□□□□ -0.76
CDH6-202ENST00000504835 TCRBV5S4A2TA0A5A2 114 aa10.31□□□□□ -0.76
CDH6-202ENST00000504835 SMIM22K7EJ46 135 aa10.31□□□□□ -0.76
CDH6-202ENST00000504835 WIPF1O43516 503 aa10.31□□□□□ -0.76
CDH6-202ENST00000504835 CYP2D6P10635 497 aa10.31□□□□□ -0.76
CDH6-202ENST00000504835 PDE6AP16499 860 aa10.31□□□□□ -0.76
CDH6-202ENST00000504835 MLLT3P42568 568 aaPredicted RBP10.31□□□□□ -0.76
CDH6-202ENST00000504835 SMCPP49901 116 aaPredicted RBP10.31□□□□□ -0.76
CDH6-202ENST00000504835 MAP3K12Q12852 859 aa10.31□□□□□ -0.76
CDH6-202ENST00000504835 MFSD14CQ5VZR4 134 aa10.31□□□□□ -0.76
CDH6-202ENST00000504835 SIAH1Q8IUQ4 282 aa10.31□□□□□ -0.76
CDH6-202ENST00000504835 SLC44A5Q8NCS7 719 aa10.31□□□□□ -0.76
CDH6-202ENST00000504835 LPAR1Q92633 364 aa10.31□□□□□ -0.76
CDH6-202ENST00000504835 GUCD1Q96NT3 240 aa10.31□□□□□ -0.76
CDH6-202ENST00000504835 MOV10L1Q9BXT6 1211 aaKnown RBP10.31□□□□□ -0.76
CDH6-202ENST00000504835 CWC22Q9HCG8 908 aaKnown RBP10.31□□□□□ -0.76
CDH6-202ENST00000504835 IL1RAPL2Q9NP60 686 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms