RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 BMP3P12645 472 aa30■■■□□ 2.39
PVT1-201ENST00000504719 CYP2C19P33261 490 aa30■■■□□ 2.39
PVT1-201ENST00000504719 CWC27Q6UX04 472 aaKnown RBP30■■■□□ 2.39
PVT1-201ENST00000504719 MMP19Q99542 508 aa30■■■□□ 2.39
PVT1-201ENST00000504719 STX8Q9UNK0 236 aa30■■■□□ 2.39
PVT1-201ENST00000504719 NOVP48745 357 aa29.99■■■□□ 2.39
PVT1-201ENST00000504719 KIFC2Q96AC6 838 aa29.99■■■□□ 2.39
PVT1-201ENST00000504719 GMCL1Q96IK5 515 aa29.99■■■□□ 2.39
PVT1-201ENST00000504719 TEX13BQ9BXU2 312 aa29.99■■■□□ 2.39
PVT1-201ENST00000504719 H0YGN5 161 aa29.98■■■□□ 2.39
PVT1-201ENST00000504719 ATP2A1O14983 1001 aa29.98■■■□□ 2.39
PVT1-201ENST00000504719 ZBED4O75132 1171 aa29.98■■■□□ 2.39
PVT1-201ENST00000504719 HAND2P61296 217 aa29.98■■■□□ 2.39
PVT1-201ENST00000504719 TOMM22Q9NS69 142 aa29.98■■■□□ 2.39
PVT1-201ENST00000504719 RRP12Q5JTH9 1297 aaKnown RBP29.97■■■□□ 2.39
PVT1-201ENST00000504719 SNRNP48Q6IEG0 339 aaKnown RBP29.97■■■□□ 2.39
PVT1-201ENST00000504719 TRPV1Q8NER1 839 aa29.97■■■□□ 2.39
PVT1-201ENST00000504719 MAML3Q96JK9 1138 aa29.97■■■□□ 2.39
PVT1-201ENST00000504719 NBPF3Q9H094 633 aa29.97■■■□□ 2.39
PVT1-201ENST00000504719 SLC38A10Q9HBR0 1119 aa29.97■■■□□ 2.39
PVT1-201ENST00000504719 CYBAP13498 195 aa29.96■■■□□ 2.39
PVT1-201ENST00000504719 KCTD2Q14681 263 aa29.96■■■□□ 2.39
PVT1-201ENST00000504719 TCP11L1Q9NUJ3 509 aa29.96■■■□□ 2.39
PVT1-201ENST00000504719 RIPK3Q9Y572 518 aa29.96■■■□□ 2.39
PVT1-201ENST00000504719 CTDP1Q9Y5B0 961 aaPredicted RBP29.96■■■□□ 2.39
PVT1-201ENST00000504719 LAMA4Q16363 1823 aa29.96■■■□□ 2.39
PVT1-201ENST00000504719 TMEM232C9JQI7 657 aa29.95■■■□□ 2.39
PVT1-201ENST00000504719 MCCP23508 829 aa29.95■■■□□ 2.39
PVT1-201ENST00000504719 SLC1A4P43007 532 aa29.95■■■□□ 2.39
PVT1-201ENST00000504719 AKNAD1Q5T1N1 836 aa29.95■■■□□ 2.39
PVT1-201ENST00000504719 CPXCR1Q8N123 301 aa29.95■■■□□ 2.39
PVT1-201ENST00000504719 STAG1Q8WVM7 1258 aa29.95■■■□□ 2.39
PVT1-201ENST00000504719 DDX20Q9UHI6 824 aaKnown RBP29.95■■■□□ 2.39
PVT1-201ENST00000504719 PCP11498 1178 aaKnown RBP29.94■■■□□ 2.38
PVT1-201ENST00000504719 CNGA1P29973 690 aa29.94■■■□□ 2.38
PVT1-201ENST00000504719 STAT2P52630 851 aa29.94■■■□□ 2.38
PVT1-201ENST00000504719 ZNF792Q3KQV3 632 aa29.94■■■□□ 2.38
PVT1-201ENST00000504719 FAM160B2Q86V87 743 aa29.94■■■□□ 2.38
PVT1-201ENST00000504719 SKAP1Q86WV1 359 aa29.94■■■□□ 2.38
PVT1-201ENST00000504719 C11orf49Q9H6J7 331 aa29.94■■■□□ 2.38
PVT1-201ENST00000504719 RAVER2Q9HCJ3 691 aaKnown RBP29.94■■■□□ 2.38
PVT1-201ENST00000504719 DIS3Q9Y2L1 958 aaKnown RBP29.94■■■□□ 2.38
PVT1-201ENST00000504719 MSCO60682 206 aa29.93■■■□□ 2.38
PVT1-201ENST00000504719 PLA2G6O60733 806 aa29.93■■■□□ 2.38
PVT1-201ENST00000504719 PGK2P07205 417 aa29.93■■■□□ 2.38
PVT1-201ENST00000504719 FDX1P10109 184 aa29.93■■■□□ 2.38
PVT1-201ENST00000504719 OAZ1P54368 228 aa29.93■■■□□ 2.38
PVT1-201ENST00000504719 RCSD1Q6JBY9 416 aa29.93■■■□□ 2.38
PVT1-201ENST00000504719 MFSD6Q6ZSS7 791 aa29.93■■■□□ 2.38
PVT1-201ENST00000504719 TBC1D10CQ8IV04 446 aa29.93■■■□□ 2.38
PVT1-201ENST00000504719 CHURC1Q8WUH1 139 aa29.93■■■□□ 2.38
PVT1-201ENST00000504719 CHMP4CQ96CF2 233 aa29.93■■■□□ 2.38
PVT1-201ENST00000504719 ISY1Q9ULR0 285 aaKnown RBP29.93■■■□□ 2.38
PVT1-201ENST00000504719 NR2E3Q9Y5X4 410 aa29.93■■■□□ 2.38
PVT1-201ENST00000504719 DSCC1Q9BVC3 393 aa29.92■■■□□ 2.38
PVT1-201ENST00000504719 RNF41Q9H4P4 317 aaPredicted RBP29.92■■■□□ 2.38
PVT1-201ENST00000504719 ZNF213O14771 459 aa29.91■■■□□ 2.38
PVT1-201ENST00000504719 EVI5O60447 810 aa29.91■■■□□ 2.38
PVT1-201ENST00000504719 KCTD1Q719H9 257 aa29.91■■■□□ 2.38
PVT1-201ENST00000504719 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.91■■■□□ 2.38
PVT1-201ENST00000504719 CEP290O15078 2479 aa29.91■■■□□ 2.38
PVT1-201ENST00000504719 SMCHD1A6NHR9 2005 aa29.9■■■□□ 2.38
PVT1-201ENST00000504719 SLC4A3P48751 1232 aa29.9■■■□□ 2.38
PVT1-201ENST00000504719 PRAMEF19Q5SWL8 479 aa29.9■■■□□ 2.38
PVT1-201ENST00000504719 TMEM47Q9BQJ4 181 aa29.9■■■□□ 2.38
PVT1-201ENST00000504719 TOP1P11387 765 aaKnown RBP29.89■■■□□ 2.38
PVT1-201ENST00000504719 COL6A1P12109 1028 aa29.89■■■□□ 2.38
PVT1-201ENST00000504719 IKQ13123 557 aaPredicted RBP29.89■■■□□ 2.38
PVT1-201ENST00000504719 ERICH6BQ5W0A0 696 aa29.89■■■□□ 2.38
PVT1-201ENST00000504719 RASGRP2Q7LDG7 609 aa29.89■■■□□ 2.38
PVT1-201ENST00000504719 DCAF4Q8WV16 495 aa29.89■■■□□ 2.38
PVT1-201ENST00000504719 PFASO15067 1338 aa29.89■■■□□ 2.38
PVT1-201ENST00000504719 SEPT4O43236 478 aa29.88■■■□□ 2.37
PVT1-201ENST00000504719 HABP4Q5JVS0 413 aaKnown RBP29.88■■■□□ 2.37
PVT1-201ENST00000504719 CHST13Q8NET6 341 aa29.88■■■□□ 2.37
PVT1-201ENST00000504719 TINF2Q9BSI4 451 aa29.88■■■□□ 2.37
PVT1-201ENST00000504719 IL25Q9H293 177 aa29.88■■■□□ 2.37
PVT1-201ENST00000504719 COLQQ9Y215 455 aaPredicted RBP29.88■■■□□ 2.37
PVT1-201ENST00000504719 MTMR7Q9Y216 660 aa29.88■■■□□ 2.37
PVT1-201ENST00000504719 NEDD4P46934 1319 aa29.88■■■□□ 2.37
PVT1-201ENST00000504719 DNAJC25-GNG10A0A024R161 153 aa29.87■■■□□ 2.37
PVT1-201ENST00000504719 ESR2Q92731 530 aa29.87■■■□□ 2.37
PVT1-201ENST00000504719 DDX11Q96FC9 970 aa29.87■■■□□ 2.37
PVT1-201ENST00000504719 TTC14Q96N46 770 aa29.87■■■□□ 2.37
PVT1-201ENST00000504719 FBXO40Q9UH90 709 aa29.87■■■□□ 2.37
PVT1-201ENST00000504719 NRBP1Q9UHY1 535 aa29.87■■■□□ 2.37
PVT1-201ENST00000504719 ZNF536O15090 1300 aa29.87■■■□□ 2.37
PVT1-201ENST00000504719 NT5C2P49902 561 aa29.86■■■□□ 2.37
PVT1-201ENST00000504719 PPP4R2Q9NY27 417 aa29.86■■■□□ 2.37
PVT1-201ENST00000504719 PRR12Q9ULL5 1215 aa29.86■■■□□ 2.37
PVT1-201ENST00000504719 CCDC96Q2M329 555 aa29.85■■■□□ 2.37
PVT1-201ENST00000504719 CTNNA3Q9UI47 895 aa29.85■■■□□ 2.37
PVT1-201ENST00000504719 SLC34A2O95436 690 aa29.84■■■□□ 2.37
PVT1-201ENST00000504719 ANO1Q5XXA6 986 aa29.84■■■□□ 2.37
PVT1-201ENST00000504719 ANKRD35Q8N283 1001 aa29.84■■■□□ 2.37
PVT1-201ENST00000504719 MSL3Q8N5Y2 521 aaKnown RBP29.84■■■□□ 2.37
PVT1-201ENST00000504719 AGBL1Q96MI9 1066 aa29.84■■■□□ 2.37
PVT1-201ENST00000504719 RAD50Q92878 1312 aa29.83■■■□□ 2.37
PVT1-201ENST00000504719 CHMLP26374 656 aa29.83■■■□□ 2.37
PVT1-201ENST00000504719 IMMTQ16891 758 aaKnown RBP29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms