RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 GAS2O43903 313 aaKnown RBP7.74□□□□□ -1.17
COL4A5-207ENST00000504541 CTSBP07858 339 aa7.74□□□□□ -1.17
COL4A5-207ENST00000504541 HOXB7P09629 217 aa7.74□□□□□ -1.17
COL4A5-207ENST00000504541 PHKG2P15735 406 aa7.74□□□□□ -1.17
COL4A5-207ENST00000504541 HSPA1LP34931 641 aa7.74□□□□□ -1.17
COL4A5-207ENST00000504541 USP11P51784 963 aa7.74□□□□□ -1.17
COL4A5-207ENST00000504541 DOC2BQ14184 412 aa7.74□□□□□ -1.17
COL4A5-207ENST00000504541 VPS72Q15906 364 aa7.74□□□□□ -1.17
COL4A5-207ENST00000504541 LCE1DQ5T752 114 aa7.74□□□□□ -1.17
COL4A5-207ENST00000504541 ZNF530Q6P9A1 599 aaPredicted RBP7.74□□□□□ -1.17
COL4A5-207ENST00000504541 SMG8Q8ND04 991 aaKnown RBP7.74□□□□□ -1.17
COL4A5-207ENST00000504541 TP53INP1Q96A56 240 aa7.74□□□□□ -1.17
COL4A5-207ENST00000504541 KRT82Q9NSB4 513 aa7.74□□□□□ -1.17
COL4A5-207ENST00000504541 SUPT16HQ9Y5B9 1047 aaKnown RBP7.74□□□□□ -1.17
COL4A5-207ENST00000504541 LMO7Q8WWI1 1683 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 SLIT2O94813 1529 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 PHLPP1O60346 1717 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 SCO2A0A1W2PP80 73 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 UNCXA6NJT0 531 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 AOC2O75106 756 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 VAMP4O75379 141 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 DRD2P14416 443 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 GBP2P32456 591 aaPredicted RBP7.73□□□□□ -1.17
COL4A5-207ENST00000504541 RARSP54136 660 aaKnown RBP7.73□□□□□ -1.17
COL4A5-207ENST00000504541 MCM10Q7L590 875 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 DYMQ7RTS9 669 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 USHBP1Q8N6Y0 703 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 ARHGAP45Q92619 1136 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 GGT7Q9UJ14 662 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 LTN1O94822 1766 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 SPATA31A1Q5TZJ5 1347 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 SPATA31A5Q5VU36 1347 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 SPATA31A7Q8IWB4 1347 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 PCDH11XQ9BZA7 1347 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 PCDH11YQ9BZA8 1340 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 FANCIQ9NVI1 1328 aa7.73□□□□□ -1.17
COL4A5-207ENST00000504541 COL14A1Q05707 1796 aaKnown RBP7.72□□□□□ -1.17
COL4A5-207ENST00000504541 MINDY4BA8MYZ0 360 aa7.72□□□□□ -1.17
COL4A5-207ENST00000504541 IPO8O15397 1037 aaKnown RBP7.72□□□□□ -1.17
COL4A5-207ENST00000504541 LIG3P49916 1009 aa7.72□□□□□ -1.17
COL4A5-207ENST00000504541 SOX4Q06945 474 aaPredicted RBP7.72□□□□□ -1.17
COL4A5-207ENST00000504541 TEFQ10587 303 aa7.72□□□□□ -1.17
COL4A5-207ENST00000504541 PWP1Q13610 501 aa7.72□□□□□ -1.17
COL4A5-207ENST00000504541 HS2ST1Q7LGA3 356 aa7.72□□□□□ -1.17
COL4A5-207ENST00000504541 PDZD3Q86UT5 571 aa7.72□□□□□ -1.17
COL4A5-207ENST00000504541 GPBAR1Q8TDU6 330 aa7.72□□□□□ -1.17
COL4A5-207ENST00000504541 WDR89Q96FK6 387 aaPredicted RBP7.72□□□□□ -1.17
COL4A5-207ENST00000504541 MEGF10Q96KG7 1140 aa7.72□□□□□ -1.17
COL4A5-207ENST00000504541 UBL7Q96S82 380 aaPredicted RBP7.72□□□□□ -1.17
COL4A5-207ENST00000504541 SUGCTQ9HAC7 445 aa7.72□□□□□ -1.17
COL4A5-207ENST00000504541 AP4E1Q9UPM8 1137 aa7.72□□□□□ -1.17
COL4A5-207ENST00000504541 FAM208AQ9UK61 1670 aaKnown RBP7.72□□□□□ -1.17
COL4A5-207ENST00000504541 F6X3S4 739 aa7.71□□□□□ -1.18
COL4A5-207ENST00000504541 CYP27B1O15528 508 aa7.71□□□□□ -1.18
COL4A5-207ENST00000504541 ZNF862O60290 1169 aa7.71□□□□□ -1.18
COL4A5-207ENST00000504541 TRIM37O94972 964 aa7.71□□□□□ -1.18
COL4A5-207ENST00000504541 VAMP1P23763 118 aa7.71□□□□□ -1.18
COL4A5-207ENST00000504541 RXRBP28702 533 aa7.71□□□□□ -1.18
COL4A5-207ENST00000504541 ZNF76P36508 570 aa7.71□□□□□ -1.18
COL4A5-207ENST00000504541 RPS26P62854 115 aaKnown RBP7.71□□□□□ -1.18
COL4A5-207ENST00000504541 EXOSC9Q06265 439 aaKnown RBP7.71□□□□□ -1.18
COL4A5-207ENST00000504541 ZNF252P-AS1Q0IIN9 211 aa7.71□□□□□ -1.18
COL4A5-207ENST00000504541 DCTN1Q14203 1278 aa7.71□□□□□ -1.18
COL4A5-207ENST00000504541 MPRIPQ6WCQ1 1025 aa7.71□□□□□ -1.18
COL4A5-207ENST00000504541 JARID2Q92833 1246 aaPredicted RBP7.71□□□□□ -1.18
COL4A5-207ENST00000504541 UTP4Q969X6 686 aaKnown RBP7.71□□□□□ -1.18
COL4A5-207ENST00000504541 RSRP1Q9BUV0 290 aa7.71□□□□□ -1.18
COL4A5-207ENST00000504541 WDR18Q9BV38 432 aa7.71□□□□□ -1.18
COL4A5-207ENST00000504541 SLC52A2Q9HAB3 445 aa7.71□□□□□ -1.18
COL4A5-207ENST00000504541 LGR6Q9HBX8 967 aa7.71□□□□□ -1.18
COL4A5-207ENST00000504541 PICK1Q9NRD5 415 aa7.71□□□□□ -1.18
COL4A5-207ENST00000504541 TSPYL4Q9UJ04 414 aa7.71□□□□□ -1.18
COL4A5-207ENST00000504541 PCDHA4Q9UN74 947 aa7.71□□□□□ -1.18
COL4A5-207ENST00000504541 SCAMP3O14828 347 aaKnown RBP7.7□□□□□ -1.18
COL4A5-207ENST00000504541 RRP1P56182 461 aaKnown RBP7.7□□□□□ -1.18
COL4A5-207ENST00000504541 TWISTNBQ3B726 338 aaPredicted RBP7.7□□□□□ -1.18
COL4A5-207ENST00000504541 AGMOQ6ZNB7 445 aa7.7□□□□□ -1.18
COL4A5-207ENST00000504541 DZIP1LQ8IYY4 767 aaKnown RBP7.7□□□□□ -1.18
COL4A5-207ENST00000504541 RNF34Q969K3 372 aa7.7□□□□□ -1.18
COL4A5-207ENST00000504541 THUMPD2Q9BTF0 503 aaKnown RBP7.7□□□□□ -1.18
COL4A5-207ENST00000504541 MIR1-1HGQ9H1L0 117 aa7.7□□□□□ -1.18
COL4A5-207ENST00000504541 KCNF1Q9H3M0 494 aa7.7□□□□□ -1.18
COL4A5-207ENST00000504541 KIAA1522Q9P206 1035 aaPredicted RBP7.7□□□□□ -1.18
COL4A5-207ENST00000504541 TLR6Q9Y2C9 796 aa7.7□□□□□ -1.18
COL4A5-207ENST00000504541 LAS1LQ9Y4W2 734 aaKnown RBP7.7□□□□□ -1.18
COL4A5-207ENST00000504541 HEG1Q9ULI3 1381 aa7.7□□□□□ -1.18
COL4A5-207ENST00000504541 DISP2A7MBM2 1401 aa7.69□□□□□ -1.18
COL4A5-207ENST00000504541 BCL9LQ86UU0 1499 aa7.69□□□□□ -1.18
COL4A5-207ENST00000504541 DHX15O43143 795 aaKnown RBP7.69□□□□□ -1.18
COL4A5-207ENST00000504541 ADH5P11766 374 aa7.69□□□□□ -1.18
COL4A5-207ENST00000504541 BMP3P12645 472 aa7.69□□□□□ -1.18
COL4A5-207ENST00000504541 ASPAP45381 313 aa7.69□□□□□ -1.18
COL4A5-207ENST00000504541 PREPP48147 710 aa7.69□□□□□ -1.18
COL4A5-207ENST00000504541 EIF4A1P60842 406 aaKnown RBP7.69□□□□□ -1.18
COL4A5-207ENST00000504541 ID3Q02535 119 aa7.69□□□□□ -1.18
COL4A5-207ENST00000504541 ARTNQ5T4W7 220 aa7.69□□□□□ -1.18
COL4A5-207ENST00000504541 RASIP1Q5U651 963 aa7.69□□□□□ -1.18
COL4A5-207ENST00000504541 Q6ZS46 218 aa7.69□□□□□ -1.18
COL4A5-207ENST00000504541 TSR2Q969E8 191 aaKnown RBP7.69□□□□□ -1.18
COL4A5-207ENST00000504541 TMEM74Q96NL1 305 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms